| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052711
Identifier: 89052711
GI number: 89052711
Start: 215097
End: 216107
Strand: Direct
Name: 89052711
Synonym: Jann_0220
Alternate gene names: NA
Gene position: 215097-216107 (Clockwise)
Preceding gene: 89052710
Following gene: 89052712
Centisome position: 4.98
GC content: 56.78
Gene sequence:
>1011_bases ATGAAAGCGATCAAGCGTTACGGTTTGCGCCTTGAACGCAAGCGTTTCCTTGTACGCGCGTGGCGAAAATCTCGCGGCGT GGAGCCTATTGCTGACCGCACGGATGCGATCAAAGAAGGCGATATCCTGTGCTTCTGCACGCTCCGGAATGAGAGGGTGC GCCTGACGTATTTCTTGAACTACTACCGCGAACGTGGCGTGAATCATTTCCTGTTCGTGGATAATGATAGCGGCGACGGC ACCCGTGAGTATCTGGCAGACCAGCCCGATTGCTCTGTCTGGTGGACGGACGATAGCTACAAACGGTCGCGCTTCGGGAT GGATTGGATCAACCGCCTGCTGCGCCTTCACGGGCACAAACACTGGTGTCTGACAGTCGATCCGGATGAATTCCTTGTCT ACCCGTTCTCGGATACGCGGCCCATACCGGCGCTGACGGACTGGCTTGATGCGTCATCCATCAAATCCTTCGGCGCGATG TTGCTGGATATGTACCCCAAAGGGCCCATCGACGCGCAGCCCTACCGGGAGGGGCAGAACCCCTTTGATATTGCCTGCTG GTTTGACGCCGGAAACTACTCGGTCACGCGGAACTGGGACTACGGCAACCTGTGGATCCAGGGCGGCCCGCGCGCGCGCA GTTTCTTTGCCGACAATCCCAAACGTGCACCTGCATTGAACAAGACGCCTTTGGTGAACTGGCAGAAGCACTACACCTAT GCGTCGTCGACCCACATGCTGCTGCCGCGAGGGCTTAACAGAGTTTACGATGAATGGGGGGGTGAGAAGGCGTCGGGCGT ATTGCTGCACGCCAAATTCCTCGACACATTCAGCGTCAAAGCCAAGGAAGAACTGGACCGGAGAGAGCATTACGCGGCCT CTGCCGAATACAAGGCCTACGCCAACGGAATGAAGGAAAACCCGGAGTTCTGGACGAAATGGTCTGAGAAATACATCAAC TGGCGGCAGCTGGAGATCCTTGGCCTCATGTCCAAGGGCAATTGGGCATGA
Upstream 100 bases:
>100_bases CTGTTAAGCCGGAGTTGACCATGTTGAAGGGTCCAACTTGGGCTGAGCACTTTGATAAGGTGGCGCAAGCCATCCAACCG CCCGGCAGGAAAGGCCGCCA
Downstream 100 bases:
>100_bases GCACGCTTGGGTTCGTGATGATGTGCCATACCGCGCTGGACCGTGCGGCAGAAGTGGCGCGCCATTGGGCGGAACGCGAT TGTCCCGTGGTGATCCACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKAIKRYGLRLERKRFLVRAWRKSRGVEPIADRTDAIKEGDILCFCTLRNERVRLTYFLNYYRERGVNHFLFVDNDSGDG TREYLADQPDCSVWWTDDSYKRSRFGMDWINRLLRLHGHKHWCLTVDPDEFLVYPFSDTRPIPALTDWLDASSIKSFGAM LLDMYPKGPIDAQPYREGQNPFDIACWFDAGNYSVTRNWDYGNLWIQGGPRARSFFADNPKRAPALNKTPLVNWQKHYTY ASSTHMLLPRGLNRVYDEWGGEKASGVLLHAKFLDTFSVKAKEELDRREHYAASAEYKAYANGMKENPEFWTKWSEKYIN WRQLEILGLMSKGNWA
Sequences:
>Translated_336_residues MKAIKRYGLRLERKRFLVRAWRKSRGVEPIADRTDAIKEGDILCFCTLRNERVRLTYFLNYYRERGVNHFLFVDNDSGDG TREYLADQPDCSVWWTDDSYKRSRFGMDWINRLLRLHGHKHWCLTVDPDEFLVYPFSDTRPIPALTDWLDASSIKSFGAM LLDMYPKGPIDAQPYREGQNPFDIACWFDAGNYSVTRNWDYGNLWIQGGPRARSFFADNPKRAPALNKTPLVNWQKHYTY ASSTHMLLPRGLNRVYDEWGGEKASGVLLHAKFLDTFSVKAKEELDRREHYAASAEYKAYANGMKENPEFWTKWSEKYIN WRQLEILGLMSKGNWA >Mature_336_residues MKAIKRYGLRLERKRFLVRAWRKSRGVEPIADRTDAIKEGDILCFCTLRNERVRLTYFLNYYRERGVNHFLFVDNDSGDG TREYLADQPDCSVWWTDDSYKRSRFGMDWINRLLRLHGHKHWCLTVDPDEFLVYPFSDTRPIPALTDWLDASSIKSFGAM LLDMYPKGPIDAQPYREGQNPFDIACWFDAGNYSVTRNWDYGNLWIQGGPRARSFFADNPKRAPALNKTPLVNWQKHYTY ASSTHMLLPRGLNRVYDEWGGEKASGVLLHAKFLDTFSVKAKEELDRREHYAASAEYKAYANGMKENPEFWTKWSEKYIN WRQLEILGLMSKGNWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39489; Mature: 39489
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAIKRYGLRLERKRFLVRAWRKSRGVEPIADRTDAIKEGDILCFCTLRNERVRLTYFLN CCCHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEECCCEEEEEHHHH YYRERGVNHFLFVDNDSGDGTREYLADQPDCSVWWTDDSYKRSRFGMDWINRLLRLHGHK HHHHCCCEEEEEEECCCCCCHHHHHCCCCCCEEEECCCCHHHHHCCHHHHHHHHHHCCCC HWCLTVDPDEFLVYPFSDTRPIPALTDWLDASSIKSFGAMLLDMYPKGPIDAQPYREGQN EEEEEECCCCEEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PFDIACWFDAGNYSVTRNWDYGNLWIQGGPRARSFFADNPKRAPALNKTPLVNWQKHYTY CEEEEEEEECCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEE ASSTHMLLPRGLNRVYDEWGGEKASGVLLHAKFLDTFSVKAKEELDRREHYAASAEYKAY CCCCEEECHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHCCCCHHHH ANGMKENPEFWTKWSEKYINWRQLEILGLMSKGNWA HCCCCCCCHHHHHHHHHHCCEEEEEEEEEECCCCCC >Mature Secondary Structure MKAIKRYGLRLERKRFLVRAWRKSRGVEPIADRTDAIKEGDILCFCTLRNERVRLTYFLN CCCHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEECCCEEEEEHHHH YYRERGVNHFLFVDNDSGDGTREYLADQPDCSVWWTDDSYKRSRFGMDWINRLLRLHGHK HHHHCCCEEEEEEECCCCCCHHHHHCCCCCCEEEECCCCHHHHHCCHHHHHHHHHHCCCC HWCLTVDPDEFLVYPFSDTRPIPALTDWLDASSIKSFGAMLLDMYPKGPIDAQPYREGQN EEEEEECCCCEEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PFDIACWFDAGNYSVTRNWDYGNLWIQGGPRARSFFADNPKRAPALNKTPLVNWQKHYTY CEEEEEEEECCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEE ASSTHMLLPRGLNRVYDEWGGEKASGVLLHAKFLDTFSVKAKEELDRREHYAASAEYKAY CCCCEEECHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCHHHHHHHHHHHHHCCCCHHHH ANGMKENPEFWTKWSEKYINWRQLEILGLMSKGNWA HCCCCCCCHHHHHHHHHHCCEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA