| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052712
Identifier: 89052712
GI number: 89052712
Start: 216104
End: 217804
Strand: Direct
Name: 89052712
Synonym: Jann_0221
Alternate gene names: NA
Gene position: 216104-217804 (Clockwise)
Preceding gene: 89052711
Following gene: 89052713
Centisome position: 5.0
GC content: 60.55
Gene sequence:
>1701_bases ATGAGCACGCTTGGGTTCGTGATGATGTGCCATACCGCGCTGGACCGTGCGGCAGAAGTGGCGCGCCATTGGGCGGAACG CGATTGTCCCGTGGTGATCCACCTCGATAAACGCGTCGCGAAAGAGCGGGACGTTTGGCTGAAGCGAGAGCTCTCGGACC TGGACAACGTCAAATTCTGCAAGCGCCACAAGTGCGAATGGGGCACGTGGAGCCTTGTGCAGGCGAGCCAGACCGGCGCC GAGATGATGTTGGAAGAATTTCCCGGCGTGCGGCATGTCTATCTGGCGTCCGGGTCCTGCCTGCCCCTGCGCCAGGTGGA TGAGTTGCGCGCTTATCTGGCCGCGCGACCGATGACGGATTTCATCGAAAGCGTTACCATCCGCGATGTGGATTGGACTG TGGACGGCCTCAACACCGAACGCTTTCAGTTCCGGTTTCCGTTCTCCTGGAAGCGGCACAGGTTCCTGTTTGATCGCTAC GTGGAGCTTCAGCGCAGCACAGGCTTCAAACGCAAACTGCCTGATGGGTTGCAACCGCATCTGGGCAGCCAATGGTGGTG CCTGTCACGACAGACCTTGTCGGCCATTTTGCAAGATCCGGCCCGGCGGGAGTTTGACCGTTACTTCAAGCTGGTCTGGA TCCCGGACGAATCCTATTATCAGACCCTCGTGCGCAATTACTCCCGCAACATCGAAAGCCGGTCGCTGACCCTGTCGAAG TTTGATTTCCAGGGCAAACCGCACGTGTTCTATGACGATCATCTGCATTTGCTGCGCCGGTCCGATTGCTTTGTGGCGCG CAAGATCTGGCCCCGCGCCGACCGGCTTTACCGCACGTTCCTGAACGATGACGCGGCGGATGCACGCAAGGCGGAGCCGA CACCTGGCAAGATCGACCGCGTTTTCGCCAAGGCGCTGGAGCGTCGGACACGCGGGCGGCCCGGCCTGTATATGCAGTCG CGGTTTCCCAACAATGACTGGGAGAATGGGAAGACCGCCGCGCCATATTCCGTGCTCCACGGCTTCAATGAGTTGTTTCT GGACTTTGAGCCATGGCTGTCGCGACGGCTTGGCACCTCTGTGCATGGCAACATCTTCAGTCCCAAGCGGGTGCGCTTTG CGGGGGATGCGGATACGTTTGCCGGGTGCCTCTCCGCCGCGCCGGAATTGCGGGACTATAACCCGGAGCGGTTCCTCACC AGTCTGATCTGGAACACCCGCGGCGAACGTCAGGTGTTCATGTTCGGGCCGGAAGACAACCAACGGCCCGGGGCATTCAT GGCGGCTGACAGCAATGCCCAGATCAGTGTCATTACCGGCGCGTGGGCGGTGCGTCTGTTCACCGCCAACCGCAATTTCG GCGATATCCGCACGGAGGCCGCGCGCCTACAGCGGCGTGAGGTCGAGTTCGTGAACACGCTGCGCCACGTCCGCTCCCGC GCTGAAATCCGGATCTGGTCCCTGGCGGAGTTTCTTGAAGAGCCGATGGAAAACCTACAACGGATTCTGGATGCGATGGA GGGCGCGCAGGCCAGCCGCCTGACCGAAGCGCCGAAGATGGCCAATCTGGCGGGTTTGCCGAAATTCCTTCAAAACCTGA AAAACCAGGGAATGAACCCCTTTGCCGTGGGTGATTTCCCGCAAGAAGGCGTCGCGCCGCTTCCTGCCGGTGCCGACAAC CGCCCATATCTGGTGAGATAG
Upstream 100 bases:
>100_bases GAATGAAGGAAAACCCGGAGTTCTGGACGAAATGGTCTGAGAAATACATCAACTGGCGGCAGCTGGAGATCCTTGGCCTC ATGTCCAAGGGCAATTGGGC
Downstream 100 bases:
>100_bases CCCATGGCCGGTCGTTTCGATGCTTTCGTGTTGTTCGCCGAGATGCGGACGGGCTCCAACTACCTGGAAGACAGCCTCAA CACCTTCGCGGATATCAACT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: EpsK Domain Protein; Glycosyl Transferase Family; Glycosyl Transferase Family Protein; Family; EpsK Domain-Containing Protein; Core-2/I-Branching Family
Number of amino acids: Translated: 566; Mature: 565
Protein sequence:
>566_residues MSTLGFVMMCHTALDRAAEVARHWAERDCPVVIHLDKRVAKERDVWLKRELSDLDNVKFCKRHKCEWGTWSLVQASQTGA EMMLEEFPGVRHVYLASGSCLPLRQVDELRAYLAARPMTDFIESVTIRDVDWTVDGLNTERFQFRFPFSWKRHRFLFDRY VELQRSTGFKRKLPDGLQPHLGSQWWCLSRQTLSAILQDPARREFDRYFKLVWIPDESYYQTLVRNYSRNIESRSLTLSK FDFQGKPHVFYDDHLHLLRRSDCFVARKIWPRADRLYRTFLNDDAADARKAEPTPGKIDRVFAKALERRTRGRPGLYMQS RFPNNDWENGKTAAPYSVLHGFNELFLDFEPWLSRRLGTSVHGNIFSPKRVRFAGDADTFAGCLSAAPELRDYNPERFLT SLIWNTRGERQVFMFGPEDNQRPGAFMAADSNAQISVITGAWAVRLFTANRNFGDIRTEAARLQRREVEFVNTLRHVRSR AEIRIWSLAEFLEEPMENLQRILDAMEGAQASRLTEAPKMANLAGLPKFLQNLKNQGMNPFAVGDFPQEGVAPLPAGADN RPYLVR
Sequences:
>Translated_566_residues MSTLGFVMMCHTALDRAAEVARHWAERDCPVVIHLDKRVAKERDVWLKRELSDLDNVKFCKRHKCEWGTWSLVQASQTGA EMMLEEFPGVRHVYLASGSCLPLRQVDELRAYLAARPMTDFIESVTIRDVDWTVDGLNTERFQFRFPFSWKRHRFLFDRY VELQRSTGFKRKLPDGLQPHLGSQWWCLSRQTLSAILQDPARREFDRYFKLVWIPDESYYQTLVRNYSRNIESRSLTLSK FDFQGKPHVFYDDHLHLLRRSDCFVARKIWPRADRLYRTFLNDDAADARKAEPTPGKIDRVFAKALERRTRGRPGLYMQS RFPNNDWENGKTAAPYSVLHGFNELFLDFEPWLSRRLGTSVHGNIFSPKRVRFAGDADTFAGCLSAAPELRDYNPERFLT SLIWNTRGERQVFMFGPEDNQRPGAFMAADSNAQISVITGAWAVRLFTANRNFGDIRTEAARLQRREVEFVNTLRHVRSR AEIRIWSLAEFLEEPMENLQRILDAMEGAQASRLTEAPKMANLAGLPKFLQNLKNQGMNPFAVGDFPQEGVAPLPAGADN RPYLVR >Mature_565_residues STLGFVMMCHTALDRAAEVARHWAERDCPVVIHLDKRVAKERDVWLKRELSDLDNVKFCKRHKCEWGTWSLVQASQTGAE MMLEEFPGVRHVYLASGSCLPLRQVDELRAYLAARPMTDFIESVTIRDVDWTVDGLNTERFQFRFPFSWKRHRFLFDRYV ELQRSTGFKRKLPDGLQPHLGSQWWCLSRQTLSAILQDPARREFDRYFKLVWIPDESYYQTLVRNYSRNIESRSLTLSKF DFQGKPHVFYDDHLHLLRRSDCFVARKIWPRADRLYRTFLNDDAADARKAEPTPGKIDRVFAKALERRTRGRPGLYMQSR FPNNDWENGKTAAPYSVLHGFNELFLDFEPWLSRRLGTSVHGNIFSPKRVRFAGDADTFAGCLSAAPELRDYNPERFLTS LIWNTRGERQVFMFGPEDNQRPGAFMAADSNAQISVITGAWAVRLFTANRNFGDIRTEAARLQRREVEFVNTLRHVRSRA EIRIWSLAEFLEEPMENLQRILDAMEGAQASRLTEAPKMANLAGLPKFLQNLKNQGMNPFAVGDFPQEGVAPLPAGADNR PYLVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65683; Mature: 65552
