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The map label for this gene is msrB [H]

Identifier: 87201340

GI number: 87201340

Start: 3548061

End: 3548468

Strand: Direct

Name: msrB [H]

Synonym: Saro_3328

Alternate gene names: 87201340

Gene position: 3548061-3548468 (Clockwise)

Preceding gene: 87201339

Following gene: 87201341

Centisome position: 99.62

GC content: 65.93

Gene sequence:

>408_bases
ATGTCCGACCAGCCCGACAAGCTGAACCTTACCGACGCCGAATGGCGCGAACGCCTTTCGCCGGAGCAGTACGCGATCCT
GCGCCAGGGCGGGACCGAACGCGCGTTCACCGGGGCCTACGAGAAGAACAAGGCCGAAGGCGACTACCACTGCGCCGGCT
GCGGTGCGCCGCTTTTCGCCTCGGACACCAAATACGACAGCGGTTCGGGCTGGCCGAGCTTCTATGCCCCGGTCGATCCC
GAAGCCGTCGACGAACACCGCGACGTATCGCATGGCATGGTCCGGACCGAAGTGCGCTGTGCCCGCTGTGACGGGCACCT
GGGTCACGTCTTCCCGGACGGTCCGAACCCCACGGGCCTGCGCTACTGCATGAACAGCGCCAGCCTCGACTTCACGCCGA
AAGACTGA

Upstream 100 bases:

>100_bases
GACATCGCCCATTGCTACGACCTGGCGAAGCCCAACGAGAAATCGCACTATTGAGGCAGGCGCAAGCGCTTCCCATATGG
GCCCCGAAGGAGAAGCCCCC

Downstream 100 bases:

>100_bases
GAAGCGCACTTCGGCGATTTGCGGTTAACCCTGCGTTCCGATTGCCCTATGCATTGGGCCGTGACGATGCGCCTGCCTGC
GCCGGATTGAGGAAGCGACA

Product: protein-methionine-S-oxide reductase

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSDQPDKLNLTDAEWRERLSPEQYAILRQGGTERAFTGAYEKNKAEGDYHCAGCGAPLFASDTKYDSGSGWPSFYAPVDP
EAVDEHRDVSHGMVRTEVRCARCDGHLGHVFPDGPNPTGLRYCMNSASLDFTPKD

Sequences:

>Translated_135_residues
MSDQPDKLNLTDAEWRERLSPEQYAILRQGGTERAFTGAYEKNKAEGDYHCAGCGAPLFASDTKYDSGSGWPSFYAPVDP
EAVDEHRDVSHGMVRTEVRCARCDGHLGHVFPDGPNPTGLRYCMNSASLDFTPKD
>Mature_134_residues
SDQPDKLNLTDAEWRERLSPEQYAILRQGGTERAFTGAYEKNKAEGDYHCAGCGAPLFASDTKYDSGSGWPSFYAPVDPE
AVDEHRDVSHGMVRTEVRCARCDGHLGHVFPDGPNPTGLRYCMNSASLDFTPKD

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=129, Percent_Identity=52.7131782945737, Blast_Score=150, Evalue=2e-37,
Organism=Homo sapiens, GI301336162, Length=129, Percent_Identity=52.7131782945737, Blast_Score=150, Evalue=2e-37,
Organism=Homo sapiens, GI73089054, Length=129, Percent_Identity=52.7131782945737, Blast_Score=150, Evalue=2e-37,
Organism=Homo sapiens, GI37620216, Length=129, Percent_Identity=52.7131782945737, Blast_Score=150, Evalue=3e-37,
Organism=Homo sapiens, GI117606353, Length=136, Percent_Identity=47.7941176470588, Blast_Score=139, Evalue=9e-34,
Organism=Escherichia coli, GI1788077, Length=119, Percent_Identity=59.6638655462185, Blast_Score=152, Evalue=6e-39,
Organism=Caenorhabditis elegans, GI17553450, Length=129, Percent_Identity=46.5116279069767, Blast_Score=117, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI115532676, Length=129, Percent_Identity=46.5116279069767, Blast_Score=117, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6319816, Length=137, Percent_Identity=45.2554744525547, Blast_Score=117, Evalue=5e-28,
Organism=Drosophila melanogaster, GI221378664, Length=133, Percent_Identity=51.8796992481203, Blast_Score=149, Evalue=7e-37,
Organism=Drosophila melanogaster, GI45553335, Length=136, Percent_Identity=50.7352941176471, Blast_Score=148, Evalue=9e-37,
Organism=Drosophila melanogaster, GI21356369, Length=136, Percent_Identity=50.7352941176471, Blast_Score=148, Evalue=9e-37,
Organism=Drosophila melanogaster, GI24645799, Length=136, Percent_Identity=50.7352941176471, Blast_Score=148, Evalue=1e-36,
Organism=Drosophila melanogaster, GI221378662, Length=140, Percent_Identity=49.2857142857143, Blast_Score=147, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24645804, Length=147, Percent_Identity=46.9387755102041, Blast_Score=144, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24645801, Length=147, Percent_Identity=46.9387755102041, Blast_Score=144, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 14916; Mature: 14785

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQPDKLNLTDAEWRERLSPEQYAILRQGGTERAFTGAYEKNKAEGDYHCAGCGAPLFA
CCCCCCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
SDTKYDSGSGWPSFYAPVDPEAVDEHRDVSHGMVRTEVRCARCDGHLGHVFPDGPNPTGL
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHEEECCCCCCCCCCCCCCCCCHH
RYCMNSASLDFTPKD
HHHHCCCCCCCCCCC
>Mature Secondary Structure 
SDQPDKLNLTDAEWRERLSPEQYAILRQGGTERAFTGAYEKNKAEGDYHCAGCGAPLFA
CCCCCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
SDTKYDSGSGWPSFYAPVDPEAVDEHRDVSHGMVRTEVRCARCDGHLGHVFPDGPNPTGL
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHEEECCCCCCCCCCCCCCCCCHH
RYCMNSASLDFTPKD
HHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA