Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052722

Identifier: 89052722

GI number: 89052722

Start: 225859

End: 226209

Strand: Direct

Name: 89052722

Synonym: Jann_0231

Alternate gene names: NA

Gene position: 225859-226209 (Clockwise)

Preceding gene: 89052721

Following gene: 89052723

Centisome position: 5.23

GC content: 58.4

Gene sequence:

>351_bases
ATGAAAACCTCCGATGGCATCCCGCCGAAAGACACCCGCCGCATCTATGGCTGGCACAACCTTCCGAACACCTACAAGGC
GGCGCGCTACCGCATCACCGATCCGGGCCAAGAGCCGCGCGTGATCACCGTGTCACGAAAGAAACGCCAAGTGCTTGAAG
GCCTGATGCGCTCGCCGCTTCATTCGGCTAGCTATTGCCGCCTGTCAGATACTGTGATGCCCCTACGCCGTGATCATGGT
GTTGATATCGAGTGCACGCTCTACAAGAGCGACACAGACACCGGGCGCGACAAGTTCGGCGTTTATACCCTCAGTTCCAA
GGTTGAGCGCATCGACGGGGAGGGCGAATAA

Upstream 100 bases:

>100_bases
CCCACCCGAATTGCCGGGCGGGGCGCATTGTCTTAGCGGCGTCAACAACCGCGACATTAGCGCATTCGGCCCGGTCCTTC
AAGAATAAGGACCAACACCA

Downstream 100 bases:

>100_bases
TGACCGCCACAACATCCCCCATCCACATCGTCACACCCATTGCGGGCACTGTTCGGTGGTCACGTTCCGGCCGGAATCTG
GGCGTCTGGGGCAGGGACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MKTSDGIPPKDTRRIYGWHNLPNTYKAARYRITDPGQEPRVITVSRKKRQVLEGLMRSPLHSASYCRLSDTVMPLRRDHG
VDIECTLYKSDTDTGRDKFGVYTLSSKVERIDGEGE

Sequences:

>Translated_116_residues
MKTSDGIPPKDTRRIYGWHNLPNTYKAARYRITDPGQEPRVITVSRKKRQVLEGLMRSPLHSASYCRLSDTVMPLRRDHG
VDIECTLYKSDTDTGRDKFGVYTLSSKVERIDGEGE
>Mature_116_residues
MKTSDGIPPKDTRRIYGWHNLPNTYKAARYRITDPGQEPRVITVSRKKRQVLEGLMRSPLHSASYCRLSDTVMPLRRDHG
VDIECTLYKSDTDTGRDKFGVYTLSSKVERIDGEGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13287; Mature: 13287

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSDGIPPKDTRRIYGWHNLPNTYKAARYRITDPGQEPRVITVSRKKRQVLEGLMRSPL
CCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCEEEEECHHHHHHHHHHHHCCC
HSASYCRLSDTVMPLRRDHGVDIECTLYKSDTDTGRDKFGVYTLSSKVERIDGEGE
CCCCEEEECCCCCCHHCCCCCCEEEEEEECCCCCCCCCEEEEECCCHHHHCCCCCC
>Mature Secondary Structure
MKTSDGIPPKDTRRIYGWHNLPNTYKAARYRITDPGQEPRVITVSRKKRQVLEGLMRSPL
CCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCEEEEECHHHHHHHHHHHHCCC
HSASYCRLSDTVMPLRRDHGVDIECTLYKSDTDTGRDKFGVYTLSSKVERIDGEGE
CCCCEEEECCCCCCHHCCCCCCEEEEEEECCCCCCCCCEEEEECCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA