| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
Click here to switch to the map view.
The map label for this gene is 88658583
Identifier: 88658583
GI number: 88658583
Start: 1125915
End: 1126586
Strand: Direct
Name: 88658583
Synonym: ECH_1103
Alternate gene names: NA
Gene position: 1125915-1126586 (Clockwise)
Preceding gene: 88657977
Following gene: 88657689
Centisome position: 95.72
GC content: 27.23
Gene sequence:
>672_bases GTGATATCAAATATTATTATTAGTGATAACAGTAGTATAACAATATTTTTCACGGGAAAAGATGAAATAGAAAAATTCAC TAAAATATTCACTGTATTAGATAAAAACAAAGCTGCTAAAGCCCTGTTCAATCATGAAGTTAATATAGAATATCAAGATA ACCGTGCAATATTGACATCTTCTACAAACTTTGAATTCAGTGATCTTAACAAGATAATAACACACATGTTACAACATGAT TTTATAATTAACACAAATACCATAGAGCAATCTCTAGAACAAGGATGTAATACCTTAAAAACTGATAACTTAGTTATTTG TAGGTTTAATGATAAGCCACTATACAGTATTAATATCAGTATTAGGAACAACACAATTATATTACATCCTATATCCACAA AATATTTAGACCTATCTTCAGAGTACAATCAAAAACTAATGAGCTTACTCAAAACACATACTAGCACTAGCGATATTACC ATAGATAATAAACAAAATAGTATTTTACTATCGATCAACACTGCAATATATGACATAATACAGTCACTTGTAAGCACATT AATAAAAGCACAAATTACCGAAGAAAGTGATAAAGAAAAAATTTTACAACAGTTGACTAAACTTGCTTTTCATGATTTTA CATCTAATGAGTTACAAATTGTAAAAACATAG
Upstream 100 bases:
>100_bases ATACAATCTATAAAAATATTCAACAATAACTTGCTACATTATTTATTTATTAATAAATGTTGAGCATAATATTAATATTC AACTCTAAAGAGAAAAAGTC
Downstream 100 bases:
>100_bases CTCTATATCCTACTGATCATCCCTTAAGCAAATATAAAAACATAGCCAAAAATGTAGAAAATATTTTTTCACATTTAGCA AGTAACCAACTGCTAGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MISNIIISDNSSITIFFTGKDEIEKFTKIFTVLDKNKAAKALFNHEVNIEYQDNRAILTSSTNFEFSDLNKIITHMLQHD FIINTNTIEQSLEQGCNTLKTDNLVICRFNDKPLYSINISIRNNTIILHPISTKYLDLSSEYNQKLMSLLKTHTSTSDIT IDNKQNSILLSINTAIYDIIQSLVSTLIKAQITEESDKEKILQQLTKLAFHDFTSNELQIVKT
Sequences:
>Translated_223_residues MISNIIISDNSSITIFFTGKDEIEKFTKIFTVLDKNKAAKALFNHEVNIEYQDNRAILTSSTNFEFSDLNKIITHMLQHD FIINTNTIEQSLEQGCNTLKTDNLVICRFNDKPLYSINISIRNNTIILHPISTKYLDLSSEYNQKLMSLLKTHTSTSDIT IDNKQNSILLSINTAIYDIIQSLVSTLIKAQITEESDKEKILQQLTKLAFHDFTSNELQIVKT >Mature_223_residues MISNIIISDNSSITIFFTGKDEIEKFTKIFTVLDKNKAAKALFNHEVNIEYQDNRAILTSSTNFEFSDLNKIITHMLQHD FIINTNTIEQSLEQGCNTLKTDNLVICRFNDKPLYSINISIRNNTIILHPISTKYLDLSSEYNQKLMSLLKTHTSTSDIT IDNKQNSILLSINTAIYDIIQSLVSTLIKAQITEESDKEKILQQLTKLAFHDFTSNELQIVKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25497; Mature: 25497
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISNIIISDNSSITIFFTGKDEIEKFTKIFTVLDKNKAAKALFNHEVNIEYQDNRAILTS CCCEEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEECCCEEEEEE STNFEFSDLNKIITHMLQHDFIINTNTIEQSLEQGCNTLKTDNLVICRFNDKPLYSINIS CCCCCHHHHHHHHHHHHHCCEEEECHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEEE IRNNTIILHPISTKYLDLSSEYNQKLMSLLKTHTSTSDITIDNKQNSILLSINTAIYDII EECCEEEEEECCCEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEHHHHHHHH QSLVSTLIKAQITEESDKEKILQQLTKLAFHDFTSNELQIVKT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEC >Mature Secondary Structure MISNIIISDNSSITIFFTGKDEIEKFTKIFTVLDKNKAAKALFNHEVNIEYQDNRAILTS CCCEEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEECCCEEEEEE STNFEFSDLNKIITHMLQHDFIINTNTIEQSLEQGCNTLKTDNLVICRFNDKPLYSINIS CCCCCHHHHHHHHHHHHHCCEEEECHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEEE IRNNTIILHPISTKYLDLSSEYNQKLMSLLKTHTSTSDITIDNKQNSILLSINTAIYDII EECCEEEEEECCCEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEHHHHHHHH QSLVSTLIKAQITEESDKEKILQQLTKLAFHDFTSNELQIVKT HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA