| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052879
Identifier: 89052879
GI number: 89052879
Start: 392285
End: 392986
Strand: Reverse
Name: 89052879
Synonym: Jann_0388
Alternate gene names: NA
Gene position: 392986-392285 (Counterclockwise)
Preceding gene: 89052880
Following gene: 89052878
Centisome position: 9.1
GC content: 58.55
Gene sequence:
>702_bases ATGCCGGACAATACTTCCTCCGTTTCTGACACACGGATCGCGTCAACACGCGTCGTACAACTTGGCATTCTGGCGGTCGT CGTGGTTCTCGTGACGTCCGCCGTTTTGCTGTTCGTGAACCTGCCCGATGCGGACGCCTTTAACGAGGCGGTCGTTCAGG TGTTCGAGGCCAATGAGGTCCGTGATCCGGATGCGATCCGGATGTTGGAGGTGCTGGCGCAATCCGGCACGACGTTCTCC AAGGTGTTGGCCAGTTATCGCGCCGTCATCTTTGTCCTGATGATCTTCGCCACCGCGCTTCTGGTGGCTTGCCTCGTGTT TCTGGTCACGATTATCACCCTGAACCGCCGCATGCGCGAGATTGAGCGTCAGGGAATTCAGGTTTCGTCCCTGATCCTGT CGCGCGAAGAGCGTGTGGTGCTGATCAACAACCTCGAATTCAAGCTGACCGACGCGGCGATGGAAACGCTGTCCGTTTTG GCCGAAGCGCGTCTGGACGATGACGTGCTGACCGGCGCGCAGATTGAATCGATGGTTTCCGGCAAGCACGAAACGGATGT CGACGAGGCGGCGGGGGCGACCCGCATCAAGCGTCTGCGCGACACGCTTGGCAACCAGATGGTGTCCGAGCTGCTGATCA AGAACATCGCGCGGCGCGGGTATATTCTGGCGATCGACAAAGACGTCATCAAGATGATGTAG
Upstream 100 bases:
>100_bases GCATCCGGTGTGGTGGCTGGCCGTCTTTCCGCCCAAGGCTGGACGTTGGTGAATGTGAGTTCGGTGTTTGACGACAGCGG CCTCGCCTCAAGGAGAGCGG
Downstream 100 bases:
>100_bases ATGGGCGATACGGCCCCCTATCCCGGCCTCGCCCCGGACCTTTGGGATCTGGCGCGCGAGATGGCCGCCGACCCCGACCC GGTGCCCGAGCATCTGCGCC
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Transcriptional Regulator
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MPDNTSSVSDTRIASTRVVQLGILAVVVVLVTSAVLLFVNLPDADAFNEAVVQVFEANEVRDPDAIRMLEVLAQSGTTFS KVLASYRAVIFVLMIFATALLVACLVFLVTIITLNRRMREIERQGIQVSSLILSREERVVLINNLEFKLTDAAMETLSVL AEARLDDDVLTGAQIESMVSGKHETDVDEAAGATRIKRLRDTLGNQMVSELLIKNIARRGYILAIDKDVIKMM
Sequences:
>Translated_233_residues MPDNTSSVSDTRIASTRVVQLGILAVVVVLVTSAVLLFVNLPDADAFNEAVVQVFEANEVRDPDAIRMLEVLAQSGTTFS KVLASYRAVIFVLMIFATALLVACLVFLVTIITLNRRMREIERQGIQVSSLILSREERVVLINNLEFKLTDAAMETLSVL AEARLDDDVLTGAQIESMVSGKHETDVDEAAGATRIKRLRDTLGNQMVSELLIKNIARRGYILAIDKDVIKMM >Mature_232_residues PDNTSSVSDTRIASTRVVQLGILAVVVVLVTSAVLLFVNLPDADAFNEAVVQVFEANEVRDPDAIRMLEVLAQSGTTFSK VLASYRAVIFVLMIFATALLVACLVFLVTIITLNRRMREIERQGIQVSSLILSREERVVLINNLEFKLTDAAMETLSVLA EARLDDDVLTGAQIESMVSGKHETDVDEAAGATRIKRLRDTLGNQMVSELLIKNIARRGYILAIDKDVIKMM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25651; Mature: 25520
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDNTSSVSDTRIASTRVVQLGILAVVVVLVTSAVLLFVNLPDADAFNEAVVQVFEANEV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCC RDPDAIRMLEVLAQSGTTFSKVLASYRAVIFVLMIFATALLVACLVFLVTIITLNRRMRE CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IERQGIQVSSLILSREERVVLINNLEFKLTDAAMETLSVLAEARLDDDVLTGAQIESMVS HHHCCCHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC GKHETDVDEAAGATRIKRLRDTLGNQMVSELLIKNIARRGYILAIDKDVIKMM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHCC >Mature Secondary Structure PDNTSSVSDTRIASTRVVQLGILAVVVVLVTSAVLLFVNLPDADAFNEAVVQVFEANEV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCC RDPDAIRMLEVLAQSGTTFSKVLASYRAVIFVLMIFATALLVACLVFLVTIITLNRRMRE CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IERQGIQVSSLILSREERVVLINNLEFKLTDAAMETLSVLAEARLDDDVLTGAQIESMVS HHHCCCHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC GKHETDVDEAAGATRIKRLRDTLGNQMVSELLIKNIARRGYILAIDKDVIKMM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA