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The map label for this gene is yhcM [H]

Identifier: 89052547

GI number: 89052547

Start: 51266

End: 52342

Strand: Direct

Name: yhcM [H]

Synonym: Jann_0056

Alternate gene names: 89052547

Gene position: 51266-52342 (Clockwise)

Preceding gene: 89052545

Following gene: 89052553

Centisome position: 1.19

GC content: 62.49

Gene sequence:

>1077_bases
ATGACATCCCTCTATGATACGCGCGTCTCGGAAGGGCTTTTGCGGCCGGATCCCGCGCAACGGGCTGTGATGGAGCAGTT
GGAGGAGGTGCGCGCGGCCCTCGTTGCGCCGCAACCCAAGGGCCTTTTGGCACGGTTTCGCAAGGCAGAGCCGCTGGATC
AGCAGGGGCTCTATCTGTGGGGTGGGGTGGGGCGTGGCAAGTCGATGCTGATGGACATGTTTTTCCAGCATACCGGCATC
ACTGGCAAACGGCGCGTTCACTTTCACGCCTTCATGCAGGAGGTTCAGGCCGCGCTGCATGAGGCGCGCAAGACCGGTGT
GGACGATGCGATAAAACCCGTGGCTGAGGATATCGCCCGCGACCTGAAGTTGCTGTGTTTTGATGAGATGCAGATCACCG
ACATCGCCGATGCAATGATCGTGGGGCGACTGTTCGAGCGGTTGTTCGAGGCGGGCGTCATGGTCGTCACGACCTCCAAC
AGGCCGCCGAAGGACCTCTACAAAGATGGGCTGAACCGGCAGCTATTCCTGCCGTTCATCGCCCTTCTGGAAGAGCGGAT
GGACGTGCACAACCTTGATGCACAAACGGATTATCGCCAGGATCGTCTGGCCGGGGAGCCGGTGTGGTTCACCCCCGCAG
ACGCAGATGCCAAGCGCGCGATCGACCTGATCTGGCGCGACCTAACGGGCGGGAAGGATGAGCCGCTGACGCTGGAGGTG
AAGGGCCGCGACGTTGTGATCCCGCGGTTCTGGGCGGGACAGGCACGGGCGTCTTTCGCACAGCTCTGTGGAACCGCTTT
AGGACCGGGGGACTACCTTGCGTTGGTGGATGCCACCAGCGTCCTGGTGCTGGAGGACATTCCACAGATGAGCCCGGTAA
ACGCCAATGAGGCCAAGCGCTTCGTGACCCTGATCGACACGCTCTACGAGGGGGGTGTACGCCTGATCGCCAGCGCCGAG
ACCGAGCCGGAGGACCTGTACGTATCAGGAAGCGGCGCGTTCGAGTTCGAGCGGACAGCCAGCCGCCTGCGGGAAATGCA
GAGTGCGGGCTGGAGCGCCGCAGAGGCCGAAGGTTAG

Upstream 100 bases:

>100_bases
ATCAGACCTTGTGACGGCGCTGATCAATTTCCTGAACACGCTTGTTTTTCATAGGCAAGCCCTTGCGATCCAAGCTAAAC
ATCCGCCCATGCCACAAAGA

Downstream 100 bases:

>100_bases
GCGACCTCTAGAGGCCATCCAGCGCCCCTTGAACCGCCGCGAAATAAGCGCCGACATGGGCACCGTCGACCAGCGCATGA
TGCACTTCCAGCGTCATCGG

Product: AFG1-like ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MTSLYDTRVSEGLLRPDPAQRAVMEQLEEVRAALVAPQPKGLLARFRKAEPLDQQGLYLWGGVGRGKSMLMDMFFQHTGI
TGKRRVHFHAFMQEVQAALHEARKTGVDDAIKPVAEDIARDLKLLCFDEMQITDIADAMIVGRLFERLFEAGVMVVTTSN
RPPKDLYKDGLNRQLFLPFIALLEERMDVHNLDAQTDYRQDRLAGEPVWFTPADADAKRAIDLIWRDLTGGKDEPLTLEV
KGRDVVIPRFWAGQARASFAQLCGTALGPGDYLALVDATSVLVLEDIPQMSPVNANEAKRFVTLIDTLYEGGVRLIASAE
TEPEDLYVSGSGAFEFERTASRLREMQSAGWSAAEAEG

Sequences:

