Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is yfjI [H]

Identifier: 89052724

GI number: 89052724

Start: 227278

End: 228801

Strand: Direct

Name: yfjI [H]

Synonym: Jann_0233

Alternate gene names: 89052724

Gene position: 227278-228801 (Clockwise)

Preceding gene: 89052723

Following gene: 89052725

Centisome position: 5.26

GC content: 61.42

Gene sequence:

>1524_bases
ATGACGGCTATCAAACCCGAAACCTACACACCGGAAGGCCCCCAGCCGTTGCTTAGGGAGGTGTCGCCGGGGGCTGAGTA
TCCTGTTGCATCCCTTGGCCCCCTGAGGGAGGCGGCACAAGCAGCGCAGGCGACGACGCAGGCCCCTATGGCCCTCGCGG
CTCAGTCTGCCTTGTCCGTGGCGTCTCTTGCGGTGCAGGCGCATGGTGACGTTGAAACTCTGGGCGGCTTCGCCCCGATC
AGCCTCTATTGCCTCACTATTGCCCGATCCGGCGAGCGCAAGAGCGCCACGGATAAGCTGTTGATGGCTGGGCTGCGTGA
GTTTGAGCGCGAGGCGGCGGCAGAATATCAGCAAGCGGTTGGCGTTTGGGAAAACACGGCTGAGATACACAAAAACGACC
GGGCGCAGATCATGCACGGGTTTAAGAAGGCCACGGGTTCCGAACGGGTGGCATCGAAGGCTGACTTAGAAGCCTTGGGT
GCAGAGCCGCCAGCGCCGTTATTGCCAAACCTGACCGCGACCGAGCCAACCCTTGAGGGGCTGCACAAGCTGTTTTTGGC
GGGCCAGCCTTCGTTGGGTATGTTCTCAGATGAAGGAGGCGGCTTTCTGGGCGGACACGGCATGTCGCAGGATCACCGCT
TGAAGACAGTGGCGGGACTGTCTGCCTTATGGGGTGGTGATCCATTGACACGAGTGCGCGCTGGCGACGGCACGTCATCG
CTCTTTGGTCGCAGATTGGCAGTGCATTTGATGGTGCAGCCCGTTGCCGCTCGCCCGCTCTTGGCCGATCCTGTTGCCAG
CGGGCAGGGCTTCCTCGCGCGGTTCCTTATAGCAGAACCTCAAACCGCCATAGGCTTACGTCTGGCGTCTGAGCCGCCCG
CCGGGGCATCCGCCCAGCTTGCAGCATTCAACGTCCGGCTTCGCGCCATTCTGGACGCTCCTAAGCCCTTTGCAGGCGAT
ACCCAGCAACAACTTGAACCGCCTCACCTGACCCTGACCCCAGATGCACGGAAGGTGCTTTGGGACTACTACGTTGAAAC
CGAAACAGCCCAGCAAGCCGGTGGCAGCCTGGAAGGGCTGACCGCCTACGCGTCTAAGACGGCGGAGCAAGCTGCCCGCA
TCGCAGGTGTGTTGACGCTTTGGGAAAATCTCCAAGCCCGTGAAATCCAGATTGGGATGATGAAGAGCGGGGTGCGACTG
GCCCGTTTCTATTTGGGTGAAGCGAAGCGTTTGGCCGAGTCAGCGGAGATCAGTATCGAGACGGAAAAGGCAGAGCGCCT
GCGGCTATGGCTACGGGATAGCTGGCCCACGATTGCCAGCGCCAACGGACGCAATCCGCAGTACGTCCTGCCGCGTGATG
TGGTCCAGCACGGGCCGGGAAGCCTGCGCGAAACCAAGACCGCAAAGCAAACGCTTACCATCCTCTCGGGGCACGGTTGG
ATCATGCCATTGGAGCGCGGTGCAGTGGTCGATGGGGCGTCGCGCAGGGACGCGTTTCACATTGTCAAAGACGGGCCGCC
ATGA

Upstream 100 bases:

>100_bases
CACTGGCAGACCGCGCTCACACGCTGGGCTGGCCCGTCTCGATCATGGCTGCGCCGGACGGGCAAGACTTCAACGATGTA
TTGATGGAAAGGCGTGCGGC

Downstream 100 bases:

>100_bases
CCGAGGGGACTGCTACAATTGCTACAACTGCTACAAAGCGCCTTCCAAACCGCACCGTGTAGCAAAAGTAGCAGATGTAG
CAGGGGGCAGTGTTCAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MTAIKPETYTPEGPQPLLREVSPGAEYPVASLGPLREAAQAAQATTQAPMALAAQSALSVASLAVQAHGDVETLGGFAPI
SLYCLTIARSGERKSATDKLLMAGLREFEREAAAEYQQAVGVWENTAEIHKNDRAQIMHGFKKATGSERVASKADLEALG
AEPPAPLLPNLTATEPTLEGLHKLFLAGQPSLGMFSDEGGGFLGGHGMSQDHRLKTVAGLSALWGGDPLTRVRAGDGTSS
LFGRRLAVHLMVQPVAARPLLADPVASGQGFLARFLIAEPQTAIGLRLASEPPAGASAQLAAFNVRLRAILDAPKPFAGD
TQQQLEPPHLTLTPDARKVLWDYYVETETAQQAGGSLEGLTAYASKTAEQAARIAGVLTLWENLQAREIQIGMMKSGVRL
ARFYLGEAKRLAESAEISIETEKAERLRLWLRDSWPTIASANGRNPQYVLPRDVVQHGPGSLRETKTAKQTLTILSGHGW
IMPLERGAVVDGASRRDAFHIVKDGPP

Sequences:

>Translated_507_residues
MTAIKPETYTPEGPQPLLREVSPGAEYPVASLGPLREAAQAAQATTQAPMALAAQSALSVASLAVQAHGDVETLGGFAPI
SLYCLTIARSGERKSATDKLLMAGLREFEREAAAEYQQAVGVWENTAEIHKNDRAQIMHGFKKATGSERVASKADLEALG
AEPPAPLLPNLTATEPTLEGLHKLFLAGQPSLGMFSDEGGGFLGGHGMSQDHRLKTVAGLSALWGGDPLTRVRAGDGTSS
LFGRRLAVHLMVQPVAARPLLADPVASGQGFLARFLIAEPQTAIGLRLASEPPAGASAQLAAFNVRLRAILDAPKPFAGD
TQQQLEPPHLTLTPDARKVLWDYYVETETAQQAGGSLEGLTAYASKTAEQAARIAGVLTLWENLQAREIQIGMMKSGVRL
ARFYLGEAKRLAESAEISIETEKAERLRLWLRDSWPTIASANGRNPQYVLPRDVVQHGPGSLRETKTAKQTLTILSGHGW
IMPLERGAVVDGASRRDAFHIVKDGPP
>Mature_506_residues
TAIKPETYTPEGPQPLLREVSPGAEYPVASLGPLREAAQAAQATTQAPMALAAQSALSVASLAVQAHGDVETLGGFAPIS
LYCLTIARSGERKSATDKLLMAGLREFEREAAAEYQQAVGVWENTAEIHKNDRAQIMHGFKKATGSERVASKADLEALGA
EPPAPLLPNLTATEPTLEGLHKLFLAGQPSLGMFSDEGGGFLGGHGMSQDHRLKTVAGLSALWGGDPLTRVRAGDGTSSL
FGRRLAVHLMVQPVAARPLLADPVASGQGFLARFLIAEPQTAIGLRLASEPPAGASAQLAAFNVRLRAILDAPKPFAGDT
QQQLEPPHLTLTPDARKVLWDYYVETETAQQAGGSLEGLTAYASKTAEQAARIAGVLTLWENLQAREIQIGMMKSGVRLA
RFYLGEAKRLAESAEISIETEKAERLRLWLRDSWPTIASANGRNPQYVLPRDVVQHGPGSLRETKTAKQTLTILSGHGWI
MPLERGAVVDGASRRDAFHIVKDGPP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788978, Length=468, Percent_Identity=27.1367521367521, Blast_Score=164, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54104; Mature: 53973

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIKPETYTPEGPQPLLREVSPGAEYPVASLGPLREAAQAAQATTQAPMALAAQSALSV
CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH
ASLAVQAHGDVETLGGFAPISLYCLTIARSGERKSATDKLLMAGLREFEREAAAEYQQAV
HHHHHHCCCCHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GVWENTAEIHKNDRAQIMHGFKKATGSERVASKADLEALGAEPPAPLLPNLTATEPTLEG
HHHCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
LHKLFLAGQPSLGMFSDEGGGFLGGHGMSQDHRLKTVAGLSALWGGDPLTRVRAGDGTSS
HHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHH
LFGRRLAVHLMVQPVAARPLLADPVASGQGFLARFLIAEPQTAIGLRLASEPPAGASAQL
HHHHHHHHHHEECHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHEEEECCCCCCCCCCEE
AAFNVRLRAILDAPKPFAGDTQQQLEPPHLTLTPDARKVLWDYYVETETAQQAGGSLEGL
EEHHEEEEEEECCCCCCCCCCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHH
TAYASKTAEQAARIAGVLTLWENLQAREIQIGMMKSGVRLARFYLGEAKRLAESAEISIE
HHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEHHHCCHHHHHHHHHHHHHHHHHCCEEEE
TEKAERLRLWLRDSWPTIASANGRNPQYVLPRDVVQHGPGSLRETKTAKQTLTILSGHGW
HHHHHHHHHHHHCCCCCEECCCCCCCCEECCHHHHHCCCCCHHHHHHHHHHEEEEECCCE
IMPLERGAVVDGASRRDAFHIVKDGPP
EEEECCCCEECCCCCCCCEEEECCCCC
>Mature Secondary Structure 
TAIKPETYTPEGPQPLLREVSPGAEYPVASLGPLREAAQAAQATTQAPMALAAQSALSV
CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH
ASLAVQAHGDVETLGGFAPISLYCLTIARSGERKSATDKLLMAGLREFEREAAAEYQQAV
HHHHHHCCCCHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GVWENTAEIHKNDRAQIMHGFKKATGSERVASKADLEALGAEPPAPLLPNLTATEPTLEG
HHHCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
LHKLFLAGQPSLGMFSDEGGGFLGGHGMSQDHRLKTVAGLSALWGGDPLTRVRAGDGTSS
HHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHH
LFGRRLAVHLMVQPVAARPLLADPVASGQGFLARFLIAEPQTAIGLRLASEPPAGASAQL
HHHHHHHHHHEECHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHEEEECCCCCCCCCCEE
AAFNVRLRAILDAPKPFAGDTQQQLEPPHLTLTPDARKVLWDYYVETETAQQAGGSLEGL
EEHHEEEEEEECCCCCCCCCCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHH
TAYASKTAEQAARIAGVLTLWENLQAREIQIGMMKSGVRLARFYLGEAKRLAESAEISIE
HHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEHHHCCHHHHHHHHHHHHHHHHHCCEEEE
TEKAERLRLWLRDSWPTIASANGRNPQYVLPRDVVQHGPGSLRETKTAKQTLTILSGHGW
HHHHHHHHHHHHCCCCCEECCCCCCCCEECCHHHHHCCCCCHHHHHHHHHHEEEEECCCE
IMPLERGAVVDGASRRDAFHIVKDGPP
EEEECCCCEECCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]