Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052879

Identifier: 89052879

GI number: 89052879

Start: 392285

End: 392986

Strand: Reverse

Name: 89052879

Synonym: Jann_0388

Alternate gene names: NA

Gene position: 392986-392285 (Counterclockwise)

Preceding gene: 89052880

Following gene: 89052878

Centisome position: 9.1

GC content: 58.55

Gene sequence:

>702_bases
ATGCCGGACAATACTTCCTCCGTTTCTGACACACGGATCGCGTCAACACGCGTCGTACAACTTGGCATTCTGGCGGTCGT
CGTGGTTCTCGTGACGTCCGCCGTTTTGCTGTTCGTGAACCTGCCCGATGCGGACGCCTTTAACGAGGCGGTCGTTCAGG
TGTTCGAGGCCAATGAGGTCCGTGATCCGGATGCGATCCGGATGTTGGAGGTGCTGGCGCAATCCGGCACGACGTTCTCC
AAGGTGTTGGCCAGTTATCGCGCCGTCATCTTTGTCCTGATGATCTTCGCCACCGCGCTTCTGGTGGCTTGCCTCGTGTT
TCTGGTCACGATTATCACCCTGAACCGCCGCATGCGCGAGATTGAGCGTCAGGGAATTCAGGTTTCGTCCCTGATCCTGT
CGCGCGAAGAGCGTGTGGTGCTGATCAACAACCTCGAATTCAAGCTGACCGACGCGGCGATGGAAACGCTGTCCGTTTTG
GCCGAAGCGCGTCTGGACGATGACGTGCTGACCGGCGCGCAGATTGAATCGATGGTTTCCGGCAAGCACGAAACGGATGT
CGACGAGGCGGCGGGGGCGACCCGCATCAAGCGTCTGCGCGACACGCTTGGCAACCAGATGGTGTCCGAGCTGCTGATCA
AGAACATCGCGCGGCGCGGGTATATTCTGGCGATCGACAAAGACGTCATCAAGATGATGTAG

Upstream 100 bases:

>100_bases
GCATCCGGTGTGGTGGCTGGCCGTCTTTCCGCCCAAGGCTGGACGTTGGTGAATGTGAGTTCGGTGTTTGACGACAGCGG
CCTCGCCTCAAGGAGAGCGG

Downstream 100 bases:

>100_bases
ATGGGCGATACGGCCCCCTATCCCGGCCTCGCCCCGGACCTTTGGGATCTGGCGCGCGAGATGGCCGCCGACCCCGACCC
GGTGCCCGAGCATCTGCGCC

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Transcriptional Regulator

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MPDNTSSVSDTRIASTRVVQLGILAVVVVLVTSAVLLFVNLPDADAFNEAVVQVFEANEVRDPDAIRMLEVLAQSGTTFS
KVLASYRAVIFVLMIFATALLVACLVFLVTIITLNRRMREIERQGIQVSSLILSREERVVLINNLEFKLTDAAMETLSVL
AEARLDDDVLTGAQIESMVSGKHETDVDEAAGATRIKRLRDTLGNQMVSELLIKNIARRGYILAIDKDVIKMM

Sequences:

>Translated_233_residues
MPDNTSSVSDTRIASTRVVQLGILAVVVVLVTSAVLLFVNLPDADAFNEAVVQVFEANEVRDPDAIRMLEVLAQSGTTFS
KVLASYRAVIFVLMIFATALLVACLVFLVTIITLNRRMREIERQGIQVSSLILSREERVVLINNLEFKLTDAAMETLSVL
AEARLDDDVLTGAQIESMVSGKHETDVDEAAGATRIKRLRDTLGNQMVSELLIKNIARRGYILAIDKDVIKMM
>Mature_232_residues
PDNTSSVSDTRIASTRVVQLGILAVVVVLVTSAVLLFVNLPDADAFNEAVVQVFEANEVRDPDAIRMLEVLAQSGTTFSK
VLASYRAVIFVLMIFATALLVACLVFLVTIITLNRRMREIERQGIQVSSLILSREERVVLINNLEFKLTDAAMETLSVLA
EARLDDDVLTGAQIESMVSGKHETDVDEAAGATRIKRLRDTLGNQMVSELLIKNIARRGYILAIDKDVIKMM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25651; Mature: 25520

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDNTSSVSDTRIASTRVVQLGILAVVVVLVTSAVLLFVNLPDADAFNEAVVQVFEANEV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCC
RDPDAIRMLEVLAQSGTTFSKVLASYRAVIFVLMIFATALLVACLVFLVTIITLNRRMRE
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IERQGIQVSSLILSREERVVLINNLEFKLTDAAMETLSVLAEARLDDDVLTGAQIESMVS
HHHCCCHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
GKHETDVDEAAGATRIKRLRDTLGNQMVSELLIKNIARRGYILAIDKDVIKMM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHCC
>Mature Secondary Structure 
PDNTSSVSDTRIASTRVVQLGILAVVVVLVTSAVLLFVNLPDADAFNEAVVQVFEANEV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCC
RDPDAIRMLEVLAQSGTTFSKVLASYRAVIFVLMIFATALLVACLVFLVTIITLNRRMRE
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IERQGIQVSSLILSREERVVLINNLEFKLTDAAMETLSVLAEARLDDDVLTGAQIESMVS
HHHCCCHHHHHHHCCCCCEEEEECCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
GKHETDVDEAAGATRIKRLRDTLGNQMVSELLIKNIARRGYILAIDKDVIKMM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA