Click here to switch to the map view.

The map label for this gene is 88607239

Identifier: 88607239

GI number: 88607239

Start: 85022

End: 85330

Strand: Reverse

Name: 88607239

Synonym: APH_0078

Alternate gene names: NA

Gene position: 85330-85022 (Counterclockwise)

Preceding gene: 88607814

Following gene: 88607780

Centisome position: 5.8

GC content: 46.28

Gene sequence:

>309_bases
GTGAATAAGAATGGGTCACGTGCACTGGTCCATCGGCCTGCTAAAAACGCGATGCAGTCTGGCACGTTTCGTGGTGATCT
TTGGTATGTAGAGTTTGAGCCATCACGCTCGCAGTATGTTGAGGGTTTGATGGGGTGGACAGGTTCAGAAGAAACATTGC
AACAAGTACGCATGTGCTTTGGGAGCAAGGAAGATGCAATTGCTTATGTAGAAGCGCATGGTATACCCTATATTTTGCTG
CAGGATGCTACTGCTTCGAGAGTTCCTAAGTCATATGCCACAAATTTCTTAAGAAAGAGGGGCTTATAG

Upstream 100 bases:

>100_bases
TTCTTTCATCGCTTCTTCGAACTTACTACTGATATGAATGGACATTTAGGCAATACCTGTTACACTTAATGTATCGTACT
CTGTTCGTAAATGATTACAA

Downstream 100 bases:

>100_bases
CCTATCTTCGGCGTTTAAGTTTATAACTAATGTGTTGTGAGAAGATTCTGACTTGTGGTAAAGTACCTCCGTAAATTGCT
GTCCTAGTGGGTTTGAAGTT

Product: putative oxidoreductase

Products: NA

Alternate protein names: ETC Complex I Subunit Conserved Region; Oxidoreductase; NADH-Ubiquinone Oxidoreductase; NADH-Ubiquinone Oxidoreductase-Related Protein; NADH-Ubiquinone Oxidoreductase Subunit; NADH Dehydrogenase; ETC Complex I Subunit Conserved Region Superfamily; NDUFA4 Family NADH Ubiquinone Oxidoreductase Subunit; ETC Complex I Subunit Region Protein; NADH Dehydrogenase Fe-S; NADH-Ubiquinone Oxidoreductase Family Protein; NADHUbiquinone Oxidoreductase; NADH Dehydrogenase Iron-Sulfur ; ETC Complex Subunit I Conserved Region Protein; Etc Complex I Subunit Conserved Region; NADH-Quinone Oxidoreductase; NADH-Ubiquinone Oxidoreductase Protein

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MNKNGSRALVHRPAKNAMQSGTFRGDLWYVEFEPSRSQYVEGLMGWTGSEETLQQVRMCFGSKEDAIAYVEAHGIPYILL
QDATASRVPKSYATNFLRKRGL

Sequences:

>Translated_102_residues
MNKNGSRALVHRPAKNAMQSGTFRGDLWYVEFEPSRSQYVEGLMGWTGSEETLQQVRMCFGSKEDAIAYVEAHGIPYILL
QDATASRVPKSYATNFLRKRGL
>Mature_102_residues
MNKNGSRALVHRPAKNAMQSGTFRGDLWYVEFEPSRSQYVEGLMGWTGSEETLQQVRMCFGSKEDAIAYVEAHGIPYILL
QDATASRVPKSYATNFLRKRGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11517; Mature: 11517

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNGSRALVHRPAKNAMQSGTFRGDLWYVEFEPSRSQYVEGLMGWTGSEETLQQVRMCF
CCCCCCCCEEECCHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHH
GSKEDAIAYVEAHGIPYILLQDATASRVPKSYATNFLRKRGL
CCCCCCEEEEECCCCCEEEEECCCHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNKNGSRALVHRPAKNAMQSGTFRGDLWYVEFEPSRSQYVEGLMGWTGSEETLQQVRMCF
CCCCCCCCEEECCHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHH
GSKEDAIAYVEAHGIPYILLQDATASRVPKSYATNFLRKRGL
CCCCCCEEEEECCCCCEEEEECCCHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA