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The map label for this gene is 88657746

Identifier: 88657746

GI number: 88657746

Start: 1102226

End: 1102774

Strand: Direct

Name: 88657746

Synonym: ECH_1072

Alternate gene names: NA

Gene position: 1102226-1102774 (Clockwise)

Preceding gene: 88658234

Following gene: 88658660

Centisome position: 93.71

GC content: 28.96

Gene sequence:

>549_bases
ATGCAATTAAGGTTATTTTTAGCTATTTTTATATTACTATTCGGTTTAAGTTGCCAAGCTTCGGCAAAAAATGATCAGAA
CATCCCTGTAGCCTTCATTGATCGTGATCTAATTATATCTGAAGCACTCGCAGTAAAAAGCATTAGAACACAATTAGACA
ACAAAAGAGAAGAACTACAGAAAGATTTTTCAGCAAGAGAAGAAGAGTTGCATAAAATCGAAGAAGATTTAAGTAAGCAA
AAAGCTATCTTAAGTTCTGAAGCTTTTGAAAAGAAAGTTGCAGATTTTAAAATAAAGGTATCAAATCTACAACAAGATAT
TTCTGTAAAAGGATCAGAATTAGAAAATATGTATATGAACGCTATGGAGATGGTTTACAATAAGATTAAAAACATCTCAG
CTAAAATAGCAAAGGAAAGAAGCATTAGCTTAGTTTTATTCTTAATGAAGAAAAATCAAGTATTTTACGCTGCTGATAAT
ATAGATTTTTCTAACGAAGTATTAGAAATGTTAAACAAAGAATTACCAAATATAGAAATAAAGAAGTGA

Upstream 100 bases:

>100_bases
TGGACCAATGAGATTAGATTTTGGCTTCCCTATACTAAAAAAAGACTATGATGTTACAGACATGATAAGATTTTCAATGC
AATAGAAAAAAGAGGTATTT

Downstream 100 bases:

>100_bases
GATATTAATTAGAGATTTGTATGCAGTTCAATATTCAAGAAATCATAAAAATGATACCACATTCGTATCCATTTTTGTTA
ATTGATAGAGTAACTGCATG

Product: OmpH family outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein OmpH; OmpH Family Outer Membrane Protein

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MQLRLFLAIFILLFGLSCQASAKNDQNIPVAFIDRDLIISEALAVKSIRTQLDNKREELQKDFSAREEELHKIEEDLSKQ
KAILSSEAFEKKVADFKIKVSNLQQDISVKGSELENMYMNAMEMVYNKIKNISAKIAKERSISLVLFLMKKNQVFYAADN
IDFSNEVLEMLNKELPNIEIKK

Sequences:

>Translated_182_residues
MQLRLFLAIFILLFGLSCQASAKNDQNIPVAFIDRDLIISEALAVKSIRTQLDNKREELQKDFSAREEELHKIEEDLSKQ
KAILSSEAFEKKVADFKIKVSNLQQDISVKGSELENMYMNAMEMVYNKIKNISAKIAKERSISLVLFLMKKNQVFYAADN
IDFSNEVLEMLNKELPNIEIKK
>Mature_182_residues
MQLRLFLAIFILLFGLSCQASAKNDQNIPVAFIDRDLIISEALAVKSIRTQLDNKREELQKDFSAREEELHKIEEDLSKQ
KAILSSEAFEKKVADFKIKVSNLQQDISVKGSELENMYMNAMEMVYNKIKNISAKIAKERSISLVLFLMKKNQVFYAADN
IDFSNEVLEMLNKELPNIEIKK

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20966; Mature: 20966

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLRLFLAIFILLFGLSCQASAKNDQNIPVAFIDRDLIISEALAVKSIRTQLDNKREELQ
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
KDFSAREEELHKIEEDLSKQKAILSSEAFEKKVADFKIKVSNLQQDISVKGSELENMYMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AMEMVYNKIKNISAKIAKERSISLVLFLMKKNQVFYAADNIDFSNEVLEMLNKELPNIEI
HHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCEEEEEECCCCCHHHHHHHHHHHCCCCCC
KK
CC
>Mature Secondary Structure
MQLRLFLAIFILLFGLSCQASAKNDQNIPVAFIDRDLIISEALAVKSIRTQLDNKREELQ
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
KDFSAREEELHKIEEDLSKQKAILSSEAFEKKVADFKIKVSNLQQDISVKGSELENMYMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AMEMVYNKIKNISAKIAKERSISLVLFLMKKNQVFYAADNIDFSNEVLEMLNKELPNIEI
HHHHHHHHHHHHHHHHHHHCCHHEEEEEEECCEEEEEECCCCCHHHHHHHHHHHCCCCCC
KK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA