| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is msrA2 [H]
Identifier: 89052831
GI number: 89052831
Start: 345842
End: 346522
Strand: Direct
Name: msrA2 [H]
Synonym: Jann_0340
Alternate gene names: 89052831
Gene position: 345842-346522 (Clockwise)
Preceding gene: 89052823
Following gene: 89052833
Centisome position: 8.01
GC content: 63.73
Gene sequence:
>681_bases ATGCCCAGAAACCCGATCCATGAGACCGTCAAGGTCTTCACCCTGTCCATGGCGATCCTTGCGGGCATCGCGCTGCAAGG TGGCCGCGCCCATGCCGAAGACATCCGCACGACCGTTGTTGCAGGCGGTTGCTTCTGGTGCGTCGAAAGCGATTTTGAGC GGGTGGACGGCGTGATCGAGGTCGTGTCGGGTTTCGCCGGCGGCTCCGTACCCTACCCGGAATATCGCGACGTGGTGCGC GGCGGGACCGGGCATCTGGAGGTCGTGCAGATCACCTATGATGCCGATGTGCTGCCTTATGCCGGGCTGTTGCGGCTGTT CCTGCGGTCCATTGATCCGCTGGACGCGGGCGGTCAGTTCTGTGACCGCGGCGAAAGCTACACGACGGCAATTTTCGTGG CTGACGAGCGCGAGCGGGACATCGCGCGCGGGGCCATTCTGGAAGCCGAGGGGAGCCTTGGGCAGAGCATCGTGACGCCA GTCCGGGATGCCGCGCCGTTCTATGCGGCGGATGAGTATCACCAGGATTACTACCGCTCCAACGATCTGGTGATCACGCG GTTTGGTCCCCGCCGGAAATCTGTGGCGTATGAGCTGTATCGCACGGCCTGCGGGCGGGACGCGCGCGTGCTGGAGGTCT GGGGATCAGAAGCGCCGTTCGTCGCCGATCACCTGAATTGA
Upstream 100 bases:
>100_bases CCCCGATGCTTTGGCGTTCATATATGCGTGAGATCACACCTCCGTGGCTTGCAATGCAAGCGCCCTTTGGGTGAGCGTCT TGGCAACGCAGGAGGCCTCT
Downstream 100 bases:
>100_bases TCTACCATTGATATACCTGCGGGGCGGACGATCTGGCGCTTACAGGAAGAGCGCCACATTGTTGCGCAAGATGATCTCGA TCGCATAGACGCCAAGGATG
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase 2; Peptide-methionine (S)-S-oxide reductase 2; Peptide Met(O) reductase 2 [H]
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MPRNPIHETVKVFTLSMAILAGIALQGGRAHAEDIRTTVVAGGCFWCVESDFERVDGVIEVVSGFAGGSVPYPEYRDVVR GGTGHLEVVQITYDADVLPYAGLLRLFLRSIDPLDAGGQFCDRGESYTTAIFVADERERDIARGAILEAEGSLGQSIVTP VRDAAPFYAADEYHQDYYRSNDLVITRFGPRRKSVAYELYRTACGRDARVLEVWGSEAPFVADHLN
Sequences:
>Translated_226_residues MPRNPIHETVKVFTLSMAILAGIALQGGRAHAEDIRTTVVAGGCFWCVESDFERVDGVIEVVSGFAGGSVPYPEYRDVVR GGTGHLEVVQITYDADVLPYAGLLRLFLRSIDPLDAGGQFCDRGESYTTAIFVADERERDIARGAILEAEGSLGQSIVTP VRDAAPFYAADEYHQDYYRSNDLVITRFGPRRKSVAYELYRTACGRDARVLEVWGSEAPFVADHLN >Mature_225_residues PRNPIHETVKVFTLSMAILAGIALQGGRAHAEDIRTTVVAGGCFWCVESDFERVDGVIEVVSGFAGGSVPYPEYRDVVRG GTGHLEVVQITYDADVLPYAGLLRLFLRSIDPLDAGGQFCDRGESYTTAIFVADERERDIARGAILEAEGSLGQSIVTPV RDAAPFYAADEYHQDYYRSNDLVITRFGPRRKSVAYELYRTACGRDARVLEVWGSEAPFVADHLN
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=153, Percent_Identity=32.0261437908497, Blast_Score=92, Evalue=3e-19, Organism=Homo sapiens, GI208609995, Length=153, Percent_Identity=32.0261437908497, Blast_Score=92, Evalue=4e-19, Organism=Escherichia coli, GI1790665, Length=152, Percent_Identity=34.8684210526316, Blast_Score=102, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17533973, Length=135, Percent_Identity=29.6296296296296, Blast_Score=73, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6320881, Length=155, Percent_Identity=29.0322580645161, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI24664627, Length=142, Percent_Identity=31.6901408450704, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI45553131, Length=136, Percent_Identity=32.3529411764706, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24664631, Length=143, Percent_Identity=31.4685314685315, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 24854; Mature: 24723
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRNPIHETVKVFTLSMAILAGIALQGGRAHAEDIRTTVVAGGCFWCVESDFERVDGVIE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEECCEEEEECCHHHHHHHHHH VVSGFAGGSVPYPEYRDVVRGGTGHLEVVQITYDADVLPYAGLLRLFLRSIDPLDAGGQF HHHHCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHH CDRGESYTTAIFVADERERDIARGAILEAEGSLGQSIVTPVRDAAPFYAADEYHQDYYRS HHCCCCEEEEEEEECCCHHHHHHCEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCC NDLVITRFGPRRKSVAYELYRTACGRDARVLEVWGSEAPFVADHLN CCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCC >Mature Secondary Structure PRNPIHETVKVFTLSMAILAGIALQGGRAHAEDIRTTVVAGGCFWCVESDFERVDGVIE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEECCEEEEECCHHHHHHHHHH VVSGFAGGSVPYPEYRDVVRGGTGHLEVVQITYDADVLPYAGLLRLFLRSIDPLDAGGQF HHHHCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHH CDRGESYTTAIFVADERERDIARGAILEAEGSLGQSIVTPVRDAAPFYAADEYHQDYYRS HHCCCCEEEEEEEECCCHHHHHHCEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCC NDLVITRFGPRRKSVAYELYRTACGRDARVLEVWGSEAPFVADHLN CCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]