Click here to switch to the map view.

The map label for this gene is atpX

Identifier: 88608612

GI number: 88608612

Start: 324144

End: 324674

Strand: Direct

Name: atpX

Synonym: NSE_0398

Alternate gene names: NA

Gene position: 324144-324674 (Clockwise)

Preceding gene: 88608692

Following gene: 88608378

Centisome position: 37.73

GC content: 40.87

Gene sequence:

>531_bases
ATGCCTCAGTTTGATATATCTACCTATTTTGGGCAGATATTTTGGTTTTGTATTTCCTTTCTATTTTTATACTGCTTCGT
CAGGTTCATCTTTGTTCCTAAGTTTAATGCTCTGCTAAATGTGCGGGCTTCTGTGTTGAAGGAGAATCGCAAGTTAATAG
CTAAAATGAAAGAGGATCTGGAGCATTTGGAGAGCGTGTGGAATGCTGCCCTCTCGGATGCCCGCTTTGCTGCTGAAAAT
ATCCTTCGTGATGCAGTTATCTCTGTTGAAGAATTGAGAGGTGGTGTTGCCGAGCGCTTAGCTGTTTTAAATAGTGAGTT
AAGAGAGGAGAATAAGGTCCTAATTGACGCTTTTTTTGCTCAGAAGTTGCTTGAGCTTGAAGAATTATTTGTGAAGTTAG
TGGAAGACTATTATGTAGTAATCTATACTCCGTTTGTGGTTGGTTCTGGCGGTGTTCACGTTGAATCTGTGCGTAAAAAA
GCGCTGGAGGATTTTGCTTGTCTTTATGAGAGATTAAGGGGATGTCGGTAG

Upstream 100 bases:

>100_bases
AGAAAAATTGAAGAAGTATGTCTATGCAGGTGCCGCTTTGACGGAAGCAATGGGGCTTTTCTCATTCGTTTTAGCATTAC
TACTGATTTTTGTTGCGTAG

Downstream 100 bases:

>100_bases
AAAGTGTAGTCATAGGTTTCGCGTTTTTTACTGCGTTTGGTGTCCTTGCTAAACCTGTTTTTAGCGTATTTATGCGCTCC
CTTGCAGGTCATTCGGGTAA

Product: ATP synthase F0 subunit B'

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MPQFDISTYFGQIFWFCISFLFLYCFVRFIFVPKFNALLNVRASVLKENRKLIAKMKEDLEHLESVWNAALSDARFAAEN
ILRDAVISVEELRGGVAERLAVLNSELREENKVLIDAFFAQKLLELEELFVKLVEDYYVVIYTPFVVGSGGVHVESVRKK
ALEDFACLYERLRGCR

Sequences:

>Translated_176_residues
MPQFDISTYFGQIFWFCISFLFLYCFVRFIFVPKFNALLNVRASVLKENRKLIAKMKEDLEHLESVWNAALSDARFAAEN
ILRDAVISVEELRGGVAERLAVLNSELREENKVLIDAFFAQKLLELEELFVKLVEDYYVVIYTPFVVGSGGVHVESVRKK
ALEDFACLYERLRGCR
>Mature_175_residues
PQFDISTYFGQIFWFCISFLFLYCFVRFIFVPKFNALLNVRASVLKENRKLIAKMKEDLEHLESVWNAALSDARFAAENI
LRDAVISVEELRGGVAERLAVLNSELREENKVLIDAFFAQKLLELEELFVKLVEDYYVVIYTPFVVGSGGVHVESVRKKA
LEDFACLYERLRGCR

Specific function: Unknown

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20390; Mature: 20259

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQFDISTYFGQIFWFCISFLFLYCFVRFIFVPKFNALLNVRASVLKENRKLIAKMKEDL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHLESVWNAALSDARFAAENILRDAVISVEELRGGVAERLAVLNSELREENKVLIDAFFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
QKLLELEELFVKLVEDYYVVIYTPFVVGSGGVHVESVRKKALEDFACLYERLRGCR
HHHHHHHHHHHHHHHHHHEEEEECHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PQFDISTYFGQIFWFCISFLFLYCFVRFIFVPKFNALLNVRASVLKENRKLIAKMKEDL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHLESVWNAALSDARFAAENILRDAVISVEELRGGVAERLAVLNSELREENKVLIDAFFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
QKLLELEELFVKLVEDYYVVIYTPFVVGSGGVHVESVRKKALEDFACLYERLRGCR
HHHHHHHHHHHHHHHHHHEEEEECHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA