| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is cat86 [H]
Identifier: 89052548
GI number: 89052548
Start: 52350
End: 53039
Strand: Reverse
Name: cat86 [H]
Synonym: Jann_0057
Alternate gene names: 89052548
Gene position: 53039-52350 (Counterclockwise)
Preceding gene: 89052549
Following gene: 89052546
Centisome position: 1.23
GC content: 58.84
Gene sequence:
>690_bases ATGGCACTCGAACGCGCGTGCAGGTATGGCGTGTGTCAGATATGCGTCGAAGAGGATCCGCCAGTGGAACACCCCGTAGA TTTAGCTGCCTGGCCCCGTGCGGCGCAGTTCTATTTTTTCCGGACCTTCGACCGCCCACATTTTGCAGTGACTTCCCGCA TCGACGTGACTGACCTGATGGAGCGGCTGAAGCCTCAAGGCATGTCTCCTTACCGTGCAAGTCTTTATGCGATCGGTGCG GGCATCCATGCGGTGCCCGAACTGTTGATGCGGTTTAGGGGCGACACGGTCGTGCGCCACGACGCGGTAGAGCTTTCCAT GACCGTCCCCACCAAGGCCGGCAGTTTCAACTATGCCTACGTGCCCTTCGACCCTGATTTCAGTCAGTTCAACCACGTTG CCAACGCCCTGATTCAGGCCGCGTCCGAGATGGTAGCGCTTGCTGCCAATTCCGGCACTCGCGATGACCTTTGTTATATG TCCTGTCTGCCGTGGCTCGACTATTCGTCGATCAACAACGCAATGCCCGGCCCTGAGGATTGCATTCCCCGGGTCAGCTG GGGGAAGATCGTCAAAACCGCAGATGGATGGTCCATGCCGATGACGCTGGAAGTGCATCATGCGCTGGTCGACGGTGCCC ATGTCGGCGCTTATTTCGCGGCGGTTCAAGGGGCGCTGGATGGCCTCTAG
Upstream 100 bases:
>100_bases CTGGATTGAAGACAGCTCGATCGACCCCGACACACCGCTGTTCGCACAACCGATGGATGTCGCGCTCAGGTGCGAGGCCA CGATCCCGATCAGTTGAGAC
Downstream 100 bases:
>100_bases AGGTCGCCTAACCTTCGGCCTCTGCGGCGCTCCAGCCCGCACTCTGCATTTCCCGCAGGCGGCTGGCTGTCCGCTCGAAC TCGAACGCGCCGCTTCCTGA
Product: chloramphenicol acetyltransferase
Products: NA
Alternate protein names: CAT; Cat-86 [H]
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MALERACRYGVCQICVEEDPPVEHPVDLAAWPRAAQFYFFRTFDRPHFAVTSRIDVTDLMERLKPQGMSPYRASLYAIGA GIHAVPELLMRFRGDTVVRHDAVELSMTVPTKAGSFNYAYVPFDPDFSQFNHVANALIQAASEMVALAANSGTRDDLCYM SCLPWLDYSSINNAMPGPEDCIPRVSWGKIVKTADGWSMPMTLEVHHALVDGAHVGAYFAAVQGALDGL
Sequences:
>Translated_229_residues MALERACRYGVCQICVEEDPPVEHPVDLAAWPRAAQFYFFRTFDRPHFAVTSRIDVTDLMERLKPQGMSPYRASLYAIGA GIHAVPELLMRFRGDTVVRHDAVELSMTVPTKAGSFNYAYVPFDPDFSQFNHVANALIQAASEMVALAANSGTRDDLCYM SCLPWLDYSSINNAMPGPEDCIPRVSWGKIVKTADGWSMPMTLEVHHALVDGAHVGAYFAAVQGALDGL >Mature_228_residues ALERACRYGVCQICVEEDPPVEHPVDLAAWPRAAQFYFFRTFDRPHFAVTSRIDVTDLMERLKPQGMSPYRASLYAIGAG IHAVPELLMRFRGDTVVRHDAVELSMTVPTKAGSFNYAYVPFDPDFSQFNHVANALIQAASEMVALAANSGTRDDLCYMS CLPWLDYSSINNAMPGPEDCIPRVSWGKIVKTADGWSMPMTLEVHHALVDGAHVGAYFAAVQGALDGL
Specific function: This enzyme is an effector of chloramphenicol resistance in bacteria [H]
COG id: COG4845
COG function: function code V; Chloramphenicol O-acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chloramphenicol acetyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023213 - InterPro: IPR018372 - InterPro: IPR001707 - ProDom: PD002660 [H]
Pfam domain/function: PF00302 CAT [H]
EC number: =2.3.1.28 [H]
Molecular weight: Translated: 25275; Mature: 25144
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALERACRYGVCQICVEEDPPVEHPVDLAAWPRAAQFYFFRTFDRPHFAVTSRIDVTDLM CCHHHHHHCCCEEEEECCCCCCCCCCCHHCCCCHHEEEEEEECCCCCEEEECCCCHHHHH ERLKPQGMSPYRASLYAIGAGIHAVPELLMRFRGDTVVRHDAVELSMTVPTKAGSFNYAY HHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCEEEE VPFDPDFSQFNHVANALIQAASEMVALAANSGTRDDLCYMSCLPWLDYSSINNAMPGPED ECCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHCCCCHHHHCCCCCCHHH CIPRVSWGKIVKTADGWSMPMTLEVHHALVDGAHVGAYFAAVQGALDGL HCCCCCCHHEEECCCCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALERACRYGVCQICVEEDPPVEHPVDLAAWPRAAQFYFFRTFDRPHFAVTSRIDVTDLM CHHHHHHCCCEEEEECCCCCCCCCCCHHCCCCHHEEEEEEECCCCCEEEECCCCHHHHH ERLKPQGMSPYRASLYAIGAGIHAVPELLMRFRGDTVVRHDAVELSMTVPTKAGSFNYAY HHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCCCCEEEE VPFDPDFSQFNHVANALIQAASEMVALAANSGTRDDLCYMSCLPWLDYSSINNAMPGPED ECCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHCCCCHHHHCCCCCCHHH CIPRVSWGKIVKTADGWSMPMTLEVHHALVDGAHVGAYFAAVQGALDGL HCCCCCCHHEEECCCCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2414270; 6315534 [H]