>Translated_358_residues
MTSLYDTRVSEGLLRPDPAQRAVMEQLEEVRAALVAPQPKGLLARFRKAEPLDQQGLYLWGGVGRGKSMLMDMFFQHTGI
TGKRRVHFHAFMQEVQAALHEARKTGVDDAIKPVAEDIARDLKLLCFDEMQITDIADAMIVGRLFERLFEAGVMVVTTSN
RPPKDLYKDGLNRQLFLPFIALLEERMDVHNLDAQTDYRQDRLAGEPVWFTPADADAKRAIDLIWRDLTGGKDEPLTLEV
KGRDVVIPRFWAGQARASFAQLCGTALGPGDYLALVDATSVLVLEDIPQMSPVNANEAKRFVTLIDTLYEGGVRLIASAE
TEPEDLYVSGSGAFEFERTASRLREMQSAGWSAAEAEG
>Mature_357_residues
TSLYDTRVSEGLLRPDPAQRAVMEQLEEVRAALVAPQPKGLLARFRKAEPLDQQGLYLWGGVGRGKSMLMDMFFQHTGIT
GKRRVHFHAFMQEVQAALHEARKTGVDDAIKPVAEDIARDLKLLCFDEMQITDIADAMIVGRLFERLFEAGVMVVTTSNR
PPKDLYKDGLNRQLFLPFIALLEERMDVHNLDAQTDYRQDRLAGEPVWFTPADADAKRAIDLIWRDLTGGKDEPLTLEVK
GRDVVIPRFWAGQARASFAQLCGTALGPGDYLALVDATSVLVLEDIPQMSPVNANEAKRFVTLIDTLYEGGVRLIASAET
EPEDLYVSGSGAFEFERTASRLREMQSAGWSAAEAEG

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=371, Percent_Identity=38.8140161725067, Blast_Score=249, Evalue=2e-66,
Organism=Escherichia coli, GI1789627, Length=367, Percent_Identity=37.3297002724796, Blast_Score=234, Evalue=4e-63,
Organism=Caenorhabditis elegans, GI17505769, Length=413, Percent_Identity=33.1719128329298, Blast_Score=233, Evalue=2e-61,
Organism=Saccharomyces cerevisiae, GI6320783, Length=398, Percent_Identity=31.6582914572864, Blast_Score=181, Evalue=1e-46,
Organism=Drosophila melanogaster, GI20129913, Length=412, Percent_Identity=35.6796116504854, Blast_Score=227, Evalue=9e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 39815; Mature: 39684

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLYDTRVSEGLLRPDPAQRAVMEQLEEVRAALVAPQPKGLLARFRKAEPLDQQGLYLW
CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEE
GGVGRGKSMLMDMFFQHTGITGKRRVHFHAFMQEVQAALHEARKTGVDDAIKPVAEDIAR
ECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
DLKLLCFDEMQITDIADAMIVGRLFERLFEAGVMVVTTSNRPPKDLYKDGLNRQLFLPFI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCCCHHHHHH
ALLEERMDVHNLDAQTDYRQDRLAGEPVWFTPADADAKRAIDLIWRDLTGGKDEPLTLEV
HHHHHHHHHHCCCCCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEE
KGRDVVIPRFWAGQARASFAQLCGTALGPGDYLALVDATSVLVLEDIPQMSPVNANEAKR
CCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHH
FVTLIDTLYEGGVRLIASAETEPEDLYVSGSGAFEFERTASRLREMQSAGWSAAEAEG
HHHHHHHHHHCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TSLYDTRVSEGLLRPDPAQRAVMEQLEEVRAALVAPQPKGLLARFRKAEPLDQQGLYLW
CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEE
GGVGRGKSMLMDMFFQHTGITGKRRVHFHAFMQEVQAALHEARKTGVDDAIKPVAEDIAR
ECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
DLKLLCFDEMQITDIADAMIVGRLFERLFEAGVMVVTTSNRPPKDLYKDGLNRQLFLPFI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCCCHHHHHH
ALLEERMDVHNLDAQTDYRQDRLAGEPVWFTPADADAKRAIDLIWRDLTGGKDEPLTLEV
HHHHHHHHHHCCCCCCHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEE
KGRDVVIPRFWAGQARASFAQLCGTALGPGDYLALVDATSVLVLEDIPQMSPVNANEAKR
CCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCCCHHHHHH
FVTLIDTLYEGGVRLIASAETEPEDLYVSGSGAFEFERTASRLREMQSAGWSAAEAEG
HHHHHHHHHHCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]