| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052710
Identifier: 89052710
GI number: 89052710
Start: 213853
End: 215100
Strand: Direct
Name: 89052710
Synonym: Jann_0219
Alternate gene names: NA
Gene position: 213853-215100 (Clockwise)
Preceding gene: 89052709
Following gene: 89052711
Centisome position: 4.95
GC content: 60.5
Gene sequence:
>1248_bases ATGTCAGGGCTGCGTGATATTCCGGGCCTCTGGCTGGATATCACCCGGCTTCTGACGCGCGTTGGACGCGGTGCGCTGAC AGGGATTGACCGGGTCGAGGCGGCGTATCTGGCCGAGGCGCTGGCGGGTGACGCAAAGTTCCTGTGTCGCACGACCCGCG GCTATCTTCTTCTGGACCAGACCGGTGGGCGCGCCCTTTTTGATCTATGCAATGGTGCTGTGATGGGCCGTGCGGATTGG ATATCGCGGCTGACTTTGCGGGGCCACAAACCTCGTCACCGGGCGGAGGCTGTTCTGCGGCGTCACGCGGTCGCCCGGTG CAGACCCGCTGCCTTGCCCAAATTTCTGCAAAATCACGCCGCGCCCGGGTCCACCTATGTCAATGTCGGCCATTCCAACC TGTCGGAGGCGACACTTTCCGCAGTGTCCGGCCAGTTCAGCAATTGCGCCGTTCTGATCCACGATCTTATCCCGCTGACC CACCCCGCCTACGTCGCCGATGATATGCCCGCGCGATTTGCCGGGCGGATGGACCGCGTTCGGCGATATGCGGATCTGGT GATCTGCAATTCCTCTGCCACCCAGTTCGACCTTATCGCCCATTGGGGGGACGGCCAAACGGTGAAGCCGAAATACATCG TCGCCCATCCGGGCGTGACGCCCCGCCCGCGTTCCGATGACCTGGACCGGGATGCTGGCCATTTCGTCATGTTGGGGACG ATTGAGGCGCGTAAAAATCATGATCTGATGCTCGATGTCTGGGAGCTTCTGGCGCAGGACATGCCGCGCGATCAGATGCC GACCCTGCACATCATAGGTGCGGTTGGCTGGAAGGTAGACGCGCTGATGGAGCGTCTGAGATCGCATCCCTTGTATGGCG ACAAAATTCTGCTGAACGGGCCGTATGGGGTGCTGGATGACCATGCGGTGCAGGACCATCTGGCGCGGGCCACGGCGCTT CTGTTCCCGTCGCTTGCGGAGGGTTACGGCTTTCCGCCGCTGGAGGCTGCGATGGCCGGGGCTGTTCCGATCTGCTCAAA CCTGGCGGTTTTCAGGGAAACCCTAGGCGATTGTGCCGTTTACGTGGACAATAACGACGCCTATTCTTGGGTAGAAACGA TTAAACAACACTTTTACGGTACTGCTGTTAAGCCGGAGTTGACCATGTTGAAGGGTCCAACTTGGGCTGAGCACTTTGAT AAGGTGGCGCAAGCCATCCAACCGCCCGGCAGGAAAGGCCGCCAATGA
Upstream 100 bases:
>100_bases GGTGGCGTTTGGTCTGGCGCGTGATGATCTTCGGGATGAGTTTCAGGATTACCTCGCCGACATGATGTCTGCCCGAAGCG CGGCCCAGTAAGCGGCCACG
Downstream 100 bases:
>100_bases AAGCGATCAAGCGTTACGGTTTGCGCCTTGAACGCAAGCGTTTCCTTGTACGCGCGTGGCGAAAATCTCGCGGCGTGGAG CCTATTGCTGACCGCACGGA
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase; Glycosyl Transferase Group 1 Protein; Glycosyl Transferase Group 1 Family Protein; Mannosyltransferase; Glycosyltransferase WbpX; Mannosyltransferase A; Lipopolysaccharide N-Acetylglucosaminyltransferase I; Mannosyl Transferase B; Glycosyl Transferase Protein; Glycosyltransferase Protein; Lipopolysaccharide N-Acetylglucosaminyltransferase II; Glycosyltransferase WbpY
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MSGLRDIPGLWLDITRLLTRVGRGALTGIDRVEAAYLAEALAGDAKFLCRTTRGYLLLDQTGGRALFDLCNGAVMGRADW ISRLTLRGHKPRHRAEAVLRRHAVARCRPAALPKFLQNHAAPGSTYVNVGHSNLSEATLSAVSGQFSNCAVLIHDLIPLT HPAYVADDMPARFAGRMDRVRRYADLVICNSSATQFDLIAHWGDGQTVKPKYIVAHPGVTPRPRSDDLDRDAGHFVMLGT IEARKNHDLMLDVWELLAQDMPRDQMPTLHIIGAVGWKVDALMERLRSHPLYGDKILLNGPYGVLDDHAVQDHLARATAL LFPSLAEGYGFPPLEAAMAGAVPICSNLAVFRETLGDCAVYVDNNDAYSWVETIKQHFYGTAVKPELTMLKGPTWAEHFD KVAQAIQPPGRKGRQ
