Click here to switch to the map view.

The map label for this gene is 88606991

Identifier: 88606991

GI number: 88606991

Start: 1019182

End: 1019460

Strand: Reverse

Name: 88606991

Synonym: APH_0956

Alternate gene names: NA

Gene position: 1019460-1019182 (Counterclockwise)

Preceding gene: 88607680

Following gene: 88606818

Centisome position: 69.29

GC content: 41.58

Gene sequence:

>279_bases
ATGCATCCGCTAGCTTACCTAATCGATACATTGTTGAGTGCATATAATTTCGCGCTTATCGCATATGTGCTACTGGGGTG
GCTAATCGCTATGAGGGTAGTAAATAGGGATAATGAATTCGTGTATAGGGCGTATGCGGCGTTATCAAGATTATCCAGGC
CAGCTATTGCTTTGATTCAGAGGTACATTCCAAGCGTTGCAGGTCTGGATTTGTCACCAATGATACTTTTGATTTCTATC
AGCTTTTTTAGGTATGCATTGCGTTACTACTTTGGGTAA

Upstream 100 bases:

>100_bases
TTTCCCAAGCACACAAACAAAAAAGGCAAATTCCATTTTTAATTAATGTGTATTCTTGTATAATGGCATGCTCTGCCACA
GAAGAGGTGATGGATAAATT

Downstream 100 bases:

>100_bases
GTGGATGGGATATTCGAATGAAGTACATAGCAGGATTATTCCGCTTCTGTGTGGTGCTGTCCTTAGTTGTTTTTCTTGAA
GCTTCAGTTATTACGTATAA

Product: YGGT family protein

Products: NA

Alternate protein names: YggT Family Membrane Protein

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MHPLAYLIDTLLSAYNFALIAYVLLGWLIAMRVVNRDNEFVYRAYAALSRLSRPAIALIQRYIPSVAGLDLSPMILLISI
SFFRYALRYYFG

Sequences:

>Translated_92_residues
MHPLAYLIDTLLSAYNFALIAYVLLGWLIAMRVVNRDNEFVYRAYAALSRLSRPAIALIQRYIPSVAGLDLSPMILLISI
SFFRYALRYYFG
>Mature_92_residues
MHPLAYLIDTLLSAYNFALIAYVLLGWLIAMRVVNRDNEFVYRAYAALSRLSRPAIALIQRYIPSVAGLDLSPMILLISI
SFFRYALRYYFG

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10582; Mature: 10582

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPLAYLIDTLLSAYNFALIAYVLLGWLIAMRVVNRDNEFVYRAYAALSRLSRPAIALIQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHH
RYIPSVAGLDLSPMILLISISFFRYALRYYFG
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHPLAYLIDTLLSAYNFALIAYVLLGWLIAMRVVNRDNEFVYRAYAALSRLSRPAIALIQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHH
RYIPSVAGLDLSPMILLISISFFRYALRYYFG
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA