| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052615
Identifier: 89052615
GI number: 89052615
Start: 114305
End: 115162
Strand: Direct
Name: 89052615
Synonym: Jann_0124
Alternate gene names: NA
Gene position: 114305-115162 (Clockwise)
Preceding gene: 89052614
Following gene: 89052616
Centisome position: 2.65
GC content: 60.72
Gene sequence:
>858_bases GTGTTCACCAGATTGGTAGGCGCGCTCGTGCGGGCGATCATGATCGTCGTCGTCATTTTGACGCCGTCCCTGCTGATCCC GGGGACCAGCTCTGAAAGCGCCAAGATGATCATGCTTGTGGCGCTGGCATTCGCCATGGTCGCGGTGTTTGAATACGGCG CGAAATTCCCCGGACTGATCGAATTTCGGGACGCACCGCCCTTCAACCGCCTGCGCGTGATTGCCCTGTTCCTGACCCTC TTTGGCCTCAGCGTGATCAGCCGCAGCGGCCATGATGGCTCTACCCTGACGATTGTGGTCACGGCGTTGGGCTTTCTCGT CGGCCAGGCCCTCGACTTTCCCTACAGCCCCCTGCGTCTTGTGGTGGATCAACTGCCGCAGGGCATTGATAGCCAGGTGG CCGGGCAGCTTCAGGCGATGGCCGGTCTGTCGATGCTGGTCACTCTTTTGTCGCTGTTCCTGTTCTCGGCCCTCGTCCGG TTGGAGCATTGGCCGAATCGCGGATCCGCCTTCAACGTCTGGATCAATCTGCCCACATTTGACCCCACAGCGGGCGGAGA TGTTGTAAAGCGGTTAAACCGGGATGGGCGCGTTAACGTTATCTTTGGCATTTTCGCGCCATTTGTCATCCCGGCGGTCC TCGTGATGGGAGCCAATCAATTGCAGGTGCCAATCTTCGAGGCACCCCAAACCATGGTATGGGCGGTGACGATATGGATG TTCCTCCCCCTCAGCCTGATCATGCGGGGCCTGGCGATGTTGCGCATCGCCCGCATGATCCGCCTGCGTCGCGCACGGCT TGTGGCCGGCGTCGACGTCGATGGGCCAAGCTCGGCACTGTCCTCCTCAGCGGCCTGA
Upstream 100 bases:
>100_bases TTTAATTCACATGAAATTGGACCATTCGCGCCACGAAGTGGGTCAGCAGACAAAATAAAGGTGTTGGCACGAACTGACAC CATGTTTGAGGTAGATTGCA
Downstream 100 bases:
>100_bases TTGCGGGCACTGCTCAGGCCGATACCCTTCGCCTTGCCACCTATCACACCGGACTGTCGGGCCGTGGACCCGGCGTCATC CTGCGCGATATTCTGCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MFTRLVGALVRAIMIVVVILTPSLLIPGTSSESAKMIMLVALAFAMVAVFEYGAKFPGLIEFRDAPPFNRLRVIALFLTL FGLSVISRSGHDGSTLTIVVTALGFLVGQALDFPYSPLRLVVDQLPQGIDSQVAGQLQAMAGLSMLVTLLSLFLFSALVR LEHWPNRGSAFNVWINLPTFDPTAGGDVVKRLNRDGRVNVIFGIFAPFVIPAVLVMGANQLQVPIFEAPQTMVWAVTIWM FLPLSLIMRGLAMLRIARMIRLRRARLVAGVDVDGPSSALSSSAA
Sequences:
>Translated_285_residues MFTRLVGALVRAIMIVVVILTPSLLIPGTSSESAKMIMLVALAFAMVAVFEYGAKFPGLIEFRDAPPFNRLRVIALFLTL FGLSVISRSGHDGSTLTIVVTALGFLVGQALDFPYSPLRLVVDQLPQGIDSQVAGQLQAMAGLSMLVTLLSLFLFSALVR LEHWPNRGSAFNVWINLPTFDPTAGGDVVKRLNRDGRVNVIFGIFAPFVIPAVLVMGANQLQVPIFEAPQTMVWAVTIWM FLPLSLIMRGLAMLRIARMIRLRRARLVAGVDVDGPSSALSSSAA >Mature_285_residues MFTRLVGALVRAIMIVVVILTPSLLIPGTSSESAKMIMLVALAFAMVAVFEYGAKFPGLIEFRDAPPFNRLRVIALFLTL FGLSVISRSGHDGSTLTIVVTALGFLVGQALDFPYSPLRLVVDQLPQGIDSQVAGQLQAMAGLSMLVTLLSLFLFSALVR LEHWPNRGSAFNVWINLPTFDPTAGGDVVKRLNRDGRVNVIFGIFAPFVIPAVLVMGANQLQVPIFEAPQTMVWAVTIWM FLPLSLIMRGLAMLRIARMIRLRRARLVAGVDVDGPSSALSSSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30864; Mature: 30864
Theoretical pI: Translated: 11.47; Mature: 11.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTRLVGALVRAIMIVVVILTPSLLIPGTSSESAKMIMLVALAFAMVAVFEYGAKFPGLI CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE EFRDAPPFNRLRVIALFLTLFGLSVISRSGHDGSTLTIVVTALGFLVGQALDFPYSPLRL EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH VVDQLPQGIDSQVAGQLQAMAGLSMLVTLLSLFLFSALVRLEHWPNRGSAFNVWINLPTF HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC DPTAGGDVVKRLNRDGRVNVIFGIFAPFVIPAVLVMGANQLQVPIFEAPQTMVWAVTIWM CCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHH FLPLSLIMRGLAMLRIARMIRLRRARLVAGVDVDGPSSALSSSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC >Mature Secondary Structure MFTRLVGALVRAIMIVVVILTPSLLIPGTSSESAKMIMLVALAFAMVAVFEYGAKFPGLI CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE EFRDAPPFNRLRVIALFLTLFGLSVISRSGHDGSTLTIVVTALGFLVGQALDFPYSPLRL EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH VVDQLPQGIDSQVAGQLQAMAGLSMLVTLLSLFLFSALVRLEHWPNRGSAFNVWINLPTF HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC DPTAGGDVVKRLNRDGRVNVIFGIFAPFVIPAVLVMGANQLQVPIFEAPQTMVWAVTIWM CCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHH FLPLSLIMRGLAMLRIARMIRLRRARLVAGVDVDGPSSALSSSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA