Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052549

Identifier: 89052549

GI number: 89052549

Start: 53043

End: 53549

Strand: Reverse

Name: 89052549

Synonym: Jann_0058

Alternate gene names: NA

Gene position: 53549-53043 (Counterclockwise)

Preceding gene: 89052550

Following gene: 89052548

Centisome position: 1.24

GC content: 58.97

Gene sequence:

>507_bases
ATGAAATACGCGCTCCTTGCAAGTCTCCTGGCCGCCATGCCTGCCCATGCGGCGCAATTCCAGTTCTGCTGGGTTGGCGC
AAACGGGTATACGATGGAAGGCCGGATCACGTTCCCCGATGCTTTGCTCGACACCGGTCTGATCACTGAGGCGGACGTGA
CCGGGTTTCAGATCATTGGACTGATTGACGGCGTCGCTATCGGATCATGGAATATGGCGAGCGCCACGGCACAGACCTCC
TGGACCCTGCGCTTTGACACGAACGCGTTGAGGTTCCCCACGGGCGGCCTCAGGTCCGAGAATTCGTATCAGGAATGGAA
CGCCAACGGACAGGTTAATGATTGCGGGGCCGAGGGCGGCTTTGGCTGGAACGGCGGCAATTATGCGCAGGACGTCTGCA
TTGATAACACCTGGATTGAAGACAGCTCGATCGACCCCGACACACCGCTGTTCGCACAACCGATGGATGTCGCGCTCAGG
TGCGAGGCCACGATCCCGATCAGTTGA

Upstream 100 bases:

>100_bases
ATGGCGCGCGCAGCCTGCCCTTTCCGGGCGCGCGCTCCGTGGTCAATTGGCCGGCGTGTCATTGGTTGACGTCTCGTGCC
GCAAGCCCCACTTTCTGCCC

Downstream 100 bases:

>100_bases
GACATGGCACTCGAACGCGCGTGCAGGTATGGCGTGTGTCAGATATGCGTCGAAGAGGATCCGCCAGTGGAACACCCCGT
AGATTTAGCTGCCTGGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MKYALLASLLAAMPAHAAQFQFCWVGANGYTMEGRITFPDALLDTGLITEADVTGFQIIGLIDGVAIGSWNMASATAQTS
WTLRFDTNALRFPTGGLRSENSYQEWNANGQVNDCGAEGGFGWNGGNYAQDVCIDNTWIEDSSIDPDTPLFAQPMDVALR
CEATIPIS

Sequences:

>Translated_168_residues
MKYALLASLLAAMPAHAAQFQFCWVGANGYTMEGRITFPDALLDTGLITEADVTGFQIIGLIDGVAIGSWNMASATAQTS
WTLRFDTNALRFPTGGLRSENSYQEWNANGQVNDCGAEGGFGWNGGNYAQDVCIDNTWIEDSSIDPDTPLFAQPMDVALR
CEATIPIS
>Mature_168_residues
MKYALLASLLAAMPAHAAQFQFCWVGANGYTMEGRITFPDALLDTGLITEADVTGFQIIGLIDGVAIGSWNMASATAQTS
WTLRFDTNALRFPTGGLRSENSYQEWNANGQVNDCGAEGGFGWNGGNYAQDVCIDNTWIEDSSIDPDTPLFAQPMDVALR
CEATIPIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18082; Mature: 18082

Theoretical pI: Translated: 3.78; Mature: 3.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYALLASLLAAMPAHAAQFQFCWVGANGYTMEGRITFPDALLDTGLITEADVTGFQIIG
CCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECEEECCHHHHCCCCEEECCCCCEEEEE
LIDGVAIGSWNMASATAQTSWTLRFDTNALRFPTGGLRSENSYQEWNANGQVNDCGAEGG
EECCEEECCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCHHCCCCCCEECCCCCCC
FGWNGGNYAQDVCIDNTWIEDSSIDPDTPLFAQPMDVALRCEATIPIS
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCEECCCCEEEEEEEECCCC
>Mature Secondary Structure
MKYALLASLLAAMPAHAAQFQFCWVGANGYTMEGRITFPDALLDTGLITEADVTGFQIIG
CCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECEEECCHHHHCCCCEEECCCCCEEEEE
LIDGVAIGSWNMASATAQTSWTLRFDTNALRFPTGGLRSENSYQEWNANGQVNDCGAEGG
EECCEEECCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCHHCCCCCCEECCCCCCC
FGWNGGNYAQDVCIDNTWIEDSSIDPDTPLFAQPMDVALRCEATIPIS
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCEECCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA