Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052823

Identifier: 89052823

GI number: 89052823

Start: 338166

End: 338885

Strand: Direct

Name: 89052823

Synonym: Jann_0332

Alternate gene names: NA

Gene position: 338166-338885 (Clockwise)

Preceding gene: 89052822

Following gene: 89052831

Centisome position: 7.83

GC content: 60.14

Gene sequence:

>720_bases
ATGAGTAGAATTGGATATCTGATGGGGCAGAATGCTCAAACAGATCGGTCGCGGCGCGGCTATATCACGATTGACTGGCT
GGTCCTGGCCGTGGCTGGAATTGCGCTTCTGTTTCTTATGGGAACCCTCGTGCGCACAGCTGCGGATGCCGAGATTCTGG
CCTCCGATGGCTTTCATCAGCTCAATGGTGATGACACGTTGCTGGCCTTCCAGGACTTCAGTTTTGATGCGGCGGGATGG
GCCCCATCCGAGACGAGCGACCGTGTGCCCGGGATCGGACCTGTCCTCGGGCCGTTCGGGACAGAGCCGGTTCAACGCTC
ATTCTCGATGCCCTCAGATGCCACAGTGGCACGGATTTCCTTTGACCTGCATCTGGTCGGGGACTGGACCGGCCAGGGCG
CGTTCCATGTGTCCCTTGCCGAGACGGAGGTGGTGGCGATCGAGCTGCCTGACGCGGCGGATCCGGGCGTGGTCGACACG
CAGGCCATCCAGAATGACGGCATCATTGTCGGCGTGCAAAGCCATGCCGTCACACCACGTCCGGGAGAGGCGACGCTTCC
CGGTGTGGTCGACGATTTTGTGACCGTGAGCCTTGAGATCATCGTGTCTCATCCGGCTGAGACTCTGGCTCTTCGCCTTT
TTTCCGAAGTTGGCGGTGGCGCGGAATGGACGCTCGACAACTTTACAGTCGTGGCTACCAGCGGTGATACGCCGTCCTAG

Upstream 100 bases:

>100_bases
GGTTCTCGGTACTTTGATGACATGGATTGAACAATGGGGCAAAACTGTCCAATCTTTGCCTTCATTCCGCCACATTTCGA
CATTTGGTAAGTGGTGTGTA

Downstream 100 bases:

>100_bases
GGGCGGCGCCTACAATCCGGCGTCAAGCAAAGCGCGAATGTCAGCCTCCCGCGTGCCTGCAACGATCCGACCGACCTCTG
CCCCATCGCGGAACAACACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MSRIGYLMGQNAQTDRSRRGYITIDWLVLAVAGIALLFLMGTLVRTAADAEILASDGFHQLNGDDTLLAFQDFSFDAAGW
APSETSDRVPGIGPVLGPFGTEPVQRSFSMPSDATVARISFDLHLVGDWTGQGAFHVSLAETEVVAIELPDAADPGVVDT
QAIQNDGIIVGVQSHAVTPRPGEATLPGVVDDFVTVSLEIIVSHPAETLALRLFSEVGGGAEWTLDNFTVVATSGDTPS

Sequences:

>Translated_239_residues
MSRIGYLMGQNAQTDRSRRGYITIDWLVLAVAGIALLFLMGTLVRTAADAEILASDGFHQLNGDDTLLAFQDFSFDAAGW
APSETSDRVPGIGPVLGPFGTEPVQRSFSMPSDATVARISFDLHLVGDWTGQGAFHVSLAETEVVAIELPDAADPGVVDT
QAIQNDGIIVGVQSHAVTPRPGEATLPGVVDDFVTVSLEIIVSHPAETLALRLFSEVGGGAEWTLDNFTVVATSGDTPS
>Mature_238_residues
SRIGYLMGQNAQTDRSRRGYITIDWLVLAVAGIALLFLMGTLVRTAADAEILASDGFHQLNGDDTLLAFQDFSFDAAGWA
PSETSDRVPGIGPVLGPFGTEPVQRSFSMPSDATVARISFDLHLVGDWTGQGAFHVSLAETEVVAIELPDAADPGVVDTQ
AIQNDGIIVGVQSHAVTPRPGEATLPGVVDDFVTVSLEIIVSHPAETLALRLFSEVGGGAEWTLDNFTVVATSGDTPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25180; Mature: 25049

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIGYLMGQNAQTDRSRRGYITIDWLVLAVAGIALLFLMGTLVRTAADAEILASDGFHQ
CCCCCCEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEE
LNGDDTLLAFQDFSFDAAGWAPSETSDRVPGIGPVLGPFGTEPVQRSFSMPSDATVARIS
ECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEE
FDLHLVGDWTGQGAFHVSLAETEVVAIELPDAADPGVVDTQAIQNDGIIVGVQSHAVTPR
EEEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCCEEHHEECCCCEEEEEECCCCCCC
PGEATLPGVVDDFVTVSLEIIVSHPAETLALRLFSEVGGGAEWTLDNFTVVATSGDTPS
CCCCCCCCHHHHHHEEEEEEEEECCHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCC
>Mature Secondary Structure 
SRIGYLMGQNAQTDRSRRGYITIDWLVLAVAGIALLFLMGTLVRTAADAEILASDGFHQ
CCCCCEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEE
LNGDDTLLAFQDFSFDAAGWAPSETSDRVPGIGPVLGPFGTEPVQRSFSMPSDATVARIS
ECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEE
FDLHLVGDWTGQGAFHVSLAETEVVAIELPDAADPGVVDTQAIQNDGIIVGVQSHAVTPR
EEEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCCEEHHEECCCCEEEEEECCCCCCC
PGEATLPGVVDDFVTVSLEIIVSHPAETLALRLFSEVGGGAEWTLDNFTVVATSGDTPS
CCCCCCCCHHHHHHEEEEEEEEECCHHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA