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The map label for this gene is 88608821

Identifier: 88608821

GI number: 88608821

Start: 177802

End: 178398

Strand: Reverse

Name: 88608821

Synonym: NSE_0209

Alternate gene names: NA

Gene position: 178398-177802 (Counterclockwise)

Preceding gene: 88608055

Following gene: 88608803

Centisome position: 20.77

GC content: 43.05

Gene sequence:

>597_bases
ATGTTGGAATCAGTCGTTGTACATGGCGTAGCAGATTCTATTACTTTATTTGAAGTAAAGCACGCCCTGCATGAACGTGG
GTTCGCACTACTACTTCTCCTTTTTTCATTACCGCTTTCAATACCATTGCCTGTTCCACCTGGATACACAACTGTTCTCG
CTATCCCTATACTGTTTTTCTCTGTACAGATTGTTCTTGGATGCGATTCTCCGTGGTTACCAAAATTCCTTGGGGAAAAA
TCGATGAAGCGCAAAAGTCTCGCTTTCTTGATCGAGAAGACGGTCCCAACGCTACGCAAGGTGGAAAAATTCACACGCCC
CAGATTCCCTATTTTGAACAACGCTCTTGGTGAAAGAATTTACGGTATCATCTCCCTGATGTGTGCTATTTCGATTGCAA
TTCCGTTACCATTAACAAATTTCATCCCGGCCGGCGGAATCGCGCTGATGTCTCTCGGGGTACTAAACAGAGATGGGATA
ATCAGTATACTGGGAATAATAACATCATTCGTAGGCCTTTTCATTTCAGCCTTAGTAATCATCTTAGGACAGAAAATGGT
TGTCGAACTCCTTTCTATCCTAGGAGTGAAATTGTGA

Upstream 100 bases:

>100_bases
AATGATCACGTGTGTGTTTTCAACATGAAAGCTGCCATTAAGAAAAGAAAGGGCAGTACTAAGGTTTTTACAAATGGGTA
AGAACCGGAACACTTCTGAT

Downstream 100 bases:

>100_bases
TTCCCTTACGCAACGATATCTATAACTAAAGGCACAGCACGTGCACTCACACTTACATCAACAAGCTCGGACTCAATAAG
CTCTTCCTGCGTCTTGGAGA

Product: exopolysaccharide synthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MLESVVVHGVADSITLFEVKHALHERGFALLLLLFSLPLSIPLPVPPGYTTVLAIPILFFSVQIVLGCDSPWLPKFLGEK
SMKRKSLAFLIEKTVPTLRKVEKFTRPRFPILNNALGERIYGIISLMCAISIAIPLPLTNFIPAGGIALMSLGVLNRDGI
ISILGIITSFVGLFISALVIILGQKMVVELLSILGVKL

Sequences:

>Translated_198_residues
MLESVVVHGVADSITLFEVKHALHERGFALLLLLFSLPLSIPLPVPPGYTTVLAIPILFFSVQIVLGCDSPWLPKFLGEK
SMKRKSLAFLIEKTVPTLRKVEKFTRPRFPILNNALGERIYGIISLMCAISIAIPLPLTNFIPAGGIALMSLGVLNRDGI
ISILGIITSFVGLFISALVIILGQKMVVELLSILGVKL
>Mature_198_residues
MLESVVVHGVADSITLFEVKHALHERGFALLLLLFSLPLSIPLPVPPGYTTVLAIPILFFSVQIVLGCDSPWLPKFLGEK
SMKRKSLAFLIEKTVPTLRKVEKFTRPRFPILNNALGERIYGIISLMCAISIAIPLPLTNFIPAGGIALMSLGVLNRDGI
ISILGIITSFVGLFISALVIILGQKMVVELLSILGVKL

Specific function: Unknown

COG id: COG3932

COG function: function code R; Uncharacterized ABC-type transport system, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti exoD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010331 [H]

Pfam domain/function: PF06055 ExoD [H]

EC number: NA

Molecular weight: Translated: 21511; Mature: 21511

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESVVVHGVADSITLFEVKHALHERGFALLLLLFSLPLSIPLPVPPGYTTVLAIPILFF
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
SVQIVLGCDSPWLPKFLGEKSMKRKSLAFLIEKTVPTLRKVEKFTRPRFPILNNALGERI
HHHHHHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
YGIISLMCAISIAIPLPLTNFIPAGGIALMSLGVLNRDGIISILGIITSFVGLFISALVI
HHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILGQKMVVELLSILGVKL
HHCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLESVVVHGVADSITLFEVKHALHERGFALLLLLFSLPLSIPLPVPPGYTTVLAIPILFF
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
SVQIVLGCDSPWLPKFLGEKSMKRKSLAFLIEKTVPTLRKVEKFTRPRFPILNNALGERI
HHHHHHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
YGIISLMCAISIAIPLPLTNFIPAGGIALMSLGVLNRDGIISILGIITSFVGLFISALVI
HHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILGQKMVVELLSILGVKL
HHCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]