Click here to switch to the map view.

The map label for this gene is 88608316

Identifier: 88608316

GI number: 88608316

Start: 849584

End: 850786

Strand: Direct

Name: 88608316

Synonym: NSE_0963

Alternate gene names: NA

Gene position: 849584-850786 (Clockwise)

Preceding gene: 88608652

Following gene: 88607982

Centisome position: 98.9

GC content: 41.65

Gene sequence:

>1203_bases
TTGTTAGACTTAGCCAAAATACTAACACGCATGAAAAAGTTGATAAATGACAAACTAGAAAATAAAACTGATGAAAGTTC
TTCGGATGCCCGGTACAGGGCAAGGATGACCGAACAGCAACAGAATCATTTAGAAGAGTTAAAAAAGTTACAAGAGAGTT
TCAAAGAAAAGACCGAAGGCATAAGCGACATCGAGTTTCGTGGAGACTTTGCATCTGATATCAACGAGGAAGACGAATTA
AAAGCTGAAAAAAAAGTAGAAGTATCTAGAAGAAAGGGACTTTTCAGAGTAATCGCTGATAAATTCTCTTTTGTTGTTCG
TCCATCCAATTGGGCAAAAGTCATATCTAGCCTTAGGAGTTTGTTCGGTGGAAAGTCCGTTGATCAGCTTCTTTTAGAAA
TAAAGGCTGGAAACAAGACGATCAAGTCTCTTCTTGCTCTTCTGAAGCACAAGGAAAAACTTTCCTTGCAGATTAGGATA
GCAGCTTTATTAAGGGAAATCAGGCTCAGTAGAAACATAGGTAGAGAGTCCTTGAATAGAATTTCGGCTATCCAAAGTAG
CTTGATTTCAAGTCTCAGTACGGCAGTTAGGGAGAGTTCTGGAAAGACAGATCTACAAAAGCTTTTGGGCTATCAGCACC
AGGCTTCAGCACAGTCGAAGTTCCTTACTACACAGCTTGTTAAAGATGTACAGGTTTCGCATTCAGCTACACAAAGCCAA
ACCAAACCATATGACCCAAGAAGTGAATGTCCTCCTAGTTTCTTTCCGGCGTATTATGTATTTAGTGAGTCTCAGTCTCA
TACATGGATAGATGACCTACAGATTCTGAAGGGGATAAATATGCCGGCCACCCTGAAAAATCTCTTCTCTGAAGTCAAGA
ACAGGATAATCGCGGCTTTTTCCGCGGAGGTTTTAGGCACAGCTACAGTTGGCATGCAGATGCAAACAGCGACAGCTTCT
AGTAGCAGGAGAGCAGAAAATCCTTTTGGTCAAGATTCTCATATTCAACATGGGCATATTTTCGAACACCGTTCCCATCG
CCATGGGAGTGGATGTCCTTGTTGTAGTAGTGTACTTGAGACAAGTCAATCATTACAATTCTCTTACTCACAGTCCGCTA
TAAGATTAGGAGGACCAAGTGATATCCTCTCTTCAGCGCGTTGTAACCTAGCTGCAAGAACGCAAGTGCAGGTGCAGATC
TAG

Upstream 100 bases:

>100_bases
GCTGTGACTATACTGTTGTGCCCAAAACACGGAAATTAAAATCCCGATGATTGTTAAAAGGGAAGATAATTGTCCTAGCA
TTTTGCAGATTTAAAACTCT

Downstream 100 bases:

>100_bases
TAGTTTTTCTGTGCTTGGAGATGGAATACCAGTGATGCAGAGATTAACTCTAACTCACTTTACAAGAGAGGAGTGTGTAA
TCACAGCCACAAAAGTCTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MLDLAKILTRMKKLINDKLENKTDESSSDARYRARMTEQQQNHLEELKKLQESFKEKTEGISDIEFRGDFASDINEEDEL
KAEKKVEVSRRKGLFRVIADKFSFVVRPSNWAKVISSLRSLFGGKSVDQLLLEIKAGNKTIKSLLALLKHKEKLSLQIRI
AALLREIRLSRNIGRESLNRISAIQSSLISSLSTAVRESSGKTDLQKLLGYQHQASAQSKFLTTQLVKDVQVSHSATQSQ
TKPYDPRSECPPSFFPAYYVFSESQSHTWIDDLQILKGINMPATLKNLFSEVKNRIIAAFSAEVLGTATVGMQMQTATAS
SSRRAENPFGQDSHIQHGHIFEHRSHRHGSGCPCCSSVLETSQSLQFSYSQSAIRLGGPSDILSSARCNLAARTQVQVQI