Sequences:
>Translated_415_residues MSGLRDIPGLWLDITRLLTRVGRGALTGIDRVEAAYLAEALAGDAKFLCRTTRGYLLLDQTGGRALFDLCNGAVMGRADW ISRLTLRGHKPRHRAEAVLRRHAVARCRPAALPKFLQNHAAPGSTYVNVGHSNLSEATLSAVSGQFSNCAVLIHDLIPLT HPAYVADDMPARFAGRMDRVRRYADLVICNSSATQFDLIAHWGDGQTVKPKYIVAHPGVTPRPRSDDLDRDAGHFVMLGT IEARKNHDLMLDVWELLAQDMPRDQMPTLHIIGAVGWKVDALMERLRSHPLYGDKILLNGPYGVLDDHAVQDHLARATAL LFPSLAEGYGFPPLEAAMAGAVPICSNLAVFRETLGDCAVYVDNNDAYSWVETIKQHFYGTAVKPELTMLKGPTWAEHFD KVAQAIQPPGRKGRQ >Mature_414_residues SGLRDIPGLWLDITRLLTRVGRGALTGIDRVEAAYLAEALAGDAKFLCRTTRGYLLLDQTGGRALFDLCNGAVMGRADWI SRLTLRGHKPRHRAEAVLRRHAVARCRPAALPKFLQNHAAPGSTYVNVGHSNLSEATLSAVSGQFSNCAVLIHDLIPLTH PAYVADDMPARFAGRMDRVRRYADLVICNSSATQFDLIAHWGDGQTVKPKYIVAHPGVTPRPRSDDLDRDAGHFVMLGTI EARKNHDLMLDVWELLAQDMPRDQMPTLHIIGAVGWKVDALMERLRSHPLYGDKILLNGPYGVLDDHAVQDHLARATALL FPSLAEGYGFPPLEAAMAGAVPICSNLAVFRETLGDCAVYVDNNDAYSWVETIKQHFYGTAVKPELTMLKGPTWAEHFDK VAQAIQPPGRKGRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45674; Mature: 45543
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLRDIPGLWLDITRLLTRVGRGALTGIDRVEAAYLAEALAGDAKFLCRTTRGYLLLDQ CCCCCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHCCCHHHEEECCCCEEEEEC TGGRALFDLCNGAVMGRADWISRLTLRGHKPRHRAEAVLRRHAVARCRPAALPKFLQNHA CCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCC APGSTYVNVGHSNLSEATLSAVSGQFSNCAVLIHDLIPLTHPAYVADDMPARFAGRMDRV CCCCCEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHH RRYADLVICNSSATQFDLIAHWGDGQTVKPKYIVAHPGVTPRPRSDDLDRDAGHFVMLGT HHHHHEEEECCCCCEEEEEEEECCCCEECCCEEEECCCCCCCCCCCCCCCCCCCEEEEEE IEARKNHDLMLDVWELLAQDMPRDQMPTLHIIGAVGWKVDALMERLRSHPLYGDKILLNG EECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHCHHHHHHHHHHHHCCCCCCEEEEEC PYGVLDDHAVQDHLARATALLFPSLAEGYGFPPLEAAMAGAVPICSNLAVFRETLGDCAV CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCEEE YVDNNDAYSWVETIKQHFYGTAVKPELTMLKGPTWAEHFDKVAQAIQPPGRKGRQ EEECCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SGLRDIPGLWLDITRLLTRVGRGALTGIDRVEAAYLAEALAGDAKFLCRTTRGYLLLDQ CCCCCCCHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHCCCHHHEEECCCCEEEEEC TGGRALFDLCNGAVMGRADWISRLTLRGHKPRHRAEAVLRRHAVARCRPAALPKFLQNHA CCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCC APGSTYVNVGHSNLSEATLSAVSGQFSNCAVLIHDLIPLTHPAYVADDMPARFAGRMDRV CCCCCEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHH RRYADLVICNSSATQFDLIAHWGDGQTVKPKYIVAHPGVTPRPRSDDLDRDAGHFVMLGT HHHHHEEEECCCCCEEEEEEEECCCCEECCCEEEECCCCCCCCCCCCCCCCCCCEEEEEE IEARKNHDLMLDVWELLAQDMPRDQMPTLHIIGAVGWKVDALMERLRSHPLYGDKILLNG EECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHCHHHHHHHHHHHHCCCCCCEEEEEC PYGVLDDHAVQDHLARATALLFPSLAEGYGFPPLEAAMAGAVPICSNLAVFRETLGDCAV CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCEEE YVDNNDAYSWVETIKQHFYGTAVKPELTMLKGPTWAEHFDKVAQAIQPPGRKGRQ EEECCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA