Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87201338

Identifier: 87201338

GI number: 87201338

Start: 3546871

End: 3547224

Strand: Direct

Name: 87201338

Synonym: Saro_3326

Alternate gene names: NA

Gene position: 3546871-3547224 (Clockwise)

Preceding gene: 87201336

Following gene: 87201339

Centisome position: 99.59

GC content: 69.77

Gene sequence:

>354_bases
ATGATGACTGCAAACACCTCCGGCGCGCTGCGCCAGCTCCTCCCGGCGATCCTGGCCCTGGTCGGCACCGCCACGAGCTT
CACCGTCACTGCCGGTCCTGCCCGCGCCGCGGTCAACGGCCCGTTCTATTCCGCCACCCTCTCGCGCCCGATGGAGGGCG
AGCAGAAGGTGATCCAGAAGGGCGTGCTGTGGAAGTGCGAAGGCGCTGAATGCTCGGCCCCGCGCGACACCTCGCGTCCG
GCAATCGTGTGCGCCCGCCTTGTCCAGAAGGTCGGCCCGGTGACCCGCTTCGCCACCCCGCAGGGCGATCTCGGCGCCGA
AGACCTGGCCAAGTGCAACGGCGCGGCCGATTGA

Upstream 100 bases:

>100_bases
CAACCTAATACGATAGGTATCGATTCGCAACGGAAATAGCATCCTCTCCAGAACCCCGCAATTTCCGTCGCCCTAAAATG
GAATGTTCAGGGGAAGTACG

Downstream 100 bases:

>100_bases
CGGGCTCCGTCCTCAACGATCTCCAGCGCGCACCCGGCTGCACCACCCCGCCGCTGCGCAATCCCGTACTGGCCGCGAAC
AGCCCGCTGTTCGCGGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MMTANTSGALRQLLPAILALVGTATSFTVTAGPARAAVNGPFYSATLSRPMEGEQKVIQKGVLWKCEGAECSAPRDTSRP
AIVCARLVQKVGPVTRFATPQGDLGAEDLAKCNGAAD

Sequences:

>Translated_117_residues
MMTANTSGALRQLLPAILALVGTATSFTVTAGPARAAVNGPFYSATLSRPMEGEQKVIQKGVLWKCEGAECSAPRDTSRP
AIVCARLVQKVGPVTRFATPQGDLGAEDLAKCNGAAD
>Mature_117_residues
MMTANTSGALRQLLPAILALVGTATSFTVTAGPARAAVNGPFYSATLSRPMEGEQKVIQKGVLWKCEGAECSAPRDTSRP
AIVCARLVQKVGPVTRFATPQGDLGAEDLAKCNGAAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12090; Mature: 12090

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTANTSGALRQLLPAILALVGTATSFTVTAGPARAAVNGPFYSATLSRPMEGEQKVIQK
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHHC
GVLWKCEGAECSAPRDTSRPAIVCARLVQKVGPVTRFATPQGDLGAEDLAKCNGAAD
CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MMTANTSGALRQLLPAILALVGTATSFTVTAGPARAAVNGPFYSATLSRPMEGEQKVIQK
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHHC
GVLWKCEGAECSAPRDTSRPAIVCARLVQKVGPVTRFATPQGDLGAEDLAKCNGAAD
CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA