Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052616

Identifier: 89052616

GI number: 89052616

Start: 115261

End: 116100

Strand: Direct

Name: 89052616

Synonym: Jann_0125

Alternate gene names: NA

Gene position: 115261-116100 (Clockwise)

Preceding gene: 89052615

Following gene: 89052618

Centisome position: 2.67

GC content: 65.24

Gene sequence:

>840_bases
ATGGAGGATGAGGTTGCCGCGACCGTTGCGGTGATTGAAGCGGCCAATCCCGATATCCTCGCCCTGCAAGACATGGATTA
TGACGGCAACCAGGTGGCGTTGGCCGCGCTGGCTGAGGCGTTGGGATATGCCCACTACACGACCCTTCGCCCCAATACCG
GGCGGCTTACCGGCGTTGATCTGGATGGAGACGGGCGGACAGATGGTCCCCGCGATGCGCATGGCTATGGGCGCTTCAAT
GGCGAAGGCGGCATGGCGTTGCTGTCGCGTTTCCCTTTGGGCGACGTGCAGGACTTCTCAGACATGCTCTGGCGCGACCT
GCCCGGAACGGCGGCGGCGGGTGTGACGCCAGAGGCTGCGCTGCCGGTCCTGCGGCTGCACACAGTGGGGGCCTGGGATG
TGGAAGTCGTGACGCCCGATGGCTCGCTTCACATCCTCATGTCCCACGCCACAACCCCCGTTTTCGATGGGCCTGAGGAT
CGCAACGGCCTGCGCAACGCGGATGAGGTGCGGTTCTGGAGCCTTTACCTTGATGACACGCCCCCTGCGCATTTCGCCTA
TATGGGCACCCTCAACGTTGACCCGCAGCGGGGCGAGGGTCTCCGCGATCCGCTGGTCGAGCTGCTCTCCCATCCAACCC
TGCAAGACCCTGTGCCAGGCGGCCCCACCGCCGATTGGGACGACCCGACGCCCGGCGATCTCCGCGTCGATTATCTTCTG
CCCTCGCGGAGCCTGACCGTGCGGGATGCCGGCGTGCTGTGGCCGACGGAGGGGGAGCTTGCCGAGGCGGTCGAACAGGC
CTCCGACCACCGTCTCGTCTGGGTGGATGTGAATTTCTAG

Upstream 100 bases:

>100_bases
GATTGCGGGCACTGCTCAGGCCGATACCCTTCGCCTTGCCACCTATCACACCGGACTGTCGGGCCGTGGACCCGGCGTCA
TCCTGCGCGATATTCTGCGG

Downstream 100 bases:

>100_bases
ATCAGCGGTGTCACGGCCCGACGCAAGGCATCTTCCAGCGGCGTCGGCCTGTATCCCTTGATCCGCGCCTGCAATGCGCT
GCCATCCACACCGTGCGGCC

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Phytase; Succinyl-CoA Synthetase Alpha Subunit; PKD Domain Containing Protein; Orphan Protein; PKD Domain Protein

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MEDEVAATVAVIEAANPDILALQDMDYDGNQVALAALAEALGYAHYTTLRPNTGRLTGVDLDGDGRTDGPRDAHGYGRFN
GEGGMALLSRFPLGDVQDFSDMLWRDLPGTAAAGVTPEAALPVLRLHTVGAWDVEVVTPDGSLHILMSHATTPVFDGPED
RNGLRNADEVRFWSLYLDDTPPAHFAYMGTLNVDPQRGEGLRDPLVELLSHPTLQDPVPGGPTADWDDPTPGDLRVDYLL
PSRSLTVRDAGVLWPTEGELAEAVEQASDHRLVWVDVNF

Sequences:

>Translated_279_residues
MEDEVAATVAVIEAANPDILALQDMDYDGNQVALAALAEALGYAHYTTLRPNTGRLTGVDLDGDGRTDGPRDAHGYGRFN
GEGGMALLSRFPLGDVQDFSDMLWRDLPGTAAAGVTPEAALPVLRLHTVGAWDVEVVTPDGSLHILMSHATTPVFDGPED
RNGLRNADEVRFWSLYLDDTPPAHFAYMGTLNVDPQRGEGLRDPLVELLSHPTLQDPVPGGPTADWDDPTPGDLRVDYLL
PSRSLTVRDAGVLWPTEGELAEAVEQASDHRLVWVDVNF
>Mature_279_residues
MEDEVAATVAVIEAANPDILALQDMDYDGNQVALAALAEALGYAHYTTLRPNTGRLTGVDLDGDGRTDGPRDAHGYGRFN
GEGGMALLSRFPLGDVQDFSDMLWRDLPGTAAAGVTPEAALPVLRLHTVGAWDVEVVTPDGSLHILMSHATTPVFDGPED
RNGLRNADEVRFWSLYLDDTPPAHFAYMGTLNVDPQRGEGLRDPLVELLSHPTLQDPVPGGPTADWDDPTPGDLRVDYLL
PSRSLTVRDAGVLWPTEGELAEAVEQASDHRLVWVDVNF

Specific function: Unknown

COG id: COG4222

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30158; Mature: 30158

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDEVAATVAVIEAANPDILALQDMDYDGNQVALAALAEALGYAHYTTLRPNTGRLTGVD
CCCHHEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHCHHEEEEECCCCCCEEEEE
LDGDGRTDGPRDAHGYGRFNGEGGMALLSRFPLGDVQDFSDMLWRDLPGTAAAGVTPEAA
ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHH
LPVLRLHTVGAWDVEVVTPDGSLHILMSHATTPVFDGPEDRNGLRNADEVRFWSLYLDDT
CCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
PPAHFAYMGTLNVDPQRGEGLRDPLVELLSHPTLQDPVPGGPTADWDDPTPGDLRVDYLL
CCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
PSRSLTVRDAGVLWPTEGELAEAVEQASDHRLVWVDVNF
CCCCEEEECCCEECCCCCHHHHHHHHCCCCEEEEEEECC
>Mature Secondary Structure
MEDEVAATVAVIEAANPDILALQDMDYDGNQVALAALAEALGYAHYTTLRPNTGRLTGVD
CCCHHEEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHCHHEEEEECCCCCCEEEEE
LDGDGRTDGPRDAHGYGRFNGEGGMALLSRFPLGDVQDFSDMLWRDLPGTAAAGVTPEAA
ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHH
LPVLRLHTVGAWDVEVVTPDGSLHILMSHATTPVFDGPEDRNGLRNADEVRFWSLYLDDT
CCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
PPAHFAYMGTLNVDPQRGEGLRDPLVELLSHPTLQDPVPGGPTADWDDPTPGDLRVDYLL
CCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
PSRSLTVRDAGVLWPTEGELAEAVEQASDHRLVWVDVNF
CCCCEEEECCCEECCCCCHHHHHHHHCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA