| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is est [H]
Identifier: 89052878
GI number: 89052878
Start: 391364
End: 392284
Strand: Reverse
Name: est [H]
Synonym: Jann_0387
Alternate gene names: 89052878
Gene position: 392284-391364 (Counterclockwise)
Preceding gene: 89052879
Following gene: 89052876
Centisome position: 9.08
GC content: 66.45
Gene sequence:
>921_bases ATGGGCGATACGGCCCCCTATCCCGGCCTCGCCCCGGACCTTTGGGATCTGGCGCGCGAGATGGCCGCCGACCCCGACCC GGTGCCCGAGCATCTGCGCCCGATATCCCAGCTCCGCGCTGCGGTGGCGCGGATGGAGGCGGCGCTGCCACCCGTTCCTG ACGATATTCAGACCCGCGACTGGACGATGGACGTGGCTGGCCGCGCGGTGCCCCTACGGAGCTATCAGACGGCAGACGCC CGCGCAGCGGCGATGCTCTATATCCATGGTGGCGGGTGGAGCCTTGGGTCCATCCGAGGTCACGACCTCATCTGCGCAGA TATCGCGCGGGACACTGGGCTGCGGGTGGTCAGCATCGATTACGCGTTGGCGCCGGAACATCCCTACCCGGCAGCGCTGA CCGAATGTGTGGCGGTGTTTCAGCATCTTCGCACGGGCGCGTCACCTTTGGAGACGGTTCCGGGCCTCTGGCTTGGTGGG GACAGCGCGGGCGGCAACCTTGCCCTTGGGGCCGCGCTGAAGACGAAAGGTGCGGCAGGGTTGTTCCTGATCTATCCGGC AACGGACCCGACATGCGGTGCCGACAGCTACACAACCCATGCCAATGCCCCCTACCTCAGTCGCGACATGATGCACCGCT GCTGGCGTGACTATCTGGGCGGGCAATCACCCGACATCTATACGAGCCCCAACACGGCAGACCTGCGGTCTTTGCCCCAG GCCGTCATTCTGACGGCGACGCTCGACCCGCTCCTCGGTGACGGCGAAGAACTCGCCGCCACTTTCCTCGCGGCGGGCAC ACCCGTCTGGTATGAGACGGCCTCCGGCCTCATCCATGGCTTTTTGCGCTTTCGCGCCATCTCGCCCGCCTCGGATGCCG CCTTTCGGCGAGCCACTGCAGCCCTTGCCGTCCGCCTTTAA
Upstream 100 bases:
>100_bases CACGCTTGGCAACCAGATGGTGTCCGAGCTGCTGATCAAGAACATCGCGCGGCGCGGGTATATTCTGGCGATCGACAAAG ACGTCATCAAGATGATGTAG
Downstream 100 bases:
>100_bases CGCAAAACGGGGCAGCCCTTGGCCACCCCGCTTCACGAGTCTCAATCAGTCGCGCCTCAGCAGTAAGGCGCACCGCGACC GGCACCCGGCGCATCGGTCC
Product: alpha/beta hydrolase fold-3 protein
Products: alcohol; a carboxylate [C]
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MGDTAPYPGLAPDLWDLAREMAADPDPVPEHLRPISQLRAAVARMEAALPPVPDDIQTRDWTMDVAGRAVPLRSYQTADA RAAAMLYIHGGGWSLGSIRGHDLICADIARDTGLRVVSIDYALAPEHPYPAALTECVAVFQHLRTGASPLETVPGLWLGG DSAGGNLALGAALKTKGAAGLFLIYPATDPTCGADSYTTHANAPYLSRDMMHRCWRDYLGGQSPDIYTSPNTADLRSLPQ AVILTATLDPLLGDGEELAATFLAAGTPVWYETASGLIHGFLRFRAISPASDAAFRRATAALAVRL
Sequences:
>Translated_306_residues MGDTAPYPGLAPDLWDLAREMAADPDPVPEHLRPISQLRAAVARMEAALPPVPDDIQTRDWTMDVAGRAVPLRSYQTADA RAAAMLYIHGGGWSLGSIRGHDLICADIARDTGLRVVSIDYALAPEHPYPAALTECVAVFQHLRTGASPLETVPGLWLGG DSAGGNLALGAALKTKGAAGLFLIYPATDPTCGADSYTTHANAPYLSRDMMHRCWRDYLGGQSPDIYTSPNTADLRSLPQ AVILTATLDPLLGDGEELAATFLAAGTPVWYETASGLIHGFLRFRAISPASDAAFRRATAALAVRL >Mature_305_residues GDTAPYPGLAPDLWDLAREMAADPDPVPEHLRPISQLRAAVARMEAALPPVPDDIQTRDWTMDVAGRAVPLRSYQTADAR AAAMLYIHGGGWSLGSIRGHDLICADIARDTGLRVVSIDYALAPEHPYPAALTECVAVFQHLRTGASPLETVPGLWLGGD SAGGNLALGAALKTKGAAGLFLIYPATDPTCGADSYTTHANAPYLSRDMMHRCWRDYLGGQSPDIYTSPNTADLRSLPQA VILTATLDPLLGDGEELAATFLAAGTPVWYETASGLIHGFLRFRAISPASDAAFRRATAALAVRL
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Secreted (Potential). Note=External to the cytoplasmic membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI68051721, Length=153, Percent_Identity=35.2941176470588, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI21328446, Length=169, Percent_Identity=30.7692307692308, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI68299767, Length=194, Percent_Identity=28.8659793814433, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1786682, Length=328, Percent_Identity=27.1341463414634, Blast_Score=82, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17567059, Length=263, Percent_Identity=28.8973384030418, Blast_Score=78, Evalue=7e-15, Organism=Caenorhabditis elegans, GI71996133, Length=143, Percent_Identity=31.4685314685315, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI72001146, Length=134, Percent_Identity=34.3283582089552, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24656084, Length=170, Percent_Identity=30, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI24656076, Length=170, Percent_Identity=30, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI20130169, Length=170, Percent_Identity=30, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: 3.1.1.- [C]
Molecular weight: Translated: 32499; Mature: 32368
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDTAPYPGLAPDLWDLAREMAADPDPVPEHLRPISQLRAAVARMEAALPPVPDDIQTRD CCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC WTMDVAGRAVPLRSYQTADARAAAMLYIHGGGWSLGSIRGHDLICADIARDTGLRVVSID EEEECCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEHHCCCCCEEEEEE YALAPEHPYPAALTECVAVFQHLRTGASPLETVPGLWLGGDSAGGNLALGAALKTKGAAG EEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCEEECCCCCCCCEEEEHHHHCCCCCC LFLIYPATDPTCGADSYTTHANAPYLSRDMMHRCWRDYLGGQSPDIYTSPNTADLRSLPQ EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHCCH AVILTATLDPLLGDGEELAATFLAAGTPVWYETASGLIHGFLRFRAISPASDAAFRRATA HEEEEEHHCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ALAVRL HHEECC >Mature Secondary Structure GDTAPYPGLAPDLWDLAREMAADPDPVPEHLRPISQLRAAVARMEAALPPVPDDIQTRD CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC WTMDVAGRAVPLRSYQTADARAAAMLYIHGGGWSLGSIRGHDLICADIARDTGLRVVSID EEEECCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEHHCCCCCEEEEEE YALAPEHPYPAALTECVAVFQHLRTGASPLETVPGLWLGGDSAGGNLALGAALKTKGAAG EEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCEEECCCCCCCCEEEEHHHHCCCCCC LFLIYPATDPTCGADSYTTHANAPYLSRDMMHRCWRDYLGGQSPDIYTSPNTADLRSLPQ EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHCCH AVILTATLDPLLGDGEELAATFLAAGTPVWYETASGLIHGFLRFRAISPASDAAFRRATA HEEEEEHHCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ALAVRL HHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Carboxylic ester; H2O [C]
Specific reaction: Carboxylic ester + H2O = an alcohol + carboxylate [C]
General reaction: Hydrolase; Acting on ester bonds; Carboxylic ester hydrolases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2545531 [H]