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The map label for this gene is 88607780

Identifier: 88607780

GI number: 88607780

Start: 83993

End: 84916

Strand: Reverse

Name: 88607780

Synonym: APH_0077

Alternate gene names: NA

Gene position: 84916-83993 (Counterclockwise)

Preceding gene: 88607239

Following gene: 88607257

Centisome position: 5.77

GC content: 40.69

Gene sequence:

>924_bases
ATGTTCTTTACTTTGCTGTCCAAGGTCCTTCCTTTGTACACAACTATTCTACTGGGGTTTGTAGCCGGAAAGTTCATCAA
GCTTGACAGTTCCACGCTCGGAAAATTGTTGTTCTATATTATAGGACCCTCTGTTGTATTCTTCGGGATTATAAAAACCA
AAATCAGCCCGGAGTTTGCGTCCCTACCACTCATAACGTTTGTGATCTGTTGCATAATGTCCTTTGTGGTATACAAGGTC
TCCGCACTCGTCTTCAGAGATCACACAAGGAACATGCTAGCTTTTAGTTCTGGAAGTTCTAGTATGGGCTTTTTTGGACT
TCCCGTAGCTATAGCGTTGTTTGATGAGGAAACTGTATCTGTATATCTGTTGTGCTACATTGGAATGCTGTTTTTTGAAA
ATAGCTTTGGGTTTTATATTGTAACACAAAGACTATATTCTCCTCGTCAGTGCGCGAAAAGGCTAATCCTTCTTCCTGCT
TTTCACGCGACTATTGCTGCTTTTTTATTAAACTACTTTCATGTGCCGATACCCACATTTTTGTTTGGCATAGCGAACAG
TATGACCAACTCTTATATGGTTTTAGGCACGATTTTGCTGGGCATAGCTATAGCTAATATCAAAGATTTTGCGATAGATT
TTAAACTTATCGTACTTACAGTATTGATAAAATACGTGGCTTGGCCTCTTGTTATACTTCTGCTAATTTTCCTCGATCAG
ATTGGACCGGGTTGGTACAACACGCAGGCTTACCAGGCGCTAATTCTGCTTGCGATTATACCAGTATCAAGCACGGGAGT
GATACTTGCTTCAATGTTCAATTATCAGCCGGACAGAGCAGCAATGATTTTGCTCATAAGCACTGTAATTGGAATGTTCT
ACGTTCCTCTTATGATCTCGTTATTGTTGCACGTGCATCCGTAG

Upstream 100 bases:

>100_bases
CTTCGGCGTTTAAGTTTATAACTAATGTGTTGTGAGAAGATTCTGACTTGTGGTAAAGTACCTCCGTAAATTGCTGTCCT
AGTGGGTTTGAAGTTCAGTT

Downstream 100 bases:

>100_bases
AACATTGGCATAACTGTAAGATGTTCTTTTCTGGTATGAATGCTAGAGTCCTGCTATGGCGCGCGTGTCTGCTTTATTAT
GACGCCTGCTGTATAAAAAT

Product: auxin efflux carrier family protein

Products: NA

Alternate protein names: Permease; Auxin Efflux Carrier Family Protein; Membrane Transport Protein Auxin Efflux

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MFFTLLSKVLPLYTTILLGFVAGKFIKLDSSTLGKLLFYIIGPSVVFFGIIKTKISPEFASLPLITFVICCIMSFVVYKV
SALVFRDHTRNMLAFSSGSSSMGFFGLPVAIALFDEETVSVYLLCYIGMLFFENSFGFYIVTQRLYSPRQCAKRLILLPA
FHATIAAFLLNYFHVPIPTFLFGIANSMTNSYMVLGTILLGIAIANIKDFAIDFKLIVLTVLIKYVAWPLVILLLIFLDQ
IGPGWYNTQAYQALILLAIIPVSSTGVILASMFNYQPDRAAMILLISTVIGMFYVPLMISLLLHVHP

Sequences:

>Translated_307_residues
MFFTLLSKVLPLYTTILLGFVAGKFIKLDSSTLGKLLFYIIGPSVVFFGIIKTKISPEFASLPLITFVICCIMSFVVYKV
SALVFRDHTRNMLAFSSGSSSMGFFGLPVAIALFDEETVSVYLLCYIGMLFFENSFGFYIVTQRLYSPRQCAKRLILLPA
FHATIAAFLLNYFHVPIPTFLFGIANSMTNSYMVLGTILLGIAIANIKDFAIDFKLIVLTVLIKYVAWPLVILLLIFLDQ
IGPGWYNTQAYQALILLAIIPVSSTGVILASMFNYQPDRAAMILLISTVIGMFYVPLMISLLLHVHP
>Mature_307_residues
MFFTLLSKVLPLYTTILLGFVAGKFIKLDSSTLGKLLFYIIGPSVVFFGIIKTKISPEFASLPLITFVICCIMSFVVYKV
SALVFRDHTRNMLAFSSGSSSMGFFGLPVAIALFDEETVSVYLLCYIGMLFFENSFGFYIVTQRLYSPRQCAKRLILLPA
FHATIAAFLLNYFHVPIPTFLFGIANSMTNSYMVLGTILLGIAIANIKDFAIDFKLIVLTVLIKYVAWPLVILLLIFLDQ
IGPGWYNTQAYQALILLAIIPVSSTGVILASMFNYQPDRAAMILLISTVIGMFYVPLMISLLLHVHP

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34206; Mature: 34206

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFTLLSKVLPLYTTILLGFVAGKFIKLDSSTLGKLLFYIIGPSVVFFGIIKTKISPEFA
CHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
SLPLITFVICCIMSFVVYKVSALVFRDHTRNMLAFSSGSSSMGFFGLPVAIALFDEETVS
HCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHEEEECCHHHH
VYLLCYIGMLFFENSFGFYIVTQRLYSPRQCAKRLILLPAFHATIAAFLLNYFHVPIPTF
HHHHHHHHHHHHCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LFGIANSMTNSYMVLGTILLGIAIANIKDFAIDFKLIVLTVLIKYVAWPLVILLLIFLDQ
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGPGWYNTQAYQALILLAIIPVSSTGVILASMFNYQPDRAAMILLISTVIGMFYVPLMIS
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLLHVHP
HHHHCCC
>Mature Secondary Structure
MFFTLLSKVLPLYTTILLGFVAGKFIKLDSSTLGKLLFYIIGPSVVFFGIIKTKISPEFA
CHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
SLPLITFVICCIMSFVVYKVSALVFRDHTRNMLAFSSGSSSMGFFGLPVAIALFDEETVS
HCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHEEEECCHHHH
VYLLCYIGMLFFENSFGFYIVTQRLYSPRQCAKRLILLPAFHATIAAFLLNYFHVPIPTF
HHHHHHHHHHHHCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LFGIANSMTNSYMVLGTILLGIAIANIKDFAIDFKLIVLTVLIKYVAWPLVILLLIFLDQ
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGPGWYNTQAYQALILLAIIPVSSTGVILASMFNYQPDRAAMILLISTVIGMFYVPLMIS
CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLLHVHP
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA