| Definition | Neorickettsia sennetsu str. Miyayama chromosome, complete genome. |
|---|---|
| Accession | NC_007798 |
| Length | 859,006 |
Click here to switch to the map view.
The map label for this gene is pstC
Identifier: 88608803
GI number: 88608803
Start: 172059
End: 173033
Strand: Reverse
Name: pstC
Synonym: NSE_0204
Alternate gene names: 88608803
Gene position: 173033-172059 (Counterclockwise)
Preceding gene: 88608821
Following gene: 88608056
Centisome position: 20.14
GC content: 43.9
Gene sequence:
>975_bases ATGCTACTCGTGTCTGCCGTATTAGCTTTTTCCCTTAGCAGTACCCTTATCCTATTTTTAGGTATTTTCTTTACTCTCTT GCTCCGGTCAAAGAGAATGTTTGTTTTGTGTGCTGCGATTGCGTTGGTCGCAACTTCGATGGTCACAGCATTGATCATCT TGTCCCTTGTGACACAGACGGTTTCGTTCTTCCGTGTGGTTTCGCCAACGGATTTCTTTTTTGGGACCGTGTGGGCACCA AACGGAACAATTGTAGACGGGCAAGTCGAAAAACTTTTCGGTATACTACCACTACTTTTTGGAACGACAATGGTGGCTTT AATTGGTAGCATAGTTGGCACACCTATAGGTATAGGAGCAGCCATAGCATTAACCTACTTCATACCGAAAAAGGTGAGGA ATGTGATTAAGCCAATAATAGAAATAATGGCTGGTATACCAACTGTAATATACGGCTACTTTTCCCTGACGTTTGTGCCA GCCTTGGTGCAAAAACTTGGACACCTTCTGCACCTTAACATTTCAACTGAAAGTGCCTTATCTGCCGGGATAGTCATAGG TATTATGGTCATTCCTCTTATCACATCTCTCACTGACGACCTTTTGCGTACAACACCGAAAAGCCTATATTACGGCGCAG CAGCACTTGGTAGCACACAGACTGAAATCATATTAAGAGCTGTCTTGCCAAACTGCCTACCTGGACTAGTGGCAATTGTT CTCTTAGGTTTCTCAAGAGCACTGGGTGAGACCATGGTAGTGCTCATGCTAACCGGAATTTCAGCAAATATTGATTACAA CATACTCCACACAGTCACCACGGTGACCGTCCAGATTGTCACAATCTTAACAGGTGACCAGACACTAAATACTGAAGAAA GTCTGTCTGCATACGCGCTAGGTATGACGCTCTTCATATTGACCTGGGTATTGAACGCCGTTTCAATGTCTATGTCTAAA AGGCACGTACATTAG
Upstream 100 bases:
>100_bases TACTAGAAAAAGCACAAGAAGTGTGTAAACCTTGGAGCAGGAGGGCAGTCGTAATTTTGTGGATGGTACAAGTCGCGCAA TTAGACTAAATACAGCGTTG
Downstream 100 bases:
>100_bases ATGTAGTGGACACAACAGAATCCTGCAAAAGGAAAACTTTGCCCCCTTATCAAATGTATTCAAAATTGAGTCGGAGACAG CTTCTCAGCCAGCTAAACTA
Product: phosphate ABC transporter permease PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MLLVSAVLAFSLSSTLILFLGIFFTLLLRSKRMFVLCAAIALVATSMVTALIILSLVTQTVSFFRVVSPTDFFFGTVWAP NGTIVDGQVEKLFGILPLLFGTTMVALIGSIVGTPIGIGAAIALTYFIPKKVRNVIKPIIEIMAGIPTVIYGYFSLTFVP ALVQKLGHLLHLNISTESALSAGIVIGIMVIPLITSLTDDLLRTTPKSLYYGAAALGSTQTEIILRAVLPNCLPGLVAIV LLGFSRALGETMVVLMLTGISANIDYNILHTVTTVTVQIVTILTGDQTLNTEESLSAYALGMTLFILTWVLNAVSMSMSK RHVH
Sequences:
>Translated_324_residues MLLVSAVLAFSLSSTLILFLGIFFTLLLRSKRMFVLCAAIALVATSMVTALIILSLVTQTVSFFRVVSPTDFFFGTVWAP NGTIVDGQVEKLFGILPLLFGTTMVALIGSIVGTPIGIGAAIALTYFIPKKVRNVIKPIIEIMAGIPTVIYGYFSLTFVP ALVQKLGHLLHLNISTESALSAGIVIGIMVIPLITSLTDDLLRTTPKSLYYGAAALGSTQTEIILRAVLPNCLPGLVAIV LLGFSRALGETMVVLMLTGISANIDYNILHTVTTVTVQIVTILTGDQTLNTEESLSAYALGMTLFILTWVLNAVSMSMSK RHVH >Mature_324_residues MLLVSAVLAFSLSSTLILFLGIFFTLLLRSKRMFVLCAAIALVATSMVTALIILSLVTQTVSFFRVVSPTDFFFGTVWAP NGTIVDGQVEKLFGILPLLFGTTMVALIGSIVGTPIGIGAAIALTYFIPKKVRNVIKPIIEIMAGIPTVIYGYFSLTFVP ALVQKLGHLLHLNISTESALSAGIVIGIMVIPLITSLTDDLLRTTPKSLYYGAAALGSTQTEIILRAVLPNCLPGLVAIV LLGFSRALGETMVVLMLTGISANIDYNILHTVTTVTVQIVTILTGDQTLNTEESLSAYALGMTLFILTWVLNAVSMSMSK RHVH
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=270, Percent_Identity=28.5185185185185, Blast_Score=94, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34664; Mature: 34664
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVSAVLAFSLSSTLILFLGIFFTLLLRSKRMFVLCAAIALVATSMVTALIILSLVTQT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSFFRVVSPTDFFFGTVWAPNGTIVDGQVEKLFGILPLLFGTTMVALIGSIVGTPIGIGA HHHHHHCCCCHHHEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AIALTYFIPKKVRNVIKPIIEIMAGIPTVIYGYFSLTFVPALVQKLGHLLHLNISTESAL HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHH SAGIVIGIMVIPLITSLTDDLLRTTPKSLYYGAAALGSTQTEIILRAVLPNCLPGLVAIV HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LLGFSRALGETMVVLMLTGISANIDYNILHTVTTVTVQIVTILTGDQTLNTEESLSAYAL HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHH GMTLFILTWVLNAVSMSMSKRHVH HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLLVSAVLAFSLSSTLILFLGIFFTLLLRSKRMFVLCAAIALVATSMVTALIILSLVTQT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSFFRVVSPTDFFFGTVWAPNGTIVDGQVEKLFGILPLLFGTTMVALIGSIVGTPIGIGA HHHHHHCCCCHHHEEEEECCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AIALTYFIPKKVRNVIKPIIEIMAGIPTVIYGYFSLTFVPALVQKLGHLLHLNISTESAL HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHH SAGIVIGIMVIPLITSLTDDLLRTTPKSLYYGAAALGSTQTEIILRAVLPNCLPGLVAIV HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LLGFSRALGETMVVLMLTGISANIDYNILHTVTTVTVQIVTILTGDQTLNTEESLSAYAL HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHH GMTLFILTWVLNAVSMSMSKRHVH HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]