Click here to switch to the map view.

The map label for this gene is 89052723

Identifier: 89052723

GI number: 89052723

Start: 226403

End: 227281

Strand: Direct

Name: 89052723

Synonym: Jann_0232

Alternate gene names: NA

Gene position: 226403-227281 (Clockwise)

Preceding gene: 89052722

Following gene: 89052724

Centisome position: 5.24

GC content: 61.43

Gene sequence:

>879_bases
ATGACCAATGTCCCAATCGACCCCCGTCAACTCACTCAGGACCTTGGTGGCAAATGGGCACAAGCCTACGGAACCGCGCC
ATGTCCCATCTGCCAAGACCGCCGCAAGGGTCAAAATGCTCTGACGATCCGTGTGAAAGGCGACCGCCTGTTGATGCACT
GCAAGAAATCCAATTGCAGCTTCATCGACCTTTTGAGGGCGGCAGGCATTGCCCCAGGAACCGTCGAAATTGATCCGACG
GCGCAACGCGAAGCCGACGCGGCGCGGGCTGAATATGAAGCCTACCAGCTTCACCGCGCACGAAAGGCTTGGGACTACGG
CAAGCTGATCACAGGCACCAAAGGCGAGGCATATCTGAGGGGGCGGTGTATCACCTGCCCCCTTCCCGAAACCCTGCGCT
GGATTGCAGACACCTACCACAGCCCGTCTGGGCAATATGGCGCGGCGATTGTTGCGGATGTGCAGCCCACGGGTGGCGTC
CATCGGACTTTCTTTGACAAGCGCGGCAACCGTTTGGCGAAGAATGCCAAGATGATGCTGGGGCCATGCTCGGGCGGCGC
TGTGCGCATGTCTGAGGCGGTAGGGCCGCTCGTGGTGTGTGAAGGTATCGAGACGGGCCTAAGCCTTCTTTCGGGTCTCT
TGGATGGCCCTGCCAACGTCTGGGCGGCGCTGTCCACGTCCGGTCTTCGTGCCTTGGACCTTCCCCCTCGCCCGCCCAGT
GGATCGCTGATTATTGCCACCGATGGCGACGCTCCAGGGCGTGAAGCCGGGGCAGCACTGGCAGACCGCGCTCACACGCT
GGGCTGGCCCGTCTCGATCATGGCTGCGCCGGACGGGCAAGACTTCAACGATGTATTGATGGAAAGGCGTGCGGCATGA

Upstream 100 bases:

>100_bases
GGGACTTTCCGGTCCGTCCGCTGGTGCTTCTCAGCAATGGCGACGTGCGAGACCTCAGCCCCGCAGAAGCAAAATTCTAC
AAGCATGTGGGAGCAGTTTG

Downstream 100 bases:

>100_bases
CGGCTATCAAACCCGAAACCTACACACCGGAAGGCCCCCAGCCGTTGCTTAGGGAGGTGTCGCCGGGGGCTGAGTATCCT
GTTGCATCCCTTGGCCCCCT

Product: virulence-associated protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTNVPIDPRQLTQDLGGKWAQAYGTAPCPICQDRRKGQNALTIRVKGDRLLMHCKKSNCSFIDLLRAAGIAPGTVEIDPT
AQREADAARAEYEAYQLHRARKAWDYGKLITGTKGEAYLRGRCITCPLPETLRWIADTYHSPSGQYGAAIVADVQPTGGV
HRTFFDKRGNRLAKNAKMMLGPCSGGAVRMSEAVGPLVVCEGIETGLSLLSGLLDGPANVWAALSTSGLRALDLPPRPPS
GSLIIATDGDAPGREAGAALADRAHTLGWPVSIMAAPDGQDFNDVLMERRAA

Sequences:

>Translated_292_residues
MTNVPIDPRQLTQDLGGKWAQAYGTAPCPICQDRRKGQNALTIRVKGDRLLMHCKKSNCSFIDLLRAAGIAPGTVEIDPT
AQREADAARAEYEAYQLHRARKAWDYGKLITGTKGEAYLRGRCITCPLPETLRWIADTYHSPSGQYGAAIVADVQPTGGV
HRTFFDKRGNRLAKNAKMMLGPCSGGAVRMSEAVGPLVVCEGIETGLSLLSGLLDGPANVWAALSTSGLRALDLPPRPPS
GSLIIATDGDAPGREAGAALADRAHTLGWPVSIMAAPDGQDFNDVLMERRAA
>Mature_291_residues
TNVPIDPRQLTQDLGGKWAQAYGTAPCPICQDRRKGQNALTIRVKGDRLLMHCKKSNCSFIDLLRAAGIAPGTVEIDPTA
QREADAARAEYEAYQLHRARKAWDYGKLITGTKGEAYLRGRCITCPLPETLRWIADTYHSPSGQYGAAIVADVQPTGGVH
RTFFDKRGNRLAKNAKMMLGPCSGGAVRMSEAVGPLVVCEGIETGLSLLSGLLDGPANVWAALSTSGLRALDLPPRPPSG
SLIIATDGDAPGREAGAALADRAHTLGWPVSIMAAPDGQDFNDVLMERRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31174; Mature: 31043

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNVPIDPRQLTQDLGGKWAQAYGTAPCPICQDRRKGQNALTIRVKGDRLLMHCKKSNCS
CCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCEEEEEECCCCCH
FIDLLRAAGIAPGTVEIDPTAQREADAARAEYEAYQLHRARKAWDYGKLITGTKGEAYLR
HHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEE
GRCITCPLPETLRWIADTYHSPSGQYGAAIVADVQPTGGVHRTFFDKRGNRLAKNAKMML
CEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCHHHCCCEEEE
GPCSGGAVRMSEAVGPLVVCEGIETGLSLLSGLLDGPANVWAALSTSGLRALDLPPRPPS
EECCCCCEEHHHCCCCEEEECCHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCCCC
GSLIIATDGDAPGREAGAALADRAHTLGWPVSIMAAPDGQDFNDVLMERRAA
CCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
TNVPIDPRQLTQDLGGKWAQAYGTAPCPICQDRRKGQNALTIRVKGDRLLMHCKKSNCS
CCCCCCHHHHHHHHCCHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCEEEEEECCCCCH
FIDLLRAAGIAPGTVEIDPTAQREADAARAEYEAYQLHRARKAWDYGKLITGTKGEAYLR
HHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEE
GRCITCPLPETLRWIADTYHSPSGQYGAAIVADVQPTGGVHRTFFDKRGNRLAKNAKMML
CEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCHHHCCCEEEE
GPCSGGAVRMSEAVGPLVVCEGIETGLSLLSGLLDGPANVWAALSTSGLRALDLPPRPPS
EECCCCCEEHHHCCCCEEEECCHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCCCC
GSLIIATDGDAPGREAGAALADRAHTLGWPVSIMAAPDGQDFNDVLMERRAA
CCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA