Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052785

Identifier: 89052785

GI number: 89052785

Start: 302000

End: 302881

Strand: Reverse

Name: 89052785

Synonym: Jann_0294

Alternate gene names: NA

Gene position: 302881-302000 (Counterclockwise)

Preceding gene: 89052789

Following gene: 89052784

Centisome position: 7.01

GC content: 61.45

Gene sequence:

>882_bases
TTGCAACAGTCTCAGCCCCGTCTGACCGATGCCAGAGCGCTTGCCGCTCATCGTGCCCGTGTCAAAGGGGGGACGCACAT
TGCAGATGCGCGGTTTCTTCACGATGAGGCCATTGCCGAGCTTCAGGAAAGACTGAAGGACGTTAACAGATCGTTTACAG
CACCGGCAATTGTGACTGATTTCCCGACAATTTGGTACGATTTGATTCCAAGTGCGCAATTTTTCCCCGTTCGGGAGGTT
CTGGACCTCAAACCCGGTGCCCATGATCTGGTCGTGCACGCGATGGGATTGCATTGGGCCGATGATCCCGTGGGTCAGGT
CGTACAATGCGCGCGGGCGCTGGCACCCGACGGTCTGTTCCTGTCCGCAGCCTTTGGCGGCAGCACCCTGACGGAATTGC
GCCAGGCGCTCGCGCAGGCGGAAGCGCAGGTGATGGGAGGGCTGTCACCGCGCGTTGCCCCCATGGCGGAGGTGCGCGAT
ATGGGGGCGCTGTTGCAACGGGCGGGGCTGGCGTTGCCGGTGGCGGATACGCTGCGCAAGACCGTCACGTACCCCGATGC
CATTGCCCTCATGCACGACCTGCGCGCGATGGGGGAAACCAACGCTTTGGCCGAGCGTCACAAGACAATCCCGCCCCGCG
CGCTGTTCCCGACGGCCGCCGCAATCTATGCCGAATCCTTCCCGGCACAAGAAAATCGCATCCAAGCGAGCTTTGAGTTC
GTATTCCTTACAGGATGGGCCCCGCACGAGAGCCAGCAGACACCCCTGCGGCCCGGCGCAGCGACATCTCGTTTAGCGGA
TGCTCTGGGCACCACGGAATTTGACGAGGGGGCCAATCCGGTCCATGACCTCCCCGACGACGAAAGTTTGAAACAGACAT
GA

Upstream 100 bases:

>100_bases
TGAGGCATTCCGGCGGAAACACCGCATGCAACATGGTTTGCAATCTCATACGTGACCCCTAAGTACCGCGCAGGACGACC
ACCCCACCCGGAGCCTTCAT

Downstream 100 bases:

>100_bases
ACATGATGCCAGCCGGAGATGCGCCAGCACTGATGGATACAGATGCGCCAGCTTTGACGACGACGGATGCGCCAGCCCTC
GCCCACGCGCCCTCGGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MQQSQPRLTDARALAAHRARVKGGTHIADARFLHDEAIAELQERLKDVNRSFTAPAIVTDFPTIWYDLIPSAQFFPVREV
LDLKPGAHDLVVHAMGLHWADDPVGQVVQCARALAPDGLFLSAAFGGSTLTELRQALAQAEAQVMGGLSPRVAPMAEVRD
MGALLQRAGLALPVADTLRKTVTYPDAIALMHDLRAMGETNALAERHKTIPPRALFPTAAAIYAESFPAQENRIQASFEF
VFLTGWAPHESQQTPLRPGAATSRLADALGTTEFDEGANPVHDLPDDESLKQT

Sequences:

>Translated_293_residues
MQQSQPRLTDARALAAHRARVKGGTHIADARFLHDEAIAELQERLKDVNRSFTAPAIVTDFPTIWYDLIPSAQFFPVREV
LDLKPGAHDLVVHAMGLHWADDPVGQVVQCARALAPDGLFLSAAFGGSTLTELRQALAQAEAQVMGGLSPRVAPMAEVRD
MGALLQRAGLALPVADTLRKTVTYPDAIALMHDLRAMGETNALAERHKTIPPRALFPTAAAIYAESFPAQENRIQASFEF
VFLTGWAPHESQQTPLRPGAATSRLADALGTTEFDEGANPVHDLPDDESLKQT
>Mature_293_residues
MQQSQPRLTDARALAAHRARVKGGTHIADARFLHDEAIAELQERLKDVNRSFTAPAIVTDFPTIWYDLIPSAQFFPVREV
LDLKPGAHDLVVHAMGLHWADDPVGQVVQCARALAPDGLFLSAAFGGSTLTELRQALAQAEAQVMGGLSPRVAPMAEVRD
MGALLQRAGLALPVADTLRKTVTYPDAIALMHDLRAMGETNALAERHKTIPPRALFPTAAAIYAESFPAQENRIQASFEF
VFLTGWAPHESQQTPLRPGAATSRLADALGTTEFDEGANPVHDLPDDESLKQT

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI40018642, Length=238, Percent_Identity=34.453781512605, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI86792933, Length=237, Percent_Identity=33.3333333333333, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17535003, Length=179, Percent_Identity=32.4022346368715, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI19922210, Length=190, Percent_Identity=38.4210526315789, Blast_Score=144, Evalue=6e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 31764; Mature: 31764

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQSQPRLTDARALAAHRARVKGGTHIADARFLHDEAIAELQERLKDVNRSFTAPAIVTD
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
FPTIWYDLIPSAQFFPVREVLDLKPGAHDLVVHAMGLHWADDPVGQVVQCARALAPDGLF
HHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEE
LSAAFGGSTLTELRQALAQAEAQVMGGLSPRVAPMAEVRDMGALLQRAGLALPVADTLRK
EEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
TVTYPDAIALMHDLRAMGETNALAERHKTIPPRALFPTAAAIYAESFPAQENRIQASFEF
HCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHEEEEEEE
VFLTGWAPHESQQTPLRPGAATSRLADALGTTEFDEGANPVHDLPDDESLKQT
EEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MQQSQPRLTDARALAAHRARVKGGTHIADARFLHDEAIAELQERLKDVNRSFTAPAIVTD
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
FPTIWYDLIPSAQFFPVREVLDLKPGAHDLVVHAMGLHWADDPVGQVVQCARALAPDGLF
HHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEE
LSAAFGGSTLTELRQALAQAEAQVMGGLSPRVAPMAEVRDMGALLQRAGLALPVADTLRK
EEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
TVTYPDAIALMHDLRAMGETNALAERHKTIPPRALFPTAAAIYAESFPAQENRIQASFEF
HCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHEEEEEEE
VFLTGWAPHESQQTPLRPGAATSRLADALGTTEFDEGANPVHDLPDDESLKQT
EEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]