Sequences:

>Translated_400_residues
MLDLAKILTRMKKLINDKLENKTDESSSDARYRARMTEQQQNHLEELKKLQESFKEKTEGISDIEFRGDFASDINEEDEL
KAEKKVEVSRRKGLFRVIADKFSFVVRPSNWAKVISSLRSLFGGKSVDQLLLEIKAGNKTIKSLLALLKHKEKLSLQIRI
AALLREIRLSRNIGRESLNRISAIQSSLISSLSTAVRESSGKTDLQKLLGYQHQASAQSKFLTTQLVKDVQVSHSATQSQ
TKPYDPRSECPPSFFPAYYVFSESQSHTWIDDLQILKGINMPATLKNLFSEVKNRIIAAFSAEVLGTATVGMQMQTATAS
SSRRAENPFGQDSHIQHGHIFEHRSHRHGSGCPCCSSVLETSQSLQFSYSQSAIRLGGPSDILSSARCNLAARTQVQVQI
>Mature_400_residues
MLDLAKILTRMKKLINDKLENKTDESSSDARYRARMTEQQQNHLEELKKLQESFKEKTEGISDIEFRGDFASDINEEDEL
KAEKKVEVSRRKGLFRVIADKFSFVVRPSNWAKVISSLRSLFGGKSVDQLLLEIKAGNKTIKSLLALLKHKEKLSLQIRI
AALLREIRLSRNIGRESLNRISAIQSSLISSLSTAVRESSGKTDLQKLLGYQHQASAQSKFLTTQLVKDVQVSHSATQSQ
TKPYDPRSECPPSFFPAYYVFSESQSHTWIDDLQILKGINMPATLKNLFSEVKNRIIAAFSAEVLGTATVGMQMQTATAS
SSRRAENPFGQDSHIQHGHIFEHRSHRHGSGCPCCSSVLETSQSLQFSYSQSAIRLGGPSDILSSARCNLAARTQVQVQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44773; Mature: 44773

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLAKILTRMKKLINDKLENKTDESSSDARYRARMTEQQQNHLEELKKLQESFKEKTEG
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ISDIEFRGDFASDINEEDELKAEKKVEVSRRKGLFRVIADKFSFVVRPSNWAKVISSLRS
CCCCEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHH
LFGGKSVDQLLLEIKAGNKTIKSLLALLKHKEKLSLQIRIAALLREIRLSRNIGRESLNR
HHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ISAIQSSLISSLSTAVRESSGKTDLQKLLGYQHQASAQSKFLTTQLVKDVQVSHSATQSQ
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TKPYDPRSECPPSFFPAYYVFSESQSHTWIDDLQILKGINMPATLKNLFSEVKNRIIAAF
CCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SAEVLGTATVGMQMQTATASSSRRAENPFGQDSHIQHGHIFEHRSHRHGSGCPCCSSVLE
HHHHHHHHHHCCEEEHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHH
TSQSLQFSYSQSAIRLGGPSDILSSARCNLAARTQVQVQI
HHHHHHHHHCCCEEECCCHHHHHHHHHCCCEECCEEEEEC
>Mature Secondary Structure
MLDLAKILTRMKKLINDKLENKTDESSSDARYRARMTEQQQNHLEELKKLQESFKEKTEG
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ISDIEFRGDFASDINEEDELKAEKKVEVSRRKGLFRVIADKFSFVVRPSNWAKVISSLRS
CCCCEECCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHH
LFGGKSVDQLLLEIKAGNKTIKSLLALLKHKEKLSLQIRIAALLREIRLSRNIGRESLNR
HHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ISAIQSSLISSLSTAVRESSGKTDLQKLLGYQHQASAQSKFLTTQLVKDVQVSHSATQSQ
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TKPYDPRSECPPSFFPAYYVFSESQSHTWIDDLQILKGINMPATLKNLFSEVKNRIIAAF
CCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SAEVLGTATVGMQMQTATASSSRRAENPFGQDSHIQHGHIFEHRSHRHGSGCPCCSSVLE
HHHHHHHHHHCCEEEHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHH
TSQSLQFSYSQSAIRLGGPSDILSSARCNLAARTQVQVQI
HHHHHHHHHCCCEEECCCHHHHHHHHHCCCEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA