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The map label for this gene is paiB [H]

Identifier: 89052811

GI number: 89052811

Start: 327770

End: 328423

Strand: Direct

Name: paiB [H]

Synonym: Jann_0320

Alternate gene names: 89052811

Gene position: 327770-328423 (Clockwise)

Preceding gene: 89052810

Following gene: 89052812

Centisome position: 7.59

GC content: 61.31

Gene sequence:

>654_bases
ATGCACCCGAACCCGGCGTTCCGCCAAGAGCCCGTCTTTACCAACGTTGCCATGTGCCAGAAGCGTGGCTTCGGGATGTT
GTCCGTGAACGGCGACCCGGCGCCAATGATCTCCCACGTGCCCTTCTTTCTGAACGAGACGGGTGCTATGGCGGAATTGC
ATCTGATGCGATCCAACCCCATTGCCCGGCACGTCACGACAGCCACCCCTGCGGTGATCGCGGTCAATGGCCCGGACGGG
TATGTGTCGCCCGATTGGTACGGCACGCCTGATCAGGTGCCGACGTGGAATTACGTGGCCATTCACCTGCGGGGTGTTCT
GCATCCGATGGATGAAGGGCTGATGCGGGAGCATCTGGACCGTCTGTCCGGGCACTTTGAAGGGCGTCTTGCGCCCAAGC
CCGTCTGGACGACCAAAAAGATGTCCGAAGACGCGCTGGAGCGGATGATGCGCCAGATCCTGCCCTTCCGTTTTGAGGTT
CAGGATGTGGACGGCACCTGGAAGCTGAACCAGAACAAGCCCGACGCGGCCCGGGAAGGCGCGGCGGATGCGATCAAGCA
ATCGCCCATCGGCCACGAGGTTGAAACGCTTGGCGCATTGATGACCGGCGGCGTGCCGTCGATTGATAAGGACGCGCCTC
TCACCTACATCTAA

Upstream 100 bases:

>100_bases
GGATCAACCCGAAGGAGAGATTGTAAGCGCATACATAACTGGGCAGACGGATCGACAGCTACTGGTCGCGTCCTGAACCC
CTCTGTCTTGAGGTCGTCCC

Downstream 100 bases:

>100_bases
GGGACCGCTCTTCACGGAAGGACGACCCAGATGGCTTTGAACATTCCTCCGATGGCCTTTATCGTGCTGCGCTATGGCGC
CGTGGCAGTGGCCGGATTTG

Product: negative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MHPNPAFRQEPVFTNVAMCQKRGFGMLSVNGDPAPMISHVPFFLNETGAMAELHLMRSNPIARHVTTATPAVIAVNGPDG
YVSPDWYGTPDQVPTWNYVAIHLRGVLHPMDEGLMREHLDRLSGHFEGRLAPKPVWTTKKMSEDALERMMRQILPFRFEV
QDVDGTWKLNQNKPDAAREGAADAIKQSPIGHEVETLGALMTGGVPSIDKDAPLTYI

Sequences:

>Translated_217_residues
MHPNPAFRQEPVFTNVAMCQKRGFGMLSVNGDPAPMISHVPFFLNETGAMAELHLMRSNPIARHVTTATPAVIAVNGPDG
YVSPDWYGTPDQVPTWNYVAIHLRGVLHPMDEGLMREHLDRLSGHFEGRLAPKPVWTTKKMSEDALERMMRQILPFRFEV
QDVDGTWKLNQNKPDAAREGAADAIKQSPIGHEVETLGALMTGGVPSIDKDAPLTYI
>Mature_217_residues
MHPNPAFRQEPVFTNVAMCQKRGFGMLSVNGDPAPMISHVPFFLNETGAMAELHLMRSNPIARHVTTATPAVIAVNGPDG
YVSPDWYGTPDQVPTWNYVAIHLRGVLHPMDEGLMREHLDRLSGHFEGRLAPKPVWTTKKMSEDALERMMRQILPFRFEV
QDVDGTWKLNQNKPDAAREGAADAIKQSPIGHEVETLGALMTGGVPSIDKDAPLTYI

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 24063; Mature: 24063

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPNPAFRQEPVFTNVAMCQKRGFGMLSVNGDPAPMISHVPFFLNETGAMAELHLMRSNP
CCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHCCHHHCCCCCEEEEEEHHCCC
IARHVTTATPAVIAVNGPDGYVSPDWYGTPDQVPTWNYVAIHLRGVLHPMDEGLMREHLD
HHHHEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHCHHHHHHHHHHHH
RLSGHFEGRLAPKPVWTTKKMSEDALERMMRQILPFRFEVQDVDGTWKLNQNKPDAAREG
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCEEEECCCCCCHHHHH
AADAIKQSPIGHEVETLGALMTGGVPSIDKDAPLTYI
HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHPNPAFRQEPVFTNVAMCQKRGFGMLSVNGDPAPMISHVPFFLNETGAMAELHLMRSNP
CCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHCCHHHCCCCCEEEEEEHHCCC
IARHVTTATPAVIAVNGPDGYVSPDWYGTPDQVPTWNYVAIHLRGVLHPMDEGLMREHLD
HHHHEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHCHHHHHHHHHHHH
RLSGHFEGRLAPKPVWTTKKMSEDALERMMRQILPFRFEVQDVDGTWKLNQNKPDAAREG
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCEEEECCCCCCHHHHH
AADAIKQSPIGHEVETLGALMTGGVPSIDKDAPLTYI
HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]