Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87201339

Identifier: 87201339

GI number: 87201339

Start: 3547349

End: 3548014

Strand: Direct

Name: 87201339

Synonym: Saro_3327

Alternate gene names: NA

Gene position: 3547349-3548014 (Clockwise)

Preceding gene: 87201338

Following gene: 87201340

Centisome position: 99.6

GC content: 70.27

Gene sequence:

>666_bases
ATGCGACTACTTGCCCTTGCTTCCGTCATGCTTTCCGCCGCGACTCCGGCGACCGCACAGCCCACACCGCTTACCGAAGC
GCACCGCACCGACCTGCGCTGCGCCGCCGCATTCGCCATCGTCGCCCTCGAACAGTCGGACGGAGATGCGCTGGAGGGCT
GGCCGCCACTTGCCGTCCGCGGCAAGCGCTTCTTCGCGGACACGGGCGAGCGGGTGATGAAGGAGGCCGGGATAAGCCGC
GACGCGGTGCGCGACGCGATCGCCGGAGAAGTGCGCAGCCTCCAGACCGCCGCCGATCCCGACGCCGCGCTCACGGCGCT
GGCCCGGCCATGCCTCGCCCGGCTCGACGCGTCGGTCCCGCCCCTGAAGGTCCCGGACCTGAAGCAGTGCGCGGCCATCA
TGGCGCTCGCCGTCGATGAAGTGCACGCGCGCGAGGGCATGTCGGCGGCGGCGAAGGACCTGAAGACGCTTGCCTCTGTC
CTCGCCTCGCGCGAGCGGGAAGCGCTGGTCGCTGCCGGCCGAAGCGGCGACGAGGCCGACCGCACCCTGGCCGAAGCGCG
CGAGGCAATGGCTGCGGAAGCCGCCGACGGTGCCGGCGGAGTAGACAAGTACGACATCGCCCATTGCTACGACCTGGCGA
AGCCCAACGAGAAATCGCACTATTGA

Upstream 100 bases:

>100_bases
AGCGCGCACCCGGCTGCACCACCCCGCCGCTGCGCAATCCCGTACTGGCCGCGAACAGCCCGCTGTTCGCGGCCATTTTT
TGTCTCTAGCATACGGCCCG

Downstream 100 bases:

>100_bases
GGCAGGCGCAAGCGCTTCCCATATGGGCCCCGAAGGAGAAGCCCCCATGTCCGACCAGCCCGACAAGCTGAACCTTACCG
ACGCCGAATGGCGCGAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRLLALASVMLSAATPATAQPTPLTEAHRTDLRCAAAFAIVALEQSDGDALEGWPPLAVRGKRFFADTGERVMKEAGISR
DAVRDAIAGEVRSLQTAADPDAALTALARPCLARLDASVPPLKVPDLKQCAAIMALAVDEVHAREGMSAAAKDLKTLASV
LASREREALVAAGRSGDEADRTLAEAREAMAAEAADGAGGVDKYDIAHCYDLAKPNEKSHY

Sequences:

>Translated_221_residues
MRLLALASVMLSAATPATAQPTPLTEAHRTDLRCAAAFAIVALEQSDGDALEGWPPLAVRGKRFFADTGERVMKEAGISR
DAVRDAIAGEVRSLQTAADPDAALTALARPCLARLDASVPPLKVPDLKQCAAIMALAVDEVHAREGMSAAAKDLKTLASV
LASREREALVAAGRSGDEADRTLAEAREAMAAEAADGAGGVDKYDIAHCYDLAKPNEKSHY
>Mature_221_residues
MRLLALASVMLSAATPATAQPTPLTEAHRTDLRCAAAFAIVALEQSDGDALEGWPPLAVRGKRFFADTGERVMKEAGISR
DAVRDAIAGEVRSLQTAADPDAALTALARPCLARLDASVPPLKVPDLKQCAAIMALAVDEVHAREGMSAAAKDLKTLASV
LASREREALVAAGRSGDEADRTLAEAREAMAAEAADGAGGVDKYDIAHCYDLAKPNEKSHY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23131; Mature: 23131

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLALASVMLSAATPATAQPTPLTEAHRTDLRCAAAFAIVALEQSDGDALEGWPPLAVR
CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHC
GKRFFADTGERVMKEAGISRDAVRDAIAGEVRSLQTAADPDAALTALARPCLARLDASVP
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
PLKVPDLKQCAAIMALAVDEVHAREGMSAAAKDLKTLASVLASREREALVAAGRSGDEAD
CCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RTLAEAREAMAAEAADGAGGVDKYDIAHCYDLAKPNEKSHY
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRLLALASVMLSAATPATAQPTPLTEAHRTDLRCAAAFAIVALEQSDGDALEGWPPLAVR
CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHC
GKRFFADTGERVMKEAGISRDAVRDAIAGEVRSLQTAADPDAALTALARPCLARLDASVP
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
PLKVPDLKQCAAIMALAVDEVHAREGMSAAAKDLKTLASVLASREREALVAAGRSGDEAD
CCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RTLAEAREAMAAEAADGAGGVDKYDIAHCYDLAKPNEKSHY
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA