| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yfjI [H]
Identifier: 89052724
GI number: 89052724
Start: 227278
End: 228801
Strand: Direct
Name: yfjI [H]
Synonym: Jann_0233
Alternate gene names: 89052724
Gene position: 227278-228801 (Clockwise)
Preceding gene: 89052723
Following gene: 89052725
Centisome position: 5.26
GC content: 61.42
Gene sequence:
>1524_bases ATGACGGCTATCAAACCCGAAACCTACACACCGGAAGGCCCCCAGCCGTTGCTTAGGGAGGTGTCGCCGGGGGCTGAGTA TCCTGTTGCATCCCTTGGCCCCCTGAGGGAGGCGGCACAAGCAGCGCAGGCGACGACGCAGGCCCCTATGGCCCTCGCGG CTCAGTCTGCCTTGTCCGTGGCGTCTCTTGCGGTGCAGGCGCATGGTGACGTTGAAACTCTGGGCGGCTTCGCCCCGATC AGCCTCTATTGCCTCACTATTGCCCGATCCGGCGAGCGCAAGAGCGCCACGGATAAGCTGTTGATGGCTGGGCTGCGTGA GTTTGAGCGCGAGGCGGCGGCAGAATATCAGCAAGCGGTTGGCGTTTGGGAAAACACGGCTGAGATACACAAAAACGACC GGGCGCAGATCATGCACGGGTTTAAGAAGGCCACGGGTTCCGAACGGGTGGCATCGAAGGCTGACTTAGAAGCCTTGGGT GCAGAGCCGCCAGCGCCGTTATTGCCAAACCTGACCGCGACCGAGCCAACCCTTGAGGGGCTGCACAAGCTGTTTTTGGC GGGCCAGCCTTCGTTGGGTATGTTCTCAGATGAAGGAGGCGGCTTTCTGGGCGGACACGGCATGTCGCAGGATCACCGCT TGAAGACAGTGGCGGGACTGTCTGCCTTATGGGGTGGTGATCCATTGACACGAGTGCGCGCTGGCGACGGCACGTCATCG CTCTTTGGTCGCAGATTGGCAGTGCATTTGATGGTGCAGCCCGTTGCCGCTCGCCCGCTCTTGGCCGATCCTGTTGCCAG CGGGCAGGGCTTCCTCGCGCGGTTCCTTATAGCAGAACCTCAAACCGCCATAGGCTTACGTCTGGCGTCTGAGCCGCCCG CCGGGGCATCCGCCCAGCTTGCAGCATTCAACGTCCGGCTTCGCGCCATTCTGGACGCTCCTAAGCCCTTTGCAGGCGAT ACCCAGCAACAACTTGAACCGCCTCACCTGACCCTGACCCCAGATGCACGGAAGGTGCTTTGGGACTACTACGTTGAAAC CGAAACAGCCCAGCAAGCCGGTGGCAGCCTGGAAGGGCTGACCGCCTACGCGTCTAAGACGGCGGAGCAAGCTGCCCGCA TCGCAGGTGTGTTGACGCTTTGGGAAAATCTCCAAGCCCGTGAAATCCAGATTGGGATGATGAAGAGCGGGGTGCGACTG GCCCGTTTCTATTTGGGTGAAGCGAAGCGTTTGGCCGAGTCAGCGGAGATCAGTATCGAGACGGAAAAGGCAGAGCGCCT GCGGCTATGGCTACGGGATAGCTGGCCCACGATTGCCAGCGCCAACGGACGCAATCCGCAGTACGTCCTGCCGCGTGATG TGGTCCAGCACGGGCCGGGAAGCCTGCGCGAAACCAAGACCGCAAAGCAAACGCTTACCATCCTCTCGGGGCACGGTTGG ATCATGCCATTGGAGCGCGGTGCAGTGGTCGATGGGGCGTCGCGCAGGGACGCGTTTCACATTGTCAAAGACGGGCCGCC ATGA
Upstream 100 bases:
>100_bases CACTGGCAGACCGCGCTCACACGCTGGGCTGGCCCGTCTCGATCATGGCTGCGCCGGACGGGCAAGACTTCAACGATGTA TTGATGGAAAGGCGTGCGGC
Downstream 100 bases:
>100_bases CCGAGGGGACTGCTACAATTGCTACAACTGCTACAAAGCGCCTTCCAAACCGCACCGTGTAGCAAAAGTAGCAGATGTAG CAGGGGGCAGTGTTCAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MTAIKPETYTPEGPQPLLREVSPGAEYPVASLGPLREAAQAAQATTQAPMALAAQSALSVASLAVQAHGDVETLGGFAPI SLYCLTIARSGERKSATDKLLMAGLREFEREAAAEYQQAVGVWENTAEIHKNDRAQIMHGFKKATGSERVASKADLEALG AEPPAPLLPNLTATEPTLEGLHKLFLAGQPSLGMFSDEGGGFLGGHGMSQDHRLKTVAGLSALWGGDPLTRVRAGDGTSS LFGRRLAVHLMVQPVAARPLLADPVASGQGFLARFLIAEPQTAIGLRLASEPPAGASAQLAAFNVRLRAILDAPKPFAGD TQQQLEPPHLTLTPDARKVLWDYYVETETAQQAGGSLEGLTAYASKTAEQAARIAGVLTLWENLQAREIQIGMMKSGVRL ARFYLGEAKRLAESAEISIETEKAERLRLWLRDSWPTIASANGRNPQYVLPRDVVQHGPGSLRETKTAKQTLTILSGHGW IMPLERGAVVDGASRRDAFHIVKDGPP
Sequences:
>Translated_507_residues MTAIKPETYTPEGPQPLLREVSPGAEYPVASLGPLREAAQAAQATTQAPMALAAQSALSVASLAVQAHGDVETLGGFAPI SLYCLTIARSGERKSATDKLLMAGLREFEREAAAEYQQAVGVWENTAEIHKNDRAQIMHGFKKATGSERVASKADLEALG AEPPAPLLPNLTATEPTLEGLHKLFLAGQPSLGMFSDEGGGFLGGHGMSQDHRLKTVAGLSALWGGDPLTRVRAGDGTSS LFGRRLAVHLMVQPVAARPLLADPVASGQGFLARFLIAEPQTAIGLRLASEPPAGASAQLAAFNVRLRAILDAPKPFAGD TQQQLEPPHLTLTPDARKVLWDYYVETETAQQAGGSLEGLTAYASKTAEQAARIAGVLTLWENLQAREIQIGMMKSGVRL ARFYLGEAKRLAESAEISIETEKAERLRLWLRDSWPTIASANGRNPQYVLPRDVVQHGPGSLRETKTAKQTLTILSGHGW IMPLERGAVVDGASRRDAFHIVKDGPP >Mature_506_residues TAIKPETYTPEGPQPLLREVSPGAEYPVASLGPLREAAQAAQATTQAPMALAAQSALSVASLAVQAHGDVETLGGFAPIS LYCLTIARSGERKSATDKLLMAGLREFEREAAAEYQQAVGVWENTAEIHKNDRAQIMHGFKKATGSERVASKADLEALGA EPPAPLLPNLTATEPTLEGLHKLFLAGQPSLGMFSDEGGGFLGGHGMSQDHRLKTVAGLSALWGGDPLTRVRAGDGTSSL FGRRLAVHLMVQPVAARPLLADPVASGQGFLARFLIAEPQTAIGLRLASEPPAGASAQLAAFNVRLRAILDAPKPFAGDT QQQLEPPHLTLTPDARKVLWDYYVETETAQQAGGSLEGLTAYASKTAEQAARIAGVLTLWENLQAREIQIGMMKSGVRLA RFYLGEAKRLAESAEISIETEKAERLRLWLRDSWPTIASANGRNPQYVLPRDVVQHGPGSLRETKTAKQTLTILSGHGWI MPLERGAVVDGASRRDAFHIVKDGPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788978, Length=468, Percent_Identity=27.1367521367521, Blast_Score=164, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54104; Mature: 53973
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIKPETYTPEGPQPLLREVSPGAEYPVASLGPLREAAQAAQATTQAPMALAAQSALSV CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH ASLAVQAHGDVETLGGFAPISLYCLTIARSGERKSATDKLLMAGLREFEREAAAEYQQAV HHHHHHCCCCHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GVWENTAEIHKNDRAQIMHGFKKATGSERVASKADLEALGAEPPAPLLPNLTATEPTLEG HHHCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH LHKLFLAGQPSLGMFSDEGGGFLGGHGMSQDHRLKTVAGLSALWGGDPLTRVRAGDGTSS HHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHH LFGRRLAVHLMVQPVAARPLLADPVASGQGFLARFLIAEPQTAIGLRLASEPPAGASAQL HHHHHHHHHHEECHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHEEEECCCCCCCCCCEE AAFNVRLRAILDAPKPFAGDTQQQLEPPHLTLTPDARKVLWDYYVETETAQQAGGSLEGL EEHHEEEEEEECCCCCCCCCCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHH TAYASKTAEQAARIAGVLTLWENLQAREIQIGMMKSGVRLARFYLGEAKRLAESAEISIE HHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEHHHCCHHHHHHHHHHHHHHHHHCCEEEE TEKAERLRLWLRDSWPTIASANGRNPQYVLPRDVVQHGPGSLRETKTAKQTLTILSGHGW HHHHHHHHHHHHCCCCCEECCCCCCCCEECCHHHHHCCCCCHHHHHHHHHHEEEEECCCE IMPLERGAVVDGASRRDAFHIVKDGPP EEEECCCCEECCCCCCCCEEEECCCCC >Mature Secondary Structure TAIKPETYTPEGPQPLLREVSPGAEYPVASLGPLREAAQAAQATTQAPMALAAQSALSV CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH ASLAVQAHGDVETLGGFAPISLYCLTIARSGERKSATDKLLMAGLREFEREAAAEYQQAV HHHHHHCCCCHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GVWENTAEIHKNDRAQIMHGFKKATGSERVASKADLEALGAEPPAPLLPNLTATEPTLEG HHHCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH LHKLFLAGQPSLGMFSDEGGGFLGGHGMSQDHRLKTVAGLSALWGGDPLTRVRAGDGTSS HHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHH LFGRRLAVHLMVQPVAARPLLADPVASGQGFLARFLIAEPQTAIGLRLASEPPAGASAQL HHHHHHHHHHEECHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHEEEECCCCCCCCCCEE AAFNVRLRAILDAPKPFAGDTQQQLEPPHLTLTPDARKVLWDYYVETETAQQAGGSLEGL EEHHEEEEEEECCCCCCCCCCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHH TAYASKTAEQAARIAGVLTLWENLQAREIQIGMMKSGVRLARFYLGEAKRLAESAEISIE HHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEHHHCCHHHHHHHHHHHHHHHHHCCEEEE TEKAERLRLWLRDSWPTIASANGRNPQYVLPRDVVQHGPGSLRETKTAKQTLTILSGHGW HHHHHHHHHHHHCCCCCEECCCCCCCCEECCHHHHHCCCCCHHHHHHHHHHEEEEECCCE IMPLERGAVVDGASRRDAFHIVKDGPP EEEECCCCEECCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]