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLGFVMMCHTALDRAAEVARHWAERDCPVVIHLDKRVAKERDVWLKRELSDLDNVKFC CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCHHHH KRHKCEWGTWSLVQASQTGAEMMLEEFPGVRHVYLASGSCLPLRQVDELRAYLAARPMTD HHCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHH FIESVTIRDVDWTVDGLNTERFQFRFPFSWKRHRFLFDRYVELQRSTGFKRKLPDGLQPH HHHHCEEEECCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LGSQWWCLSRQTLSAILQDPARREFDRYFKLVWIPDESYYQTLVRNYSRNIESRSLTLSK CCCCEEEHHHHHHHHHHHCHHHHHHHHEEEEEEECCHHHHHHHHHHHHCCCCHHEEEEEE FDFQGKPHVFYDDHLHLLRRSDCFVARKIWPRADRLYRTFLNDDAADARKAEPTPGKIDR ECCCCCCCEEECCHHHHHHHCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH VFAKALERRTRGRPGLYMQSRFPNNDWENGKTAAPYSVLHGFNELFLDFEPWLSRRLGTS HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHCHHHHHCCHHHHHHHHCCCC VHGNIFSPKRVRFAGDADTFAGCLSAAPELRDYNPERFLTSLIWNTRGERQVFMFGPEDN CCCCCCCCCEEEECCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCC QRPGAFMAADSNAQISVITGAWAVRLFTANRNFGDIRTEAARLQRREVEFVNTLRHVRSR CCCCEEEEECCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AEIRIWSLAEFLEEPMENLQRILDAMEGAQASRLTEAPKMANLAGLPKFLQNLKNQGMNP HCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC FAVGDFPQEGVAPLPAGADNRPYLVR CEECCCCCCCCCCCCCCCCCCCEECC >Mature Secondary Structure STLGFVMMCHTALDRAAEVARHWAERDCPVVIHLDKRVAKERDVWLKRELSDLDNVKFC CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCHHHH KRHKCEWGTWSLVQASQTGAEMMLEEFPGVRHVYLASGSCLPLRQVDELRAYLAARPMTD HHCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHH FIESVTIRDVDWTVDGLNTERFQFRFPFSWKRHRFLFDRYVELQRSTGFKRKLPDGLQPH HHHHCEEEECCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LGSQWWCLSRQTLSAILQDPARREFDRYFKLVWIPDESYYQTLVRNYSRNIESRSLTLSK CCCCEEEHHHHHHHHHHHCHHHHHHHHEEEEEEECCHHHHHHHHHHHHCCCCHHEEEEEE FDFQGKPHVFYDDHLHLLRRSDCFVARKIWPRADRLYRTFLNDDAADARKAEPTPGKIDR ECCCCCCCEEECCHHHHHHHCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHH VFAKALERRTRGRPGLYMQSRFPNNDWENGKTAAPYSVLHGFNELFLDFEPWLSRRLGTS HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHCHHHHHCCHHHHHHHHCCCC VHGNIFSPKRVRFAGDADTFAGCLSAAPELRDYNPERFLTSLIWNTRGERQVFMFGPEDN CCCCCCCCCEEEECCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCC QRPGAFMAADSNAQISVITGAWAVRLFTANRNFGDIRTEAARLQRREVEFVNTLRHVRSR CCCCEEEEECCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AEIRIWSLAEFLEEPMENLQRILDAMEGAQASRLTEAPKMANLAGLPKFLQNLKNQGMNP HCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC FAVGDFPQEGVAPLPAGADNRPYLVR CEECCCCCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA