| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is hemH
Identifier: 89052784
GI number: 89052784
Start: 300891
End: 302003
Strand: Reverse
Name: hemH
Synonym: Jann_0293
Alternate gene names: 89052784
Gene position: 302003-300891 (Counterclockwise)
Preceding gene: 89052785
Following gene: 89052780
Centisome position: 6.99
GC content: 58.85
Gene sequence:
>1113_bases ATGAACATGATGCCAGCCGGAGATGCGCCAGCACTGATGGATACAGATGCGCCAGCTTTGACGACGACGGATGCGCCAGC CCTCGCCCACGCGCCCTCGGACCACCCTCGGGTGAAAATGGGGAAGGTGGGTGTGCTTCTGGCCAATCTCGGCACGCCGG ACAATTACGACTATTGGTCCATGCGCCGCTATCTGAACGAGTTTCTCAGTGACAAGCGCGTCATCGACTACAGCCCGTGG ATCTGGCAGCCATTGCTGCAACTGGTGATCCTGAGCAAACGCCCGTTCAGCTCGGGCGCGGCATATAAATCGATCTGGAA TCATGAGGCCGGTGAATCGCCCCTGGCCACGATCACCAAGGACCAGACCGCAAAGATGAAGGCGTTGATGGCCGACCGGT ACGGCGACGATGTCGTGGTCGATTACTGCATGCGCTACGGCAACCCGTCCACCAAGTCGAAGGTGGATGAACTTGTCGCC CAGGGCTGTACCAAGATCCTGTTTTTCCCGCTTTACCCGCAATATGCGGGCGCGACCTCGGCCACCGCGTGTGATCAGTT CTTCCGCTCGCTGGAGAACATCAAATGGCAGCCGCAGGTGCGCACGGTGGAGCCCTATTATGCCAACCCGCTCTATATCG ACGCGCTGGCGCAATCGATTGAGCGGGCCTACGCCGCGATGGACGTGAAGCCCGATCTTCTGGTGACCAGCTACCATGGC GTGCCGAAGCGGTATTTGATGGAGGGCGACCCCTATCATTGCCAATGCCAGAAGACCTCACGCCTGTTGAAAGAGCGTCT GGGGTGGGACGACACGCAGATCGTCACGACCTTTCAATCGAAATTCGGTCCCGAGGAATGGCTTCAGCCCTACACGGTGG AAGAGGTCGCGCGGCTGGCTGAGAAGGGCAAGAAACGCATCGCCGTCTGTGCGCCCGCATTCTCTGCCGATTGCATCGAG ACACTGGAAGAGATCAACGAAGAGATTCGCGAGAGTTTCGAGGAAGCGGGCGGCGAGAGCTTCACGTATATCCCATGCCT CAACGACGATGACGCGCATATGAACGCGTTGGCCACTGTGGTGGACGACAACCTGCGTGGTTGGATCGGCTAA
Upstream 100 bases:
>100_bases CAGCGACATCTCGTTTAGCGGATGCTCTGGGCACCACGGAATTTGACGAGGGGGCCAATCCGGTCCATGACCTCCCCGAC GACGAAAGTTTGAAACAGAC
Downstream 100 bases:
>100_bases GATTTTTTCGCCATCATCACGACAGGAAAAAGCGGGCCGGACGGTCCGCTTTATTTTTGAGATATCAGAAAGTTTATGTG CAGTTAGGCCGCTTGCGCGT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MNMMPAGDAPALMDTDAPALTTTDAPALAHAPSDHPRVKMGKVGVLLANLGTPDNYDYWSMRRYLNEFLSDKRVIDYSPW IWQPLLQLVILSKRPFSSGAAYKSIWNHEAGESPLATITKDQTAKMKALMADRYGDDVVVDYCMRYGNPSTKSKVDELVA QGCTKILFFPLYPQYAGATSATACDQFFRSLENIKWQPQVRTVEPYYANPLYIDALAQSIERAYAAMDVKPDLLVTSYHG VPKRYLMEGDPYHCQCQKTSRLLKERLGWDDTQIVTTFQSKFGPEEWLQPYTVEEVARLAEKGKKRIAVCAPAFSADCIE TLEEINEEIRESFEEAGGESFTYIPCLNDDDAHMNALATVVDDNLRGWIG
Sequences:
>Translated_370_residues MNMMPAGDAPALMDTDAPALTTTDAPALAHAPSDHPRVKMGKVGVLLANLGTPDNYDYWSMRRYLNEFLSDKRVIDYSPW IWQPLLQLVILSKRPFSSGAAYKSIWNHEAGESPLATITKDQTAKMKALMADRYGDDVVVDYCMRYGNPSTKSKVDELVA QGCTKILFFPLYPQYAGATSATACDQFFRSLENIKWQPQVRTVEPYYANPLYIDALAQSIERAYAAMDVKPDLLVTSYHG VPKRYLMEGDPYHCQCQKTSRLLKERLGWDDTQIVTTFQSKFGPEEWLQPYTVEEVARLAEKGKKRIAVCAPAFSADCIE TLEEINEEIRESFEEAGGESFTYIPCLNDDDAHMNALATVVDDNLRGWIG >Mature_370_residues MNMMPAGDAPALMDTDAPALTTTDAPALAHAPSDHPRVKMGKVGVLLANLGTPDNYDYWSMRRYLNEFLSDKRVIDYSPW IWQPLLQLVILSKRPFSSGAAYKSIWNHEAGESPLATITKDQTAKMKALMADRYGDDVVVDYCMRYGNPSTKSKVDELVA QGCTKILFFPLYPQYAGATSATACDQFFRSLENIKWQPQVRTVEPYYANPLYIDALAQSIERAYAAMDVKPDLLVTSYHG VPKRYLMEGDPYHCQCQKTSRLLKERLGWDDTQIVTTFQSKFGPEEWLQPYTVEEVARLAEKGKKRIAVCAPAFSADCIE TLEEINEEIRESFEEAGGESFTYIPCLNDDDAHMNALATVVDDNLRGWIG
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=347, Percent_Identity=25.9365994236311, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI60499025, Length=341, Percent_Identity=25.8064516129032, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1786681, Length=324, Percent_Identity=42.5925925925926, Blast_Score=244, Evalue=5e-66, Organism=Drosophila melanogaster, GI17864156, Length=344, Percent_Identity=26.1627906976744, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI24651774, Length=269, Percent_Identity=25.2788104089219, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 41619; Mature: 41619
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS01164 COPPER_AMINE_OXID_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMMPAGDAPALMDTDAPALTTTDAPALAHAPSDHPRVKMGKVGVLLANLGTPDNYDYWS CCCCCCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCHHH MRRYLNEFLSDKRVIDYSPWIWQPLLQLVILSKRPFSSGAAYKSIWNHEAGESPLATITK HHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCEECCC DQTAKMKALMADRYGDDVVVDYCMRYGNPSTKSKVDELVAQGCTKILFFPLYPQYAGATS CHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCHHHEEEEECCCCCCCCCC ATACDQFFRSLENIKWQPQVRTVEPYYANPLYIDALAQSIERAYAAMDVKPDLLVTSYHG HHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCC VPKRYLMEGDPYHCQCQKTSRLLKERLGWDDTQIVTTFQSKFGPEEWLQPYTVEEVARLA CCHHHHCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHCCCCCHHHHHHHH EKGKKRIAVCAPAFSADCIETLEEINEEIRESFEEAGGESFTYIPCLNDDDAHMNALATV HCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHH VDDNLRGWIG HHCCCCCCCC >Mature Secondary Structure MNMMPAGDAPALMDTDAPALTTTDAPALAHAPSDHPRVKMGKVGVLLANLGTPDNYDYWS CCCCCCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCHHH MRRYLNEFLSDKRVIDYSPWIWQPLLQLVILSKRPFSSGAAYKSIWNHEAGESPLATITK HHHHHHHHHCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCEECCC DQTAKMKALMADRYGDDVVVDYCMRYGNPSTKSKVDELVAQGCTKILFFPLYPQYAGATS CHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCHHHEEEEECCCCCCCCCC ATACDQFFRSLENIKWQPQVRTVEPYYANPLYIDALAQSIERAYAAMDVKPDLLVTSYHG HHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCC VPKRYLMEGDPYHCQCQKTSRLLKERLGWDDTQIVTTFQSKFGPEEWLQPYTVEEVARLA CCHHHHCCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHCCCCCHHHHHHHH EKGKKRIAVCAPAFSADCIETLEEINEEIRESFEEAGGESFTYIPCLNDDDAHMNALATV HCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHH VDDNLRGWIG HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7592455 [H]