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The map label for this gene is atpE

Identifier: 88608692

GI number: 88608692

Start: 323916

End: 324143

Strand: Direct

Name: atpE

Synonym: NSE_0397

Alternate gene names: 88608692

Gene position: 323916-324143 (Clockwise)

Preceding gene: 88608811

Following gene: 88608612

Centisome position: 37.71

GC content: 41.67

Gene sequence:

>228_bases
ATGGAGTTAGAAGGTCTAAAATTTTTGGGAATTGGTCTCTCTGTCGTTGGTATGTTGGGGGCTGCTATAGGAGTGAGTAA
CATATTCTCCATGATGCTTAATGGCATTGCTAGAAACCCTGAGTCCGAAGAAAAATTGAAGAAGTATGTCTATGCAGGTG
CCGCTTTGACGGAAGCAATGGGGCTTTTCTCATTCGTTTTAGCATTACTACTGATTTTTGTTGCGTAG

Upstream 100 bases:

>100_bases
TTCATAGCTATGTTGCAGGCGTATATTTTTGTTATGTTGACCTGCGTCTATTTGAATGATTCACTGTTCAAACACTAACA
TGGTTATTTTATAAGGGTAT

Downstream 100 bases:

>100_bases
ATGCCTCAGTTTGATATATCTACCTATTTTGGGCAGATATTTTGGTTTTGTATTTCCTTTCTATTTTTATACTGCTTCGT
CAGGTTCATCTTTGTTCCTA

Product: F0F1 ATP synthase subunit C

Products: NA

Alternate protein names: ATP synthase F(0) sector subunit c; F-type ATPase subunit c; F-ATPase subunit c; Lipid-binding protein

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MELEGLKFLGIGLSVVGMLGAAIGVSNIFSMMLNGIARNPESEEKLKKYVYAGAALTEAMGLFSFVLALLLIFVA

Sequences:

>Translated_75_residues
MELEGLKFLGIGLSVVGMLGAAIGVSNIFSMMLNGIARNPESEEKLKKYVYAGAALTEAMGLFSFVLALLLIFVA
>Mature_75_residues
MELEGLKFLGIGLSVVGMLGAAIGVSNIFSMMLNGIARNPESEEKLKKYVYAGAALTEAMGLFSFVLALLLIFVA

Specific function: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits

COG id: COG0636

COG function: function code C; F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase C chain family

Homologues:

Organism=Saccharomyces cerevisiae, GI6226533, Length=67, Percent_Identity=40.2985074626866, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPL_NEOSM (Q2GE12)

Other databases:

- EMBL:   CP000237
- RefSeq:   YP_506284.1
- ProteinModelPortal:   Q2GE12
- SMR:   Q2GE12
- STRING:   Q2GE12
- GeneID:   3931792
- GenomeReviews:   CP000237_GR
- KEGG:   nse:NSE_0397
- TIGR:   NSE_0397
- eggNOG:   COG0636
- HOGENOM:   HBG753983
- OMA:   FMAIGMY
- ProtClustDB:   PRK07558
- BioCyc:   NSEN222891:NSE_0397-MONOMER
- HAMAP:   MF_01396
- InterPro:   IPR000454
- InterPro:   IPR002379
- Gene3D:   G3DSA:1.20.20.10
- PRINTS:   PR00124

Pfam domain/function: PF00137 ATP-synt_C; SSF81333 ATPase_F0/V0_c

EC number: NA

Molecular weight: Translated: 7941; Mature: 7941

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00605 ATPASE_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10c9e638)-; HASH(0x1014cd08)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELEGLKFLGIGLSVVGMLGAAIGVSNIFSMMLNGIARNPESEEKLKKYVYAGAALTEAM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GLFSFVLALLLIFVA
HHHHHHHHHHHHHHH
>Mature Secondary Structure
MELEGLKFLGIGLSVVGMLGAAIGVSNIFSMMLNGIARNPESEEKLKKYVYAGAALTEAM
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
GLFSFVLALLLIFVA
HHHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA