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The map label for this gene is ocd2 [H]

Identifier: 89052545

GI number: 89052545

Start: 48864

End: 49769

Strand: Direct

Name: ocd2 [H]

Synonym: Jann_0054

Alternate gene names: 89052545

Gene position: 48864-49769 (Clockwise)

Preceding gene: 89052544

Following gene: 89052547

Centisome position: 1.13

GC content: 60.49

Gene sequence:

>906_bases
ATGATGATCATCGGACCTGAGGCAGAAGAGCATCTGGATTGGATCGCGCTGTGCGCCGCCATCGAGGCGGGTCACAAGCT
GCCGCGCGCTGACATAGACGATACGTTTCTTTATCGGGGCAATGATACGCTGCTGAGCCGTGCTGCCTGGATCGACGGGC
TGGGGCAGCTGGTGAAGACCGCCACGATCTTTCCCGGCAACAAGGCCATGCGCAAACCGGCGATCAATGGCGGCGTCTGT
CTGTTCTCGGACACCGATGGAAGTCTTGAGGCGATTATCGATTTCCACCTGCTGACCAAATGGAAGACCGCGGGCGACAG
TCTTCTGGCGGCGCGCAAACTGGCGCGGACCGATGCGACCAATATCCTGCTGGTGGGGTCGGGCAATGTGGCGAAGTCCA
TGCGTCAGGCCTATGCCGCAGCCTTTCCGGATGCGACATTCACGGTGTGGAACAGAACGCTGGCCAATATTGCCTCCATG
CGGGCGGCCTACCCTGATATCGCCATTGCCCACGATCTGCGAGAGGCCGTGGCGAACGCGCATATCATCGCGACCACGAC
CATGGCGACCACACCCGTGGTGCGCGGCAAATGGCTGGAGCCGGGCACCCATCTGGACCTGATAGGCGCCTACCGACCCG
ATATGAGAGAGGTCGACGACGATGCTCTGCGCCGGTCCCGTGTCTTTGTCGACAGCCGCGCGACCACCGTGGGCCATATT
GGAGAGATGAAGATACCGATCGAGGAGGGTGTGTTCTTCGAATCCGATATTGTCGGTGACTTCTACGATATGGGAACGTT
GCAGCGAACCACCGACACGGAGATCACGTTGTGCAAGAATGGCGGCGGGGCGCATCTGGACCTGATGGTGGCGCGCTACA
TCCTTGATGCGGTGCGCGGCGGATAG

Upstream 100 bases:

>100_bases
GGGCCCGAGGGGTTGGCCAAACGGCTGGTGCAAGACGGGCTGTTGAGCGAGAAGGATGCGGGGCTATGACGCTGAATGCT
GAAATGGGGCGTCGCGTCCC

Downstream 100 bases:

>100_bases
AGGTGTTGCGCCGGCTTTGCCGTCGCCGGATGCGAGGGGCTCTGCCCTTCGCGCTCCCCGGAGGTGTAGGGCCAAGATGA
AGGAGCGCGTCAGGCCGGTG

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MMIIGPEAEEHLDWIALCAAIEAGHKLPRADIDDTFLYRGNDTLLSRAAWIDGLGQLVKTATIFPGNKAMRKPAINGGVC
LFSDTDGSLEAIIDFHLLTKWKTAGDSLLAARKLARTDATNILLVGSGNVAKSMRQAYAAAFPDATFTVWNRTLANIASM
RAAYPDIAIAHDLREAVANAHIIATTTMATTPVVRGKWLEPGTHLDLIGAYRPDMREVDDDALRRSRVFVDSRATTVGHI
GEMKIPIEEGVFFESDIVGDFYDMGTLQRTTDTEITLCKNGGGAHLDLMVARYILDAVRGG

Sequences:

>Translated_301_residues
MMIIGPEAEEHLDWIALCAAIEAGHKLPRADIDDTFLYRGNDTLLSRAAWIDGLGQLVKTATIFPGNKAMRKPAINGGVC
LFSDTDGSLEAIIDFHLLTKWKTAGDSLLAARKLARTDATNILLVGSGNVAKSMRQAYAAAFPDATFTVWNRTLANIASM
RAAYPDIAIAHDLREAVANAHIIATTTMATTPVVRGKWLEPGTHLDLIGAYRPDMREVDDDALRRSRVFVDSRATTVGHI
GEMKIPIEEGVFFESDIVGDFYDMGTLQRTTDTEITLCKNGGGAHLDLMVARYILDAVRGG
>Mature_301_residues
MMIIGPEAEEHLDWIALCAAIEAGHKLPRADIDDTFLYRGNDTLLSRAAWIDGLGQLVKTATIFPGNKAMRKPAINGGVC
LFSDTDGSLEAIIDFHLLTKWKTAGDSLLAARKLARTDATNILLVGSGNVAKSMRQAYAAAFPDATFTVWNRTLANIASM
RAAYPDIAIAHDLREAVANAHIIATTTMATTPVVRGKWLEPGTHLDLIGAYRPDMREVDDDALRRSRVFVDSRATTVGHI
GEMKIPIEEGVFFESDIVGDFYDMGTLQRTTDTEITLCKNGGGAHLDLMVARYILDAVRGG

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI62241008, Length=230, Percent_Identity=29.1304347826087, Blast_Score=107, Evalue=9e-24,
Organism=Homo sapiens, GI4503065, Length=230, Percent_Identity=29.1304347826087, Blast_Score=107, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 32731; Mature: 32731

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIIGPEAEEHLDWIALCAAIEAGHKLPRADIDDTFLYRGNDTLLSRAAWIDGLGQLVKT
CEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH
ATIFPGNKAMRKPAINGGVCLFSDTDGSLEAIIDFHLLTKWKTAGDSLLAARKLARTDAT
HCCCCCCHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
NILLVGSGNVAKSMRQAYAAAFPDATFTVWNRTLANIASMRAAYPDIAIAHDLREAVANA
CEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
HIIATTTMATTPVVRGKWLEPGTHLDLIGAYRPDMREVDDDALRRSRVFVDSRATTVGHI
EEEEEECHHCCCCCCCCCCCCCCCEEEEECCCCCHHHCCHHHHHHHHEEEECCCCEEECC
GEMKIPIEEGVFFESDIVGDFYDMGTLQRTTDTEITLCKNGGGAHLDLMVARYILDAVRG
CCEEEEHHHCCEECCCCCCHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
G
C
>Mature Secondary Structure
MMIIGPEAEEHLDWIALCAAIEAGHKLPRADIDDTFLYRGNDTLLSRAAWIDGLGQLVKT
CEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH
ATIFPGNKAMRKPAINGGVCLFSDTDGSLEAIIDFHLLTKWKTAGDSLLAARKLARTDAT
HCCCCCCHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
NILLVGSGNVAKSMRQAYAAAFPDATFTVWNRTLANIASMRAAYPDIAIAHDLREAVANA
CEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
HIIATTTMATTPVVRGKWLEPGTHLDLIGAYRPDMREVDDDALRRSRVFVDSRATTVGHI
EEEEEECHHCCCCCCCCCCCCCCCEEEEECCCCCHHHCCHHHHHHHHEEEECCCCEEECC
GEMKIPIEEGVFFESDIVGDFYDMGTLQRTTDTEITLCKNGGGAHLDLMVARYILDAVRG
CCEEEEHHHCCEECCCCCCHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]