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The map label for this gene is 88608041

Identifier: 88608041

GI number: 88608041

Start: 825577

End: 826344

Strand: Direct

Name: 88608041

Synonym: NSE_0935

Alternate gene names: NA

Gene position: 825577-826344 (Clockwise)

Preceding gene: 88608430

Following gene: 88607983

Centisome position: 96.11

GC content: 40.49

Gene sequence:

>768_bases
ATGTATAGCAAATCGAGTTATCTCATGATTCTCAAATTCTATGATAGACTCGGCATGGATACTATGACTGCTGATATTTC
CTCACCTAACCAAGCATCTATCACGCAAGTTGGTGGAATGCCCATTGATATGAAAGAGTCCGCTGAAAGCACAGCACGTA
AGCATAAAACTCCGGAAAGAGATCTGACATACGTAACAACTCTCGGCGAGCTTAAGGCGCTCGTCTACAATTTTGAAGGC
TGTCAGCTTAAAAAGAGTGCTAAAAACACAGTTTTTTGTGATGGCAATCCGGATGCAAAAATTATGTTAATTGGTGAAGC
ACCTGGAGAACAAGAAGATAAGCTTGGAATTCCTTTTTGTGGCAGGAGCGGTAACTTGTTAGATAAAATGCTTCAAGCTA
TAGGACTGGACCGAACGAAGGTATACATAACAAATGCAGTTTTCTGGAGACCACCTGGAAATAGACGACCGACCCCCGAA
GAAATAGAGATTTGCAAGCCATTCTTAGAACACCATATACGCCTTGTATTACCCAAGTTAATCGTGCTACTTGGTTCTAC
GGCTGCTTCTTCGGTTTTAAAAAGCCAAGACAGAATTTCTACATTGAGAAATAAATTGCACGAGTATAAAAATCCATTTA
TTCGCGAGGGAATTACTACGACCGTAATGTTTCACCCATCGTATCTCTTGAGACAGCCTGCTCAGAAAAAATTGGCCTGG
GAAGATTTAAAACTTATTCGTTCATATATTGACACCCATGGTCTTTAA

Upstream 100 bases:

>100_bases
TATGACCAGGCAAAAATATTAATACCCTAAGGATATACCAGGTCCTATTGACAAAGAGCACTTCAATGTAATCAAATGGC
ACTAGTCTTACCTTATCTGC

Downstream 100 bases:

>100_bases
CTTTAGTGGAGTAAATAGATTCTTTCTTATTCTTTTTGCACTAGCGTCCCTAACTCTCACACCGCGCCTGGGCAAGACAA
CTGAAGAACTCGATATATTA

Product: uracil-DNA glycosylase

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; DNA Glycosylase; Uracil-DNA Glycosylase Family 4 Protein; DNA Polymerase Bacteriophage-Type; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein; Bacteriophage-Related DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Phage Spo1 DNA Polymerase-Related Protein; Phage DNA Polymerase; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; DNA Polymerase Bacteriophage-Type Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Phage Related DNA Polymerase; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase C-Terminal Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MYSKSSYLMILKFYDRLGMDTMTADISSPNQASITQVGGMPIDMKESAESTARKHKTPERDLTYVTTLGELKALVYNFEG
CQLKKSAKNTVFCDGNPDAKIMLIGEAPGEQEDKLGIPFCGRSGNLLDKMLQAIGLDRTKVYITNAVFWRPPGNRRPTPE
EIEICKPFLEHHIRLVLPKLIVLLGSTAASSVLKSQDRISTLRNKLHEYKNPFIREGITTTVMFHPSYLLRQPAQKKLAW
EDLKLIRSYIDTHGL

Sequences:

>Translated_255_residues
MYSKSSYLMILKFYDRLGMDTMTADISSPNQASITQVGGMPIDMKESAESTARKHKTPERDLTYVTTLGELKALVYNFEG
CQLKKSAKNTVFCDGNPDAKIMLIGEAPGEQEDKLGIPFCGRSGNLLDKMLQAIGLDRTKVYITNAVFWRPPGNRRPTPE
EIEICKPFLEHHIRLVLPKLIVLLGSTAASSVLKSQDRISTLRNKLHEYKNPFIREGITTTVMFHPSYLLRQPAQKKLAW
EDLKLIRSYIDTHGL
>Mature_255_residues
MYSKSSYLMILKFYDRLGMDTMTADISSPNQASITQVGGMPIDMKESAESTARKHKTPERDLTYVTTLGELKALVYNFEG
CQLKKSAKNTVFCDGNPDAKIMLIGEAPGEQEDKLGIPFCGRSGNLLDKMLQAIGLDRTKVYITNAVFWRPPGNRRPTPE
EIEICKPFLEHHIRLVLPKLIVLLGSTAASSVLKSQDRISTLRNKLHEYKNPFIREGITTTVMFHPSYLLRQPAQKKLAW
EDLKLIRSYIDTHGL

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 28791; Mature: 28791

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSKSSYLMILKFYDRLGMDTMTADISSPNQASITQVGGMPIDMKESAESTARKHKTPER
CCCCCHHEEHHHHHHHHCCCCEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCC
DLTYVTTLGELKALVYNFEGCQLKKSAKNTVFCDGNPDAKIMLIGEAPGEQEDKLGIPFC
CCCHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCEE
GRSGNLLDKMLQAIGLDRTKVYITNAVFWRPPGNRRPTPEEIEICKPFLEHHIRLVLPKL
CCCCHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IVLLGSTAASSVLKSQDRISTLRNKLHEYKNPFIREGITTTVMFHPSYLLRQPAQKKLAW
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEECCHHHHHCCHHHHHHH
EDLKLIRSYIDTHGL
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MYSKSSYLMILKFYDRLGMDTMTADISSPNQASITQVGGMPIDMKESAESTARKHKTPER
CCCCCHHEEHHHHHHHHCCCCEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCC
DLTYVTTLGELKALVYNFEGCQLKKSAKNTVFCDGNPDAKIMLIGEAPGEQEDKLGIPFC
CCCHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCEE
GRSGNLLDKMLQAIGLDRTKVYITNAVFWRPPGNRRPTPEEIEICKPFLEHHIRLVLPKL
CCCCHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IVLLGSTAASSVLKSQDRISTLRNKLHEYKNPFIREGITTTVMFHPSYLLRQPAQKKLAW
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEECCHHHHHCCHHHHHHH
EDLKLIRSYIDTHGL
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA