| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052812
Identifier: 89052812
GI number: 89052812
Start: 328454
End: 328735
Strand: Direct
Name: 89052812
Synonym: Jann_0321
Alternate gene names: NA
Gene position: 328454-328735 (Clockwise)
Preceding gene: 89052811
Following gene: 89052813
Centisome position: 7.61
GC content: 64.54
Gene sequence:
>282_bases ATGGCTTTGAACATTCCTCCGATGGCCTTTATCGTGCTGCGCTATGGCGCCGTGGCAGTGGCCGGATTTGCGGCGGCGCG GTTTGCGCCCCGCGGGACACTGTCACCCGCGGTGGAGGCTGAAATGGACGCGACCCCCGATGGCATGCAGATGTGCAAAG CACCCGGTCAGCTGGCGGCGGCGGGCAAGATCACGAAAACGTTGCGGGTGGGACGGCTCGGCCCGATGTTCCGCGTAGAT GGCACGGCGCTGGCGCGTCTGAAGATAAGGCGACTGACGTAA
Upstream 100 bases:
>100_bases AACGCTTGGCGCATTGATGACCGGCGGCGTGCCGTCGATTGATAAGGACGCGCCTCTCACCTACATCTAAGGGACCGCTC TTCACGGAAGGACGACCCAG
Downstream 100 bases:
>100_bases TGGACACTGGCACGATTGAACTTCTGGGCTCTGACGCCTCCCCCTTCGTGCGCAAGGCGCGTGTTCTGGTGGCGGAGGCG GGTATCACAGATGTCCCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MALNIPPMAFIVLRYGAVAVAGFAAARFAPRGTLSPAVEAEMDATPDGMQMCKAPGQLAAAGKITKTLRVGRLGPMFRVD GTALARLKIRRLT
Sequences:
>Translated_93_residues MALNIPPMAFIVLRYGAVAVAGFAAARFAPRGTLSPAVEAEMDATPDGMQMCKAPGQLAAAGKITKTLRVGRLGPMFRVD GTALARLKIRRLT >Mature_92_residues ALNIPPMAFIVLRYGAVAVAGFAAARFAPRGTLSPAVEAEMDATPDGMQMCKAPGQLAAAGKITKTLRVGRLGPMFRVDG TALARLKIRRLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9785; Mature: 9654
Theoretical pI: Translated: 11.77; Mature: 11.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALNIPPMAFIVLRYGAVAVAGFAAARFAPRGTLSPAVEAEMDATPDGMQMCKAPGQLAA CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC AGKITKTLRVGRLGPMFRVDGTALARLKIRRLT CCHHHHHHHCCCCCCEEEECCCEEEEEEEEECC >Mature Secondary Structure ALNIPPMAFIVLRYGAVAVAGFAAARFAPRGTLSPAVEAEMDATPDGMQMCKAPGQLAA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC AGKITKTLRVGRLGPMFRVDGTALARLKIRRLT CCHHHHHHHCCCCCCEEEECCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA