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The map label for this gene is yraP [C]

Identifier: 88658506

GI number: 88658506

Start: 324791

End: 325399

Strand: Direct

Name: yraP [C]

Synonym: ECH_0335

Alternate gene names: 88658506

Gene position: 324791-325399 (Clockwise)

Preceding gene: 88657832

Following gene: 88658015

Centisome position: 27.61

GC content: 32.35

Gene sequence:

>609_bases
ATGCTTTTACTGTTCCATATGCGTTTTCTAGTAAATTTTTTGTTGCTAATTTTTTTAATTATAAGCCAGTCTGGTTGTTC
AGGGATAATGGCTGGGCTTGCTGTTACTACAGGTGCAATTATTACATTACAAGATAAATCAGTTGGTGATACTATAGATG
ATACAGCAATATTGATTAGAATTAATAAAGAGCTATTTAAGGCAGGGTTATTTCCTCAGGTAACTGTTAAGGTTAGTGAA
GGGCGTATATTATTGATAGGACACGTGAAATCATTGGATGATCAAATAAAAGCTGAAAAAGTTGCATGGCAGCAGAAGGA
TGTAAGAGAAGTGGTGAATGAAATAACTGTAGATAAAAATGCAATTAATATAAAAGAAACAGCTGTTGATACTATGATTA
GTGCTCAGGTAAAAGCACGGATCCTTTCTCAAAGTAAAGTTAAGTCTATGAATTATAGTGTTAATACAATAAATGGGACT
GTTTATTTAATGGGTATAGCTCAAGATCAGGAGGAGTTGGATAAGGTTGTATCAATAGCGCAAAAAGTCAAAAAAGTAAA
ACAAGTTATTAGTTATGTAAGATTAAAGGATAGCAAGTTACGTGATTAA

Upstream 100 bases:

>100_bases
TAATTACTAAAGTGTTAAAGTATACTATATTTTAAAAAGGTATAAAATATTTTACTATTTACACACTATAAAAAGTTGTA
TAGCATAACCCTGTCGCTTT

Downstream 100 bases:

>100_bases
TCATCTACTTCAATTTTATATACGCTGTTTTTTACAATAAGTAATTTTACATTACTGTAGGACTATAAATAAATGTGTGA
ATTACATACGTATGACATAT

Product: putative osmotically inducible protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MLLLFHMRFLVNFLLLIFLIISQSGCSGIMAGLAVTTGAIITLQDKSVGDTIDDTAILIRINKELFKAGLFPQVTVKVSE
GRILLIGHVKSLDDQIKAEKVAWQQKDVREVVNEITVDKNAINIKETAVDTMISAQVKARILSQSKVKSMNYSVNTINGT
VYLMGIAQDQEELDKVVSIAQKVKKVKQVISYVRLKDSKLRD

Sequences:

>Translated_202_residues
MLLLFHMRFLVNFLLLIFLIISQSGCSGIMAGLAVTTGAIITLQDKSVGDTIDDTAILIRINKELFKAGLFPQVTVKVSE
GRILLIGHVKSLDDQIKAEKVAWQQKDVREVVNEITVDKNAINIKETAVDTMISAQVKARILSQSKVKSMNYSVNTINGT
VYLMGIAQDQEELDKVVSIAQKVKKVKQVISYVRLKDSKLRD
>Mature_202_residues
MLLLFHMRFLVNFLLLIFLIISQSGCSGIMAGLAVTTGAIITLQDKSVGDTIDDTAILIRINKELFKAGLFPQVTVKVSE
GRILLIGHVKSLDDQIKAEKVAWQQKDVREVVNEITVDKNAINIKETAVDTMISAQVKARILSQSKVKSMNYSVNTINGT
VYLMGIAQDQEELDKVVSIAQKVKKVKQVISYVRLKDSKLRD

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=188, Percent_Identity=29.2553191489362, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 22447; Mature: 22447

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLFHMRFLVNFLLLIFLIISQSGCSGIMAGLAVTTGAIITLQDKSVGDTIDDTAILIR
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEE
INKELFKAGLFPQVTVKVSEGRILLIGHVKSLDDQIKAEKVAWQQKDVREVVNEITVDKN
ECHHHHHCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AINIKETAVDTMISAQVKARILSQSKVKSMNYSVNTINGTVYLMGIAQDQEELDKVVSIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCHHHHHHHHHHH
QKVKKVKQVISYVRLKDSKLRD
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLLLFHMRFLVNFLLLIFLIISQSGCSGIMAGLAVTTGAIITLQDKSVGDTIDDTAILIR
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEE
INKELFKAGLFPQVTVKVSEGRILLIGHVKSLDDQIKAEKVAWQQKDVREVVNEITVDKN
ECHHHHHCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AINIKETAVDTMISAQVKARILSQSKVKSMNYSVNTINGTVYLMGIAQDQEELDKVVSIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCHHHHHHHHHHH
QKVKKVKQVISYVRLKDSKLRD
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1540152 [H]