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The map label for this gene is ftsY [H]

Identifier: 88657689

GI number: 88657689

Start: 1134773

End: 1135705

Strand: Direct

Name: ftsY [H]

Synonym: ECH_1111

Alternate gene names: 88657689

Gene position: 1134773-1135705 (Clockwise)

Preceding gene: 88658583

Following gene: 88658434

Centisome position: 96.47

GC content: 33.55

Gene sequence:

>933_bases
ATGACAGATGCAACTAATAAAGGATTTTTCAGCAATATCAAGAAAGGTTTATTTAAAACCTCATCAAAGTTAAGTGACGG
TATAAAGAAAATTTTTTCTAGTGGAAAAAAAGTTGACCAAGAAACTTTAGAAGAATTGAAAGAATTACTCATCACAGCAG
ATGTAGGCTATGACAATGCTTCACTACTTACACAAAAACTTGCATCCACAAAGTTTAATGAAATGGATGATAATACAGTA
AAGCAAAAACTCGCTGAATCTATAGAAAACATCCTATTACAAGTTGAAAAGCCTCTCTCTATAAACAATAAGCCACATGT
AATTATGGTATGTGGTACAAATGGAAATGGCAAGACCACAACTATAGGTAAATTAGCACATAGGTTTAAAAACACAGGGA
AAAAAGTACTAGTTGCAGCATGTGACACATTTCGTGCAGCAGCTACTGAACAACTAATAGTATGGTCACAAAAAGTAAAT
TTCCCAGTAGTAACAGGCAATCAGGGAGCAGATGCAGCAAGTATAGCATATCAAGCAATGCAACAAGCCTTAAATGAACA
AACCGATGTCTTGCTAATTGATACAGCTGGAAGATTACATAATCATAAAAACTTGATGGAAGAACTAGCAAAAATTAGAA
GAATTATAAACAAACATGACAACAATGCACCTCATGATGTCATACTAATATTAGACGCAACAACTGGACAAAACGCTGTC
AATCAAGTTGATGCTTTTTTACAATTCGTCAATATTAGTGGATTAATTATAACTAAGTTAGACGGCACAGCAAAAGGAGG
AGTAGTTATAAGAATAGCACAAAAATATAAATTGAACATTCATGCAATAGGTATTGGTGAATCTGTAGAACAACTTCAAG
ACTTTTCTGCCAAAGAATTTGCTGCAGGATTACTCGACATAAACACCATATAA

Upstream 100 bases:

>100_bases
AATAAGCTGACATTTACACAACAACCAATATAATTTAACAAACGTATCCTAACTGATACAAACCCAGTTCACAATATTTT
AGAAACAAGGGCAATTCAAT

Downstream 100 bases:

>100_bases
TTGTAGTCACTTAATAAACTGTCTAATATTCAGCCATATCAGCAGAGTAGTCATAAGAATAGCACAAATATAAATTGAAC
TCATGTATAGGTATATTGAT

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTDATNKGFFSNIKKGLFKTSSKLSDGIKKIFSSGKKVDQETLEELKELLITADVGYDNASLLTQKLASTKFNEMDDNTV
KQKLAESIENILLQVEKPLSINNKPHVIMVCGTNGNGKTTTIGKLAHRFKNTGKKVLVAACDTFRAAATEQLIVWSQKVN
FPVVTGNQGADAASIAYQAMQQALNEQTDVLLIDTAGRLHNHKNLMEELAKIRRIINKHDNNAPHDVILILDATTGQNAV
NQVDAFLQFVNISGLIITKLDGTAKGGVVIRIAQKYKLNIHAIGIGESVEQLQDFSAKEFAAGLLDINTI

Sequences:

>Translated_310_residues
MTDATNKGFFSNIKKGLFKTSSKLSDGIKKIFSSGKKVDQETLEELKELLITADVGYDNASLLTQKLASTKFNEMDDNTV
KQKLAESIENILLQVEKPLSINNKPHVIMVCGTNGNGKTTTIGKLAHRFKNTGKKVLVAACDTFRAAATEQLIVWSQKVN
FPVVTGNQGADAASIAYQAMQQALNEQTDVLLIDTAGRLHNHKNLMEELAKIRRIINKHDNNAPHDVILILDATTGQNAV
NQVDAFLQFVNISGLIITKLDGTAKGGVVIRIAQKYKLNIHAIGIGESVEQLQDFSAKEFAAGLLDINTI
>Mature_309_residues
TDATNKGFFSNIKKGLFKTSSKLSDGIKKIFSSGKKVDQETLEELKELLITADVGYDNASLLTQKLASTKFNEMDDNTVK
QKLAESIENILLQVEKPLSINNKPHVIMVCGTNGNGKTTTIGKLAHRFKNTGKKVLVAACDTFRAAATEQLIVWSQKVNF
PVVTGNQGADAASIAYQAMQQALNEQTDVLLIDTAGRLHNHKNLMEELAKIRRIINKHDNNAPHDVILILDATTGQNAVN
QVDAFLQFVNISGLIITKLDGTAKGGVVIRIAQKYKLNIHAIGIGESVEQLQDFSAKEFAAGLLDINTI

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=275, Percent_Identity=30.1818181818182, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI226371618, Length=254, Percent_Identity=30.3149606299213, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI23308697, Length=306, Percent_Identity=30.3921568627451, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI295424842, Length=306, Percent_Identity=30.3921568627451, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI89061728, Length=140, Percent_Identity=30.7142857142857, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI1789874, Length=305, Percent_Identity=45.9016393442623, Blast_Score=256, Evalue=1e-69,
Organism=Escherichia coli, GI1788963, Length=301, Percent_Identity=29.2358803986711, Blast_Score=129, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17539958, Length=235, Percent_Identity=29.7872340425532, Blast_Score=117, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI193206261, Length=296, Percent_Identity=28.3783783783784, Blast_Score=99, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6325345, Length=207, Percent_Identity=34.7826086956522, Blast_Score=125, Evalue=1e-29,
Organism=Saccharomyces cerevisiae, GI6320498, Length=305, Percent_Identity=29.5081967213115, Blast_Score=100, Evalue=4e-22,
Organism=Drosophila melanogaster, GI17647949, Length=275, Percent_Identity=31.2727272727273, Blast_Score=121, Evalue=6e-28,
Organism=Drosophila melanogaster, GI24641198, Length=260, Percent_Identity=30.7692307692308, Blast_Score=108, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 33815; Mature: 33684

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDATNKGFFSNIKKGLFKTSSKLSDGIKKIFSSGKKVDQETLEELKELLITADVGYDNA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCCHH
SLLTQKLASTKFNEMDDNTVKQKLAESIENILLQVEKPLSINNKPHVIMVCGTNGNGKTT
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCH
TIGKLAHRFKNTGKKVLVAACDTFRAAATEQLIVWSQKVNFPVVTGNQGADAASIAYQAM
HHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHEEEEECCCCEEEECCCCCCHHHHHHHHH
QQALNEQTDVLLIDTAGRLHNHKNLMEELAKIRRIINKHDNNAPHDVILILDATTGQNAV
HHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHH
NQVDAFLQFVNISGLIITKLDGTAKGGVVIRIAQKYKLNIHAIGIGESVEQLQDFSAKEF
HHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEEEEEEEEECCHHHHHHHCCCHHHH
AAGLLDINTI
HHHHHEECCC
>Mature Secondary Structure 
TDATNKGFFSNIKKGLFKTSSKLSDGIKKIFSSGKKVDQETLEELKELLITADVGYDNA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCCHH
SLLTQKLASTKFNEMDDNTVKQKLAESIENILLQVEKPLSINNKPHVIMVCGTNGNGKTT
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCH
TIGKLAHRFKNTGKKVLVAACDTFRAAATEQLIVWSQKVNFPVVTGNQGADAASIAYQAM
HHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHEEEEECCCCEEEECCCCCCHHHHHHHHH
QQALNEQTDVLLIDTAGRLHNHKNLMEELAKIRRIINKHDNNAPHDVILILDATTGQNAV
HHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHH
NQVDAFLQFVNISGLIITKLDGTAKGGVVIRIAQKYKLNIHAIGIGESVEQLQDFSAKEF
HHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEEEEEEEEEEECCHHHHHHHCCCHHHH
AAGLLDINTI
HHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA