| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87201240
Identifier: 87201240
GI number: 87201240
Start: 3447652
End: 3448959
Strand: Reverse
Name: 87201240
Synonym: Saro_3228
Alternate gene names: NA
Gene position: 3448959-3447652 (Counterclockwise)
Preceding gene: 87201243
Following gene: 87201239
Centisome position: 96.84
GC content: 59.63
Gene sequence:
>1308_bases ATGAACGCATCGATTGCATCGCGGGCGCCCTACAGGCCCGCCGCCCGGCCTCGGCCGGTCTCGGCGTTTCGAGCGCTGCT GCCCGCCATCATCTTGTTCTACGCCACCATCATCCCGATGGAGGTGCGCTTCGACATTGCGGACCAGACCTTCTATCCGC CGCGTGTCGCGGGCTTTCTGCTCCTGCCGTGGCTGATAACCAAGTTGGTTGGTGGTGGGTTGAGGTACCGGGCGGTTGAC GGCGTAATGCTGGCAGGCGTCACCTGGATGCTCATCTCGTTCATGGTGTACTATGATCCGATTACCGGACTTCTCCGCTC CGCCCCTCTGGCGTTCGACACTGTCATTCCATATCTCGTGGCGCGTGTTTGCATCAAAAACTTGACCGATCTGCGGCGGT TCTTGATCATAGCCGCGCCGGGAATAGCCATTGCCGGCGGTTCCATGGCGCTGGAAAGCTTTTCTCACGTTCCTTTGGTC AAGCCTGCGGCGGCATCGATTTTCGGGCGGCTTTCGTCCTATGAGAACGGCGTCGCGGTAGGCAGTGCGAAGTTCATCGA GGAAACCCGCCTCGGGCTTCTGCGCGCGTCGGGTCCGTTTTCACACCCTATCCTCGGCGGGATCTACTTGTCGCTTTTCC TCCCGCTCTACATCTACTCCGGGATACGAGGCCTGCCGCGCAAGCTGGGCATCGTGGGGTCCGTCTGTGGCTTCTTCTCG CTAAGCTCCGGCGCGTTTCTGGCGCTTCTCATCGGGCTGGGCATCCTCGTGACCGATTGGGTCCAGAAGAAGGTGCAATT CCTGAACTGGCGCCTGATCATCGGCGCAGGCGTTCTGGTCGCCAGCTTGCTGCATCTTCTTTCGCAGCGAGGGCTTATCC CGGTCCTGATCAGGTATACGCTCGATCCTGCCACCGGGCGCTATCGCCTCTATATCTGGGAATACGGAACCCAATCGGTG GCTAAGCATCCCTTGTTCGGCATCGGGTTCTCGGATTGGGAGCGACTTGCCTGGATGGGGACCAGTGTCGACAATCACTG GCTGCTTCTGGCCATGCGGCATGGCCTGGTCGTGTCCGTCGCGTTCCTGTTCGTCCTTTGCTACGGTATATATCACCTCG CAATATCTGCATCGAAGACGCGCGGGTTCGATCGGAACACCTACATTGGCGTCGCGGCAAGCCTGCTGACTCTGTTGATC ACCGGGTTCACTGTCGCCTTTTTCGGACAGATGGTGACGATGTGCTACTTCTTCCTTGGAATGGCGATCAGCCTGCCGTT CGCGTCATCCGGCAGGCGCGCCATCTAG
Upstream 100 bases:
>100_bases TGTAGGAAAATGGATTCTGCTTGTTGCGATGCGGCATTTCTTCTTGCCGGGTCGGGGTGGGCGGGGCTACCCATGCTGCC TTGCAGGAATTGGCAATAAC
Downstream 100 bases:
>100_bases CTGTTATGCTGAAGTGGGTCTGGCATTGACGACGCAAGATATTCAGCCCCGGGACTATATACCGTCACTGGATGGCTGGC GAGCGGTGTCAATTGCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MNASIASRAPYRPAARPRPVSAFRALLPAIILFYATIIPMEVRFDIADQTFYPPRVAGFLLLPWLITKLVGGGLRYRAVD GVMLAGVTWMLISFMVYYDPITGLLRSAPLAFDTVIPYLVARVCIKNLTDLRRFLIIAAPGIAIAGGSMALESFSHVPLV KPAAASIFGRLSSYENGVAVGSAKFIEETRLGLLRASGPFSHPILGGIYLSLFLPLYIYSGIRGLPRKLGIVGSVCGFFS LSSGAFLALLIGLGILVTDWVQKKVQFLNWRLIIGAGVLVASLLHLLSQRGLIPVLIRYTLDPATGRYRLYIWEYGTQSV AKHPLFGIGFSDWERLAWMGTSVDNHWLLLAMRHGLVVSVAFLFVLCYGIYHLAISASKTRGFDRNTYIGVAASLLTLLI TGFTVAFFGQMVTMCYFFLGMAISLPFASSGRRAI
Sequences:
>Translated_435_residues MNASIASRAPYRPAARPRPVSAFRALLPAIILFYATIIPMEVRFDIADQTFYPPRVAGFLLLPWLITKLVGGGLRYRAVD GVMLAGVTWMLISFMVYYDPITGLLRSAPLAFDTVIPYLVARVCIKNLTDLRRFLIIAAPGIAIAGGSMALESFSHVPLV KPAAASIFGRLSSYENGVAVGSAKFIEETRLGLLRASGPFSHPILGGIYLSLFLPLYIYSGIRGLPRKLGIVGSVCGFFS LSSGAFLALLIGLGILVTDWVQKKVQFLNWRLIIGAGVLVASLLHLLSQRGLIPVLIRYTLDPATGRYRLYIWEYGTQSV AKHPLFGIGFSDWERLAWMGTSVDNHWLLLAMRHGLVVSVAFLFVLCYGIYHLAISASKTRGFDRNTYIGVAASLLTLLI TGFTVAFFGQMVTMCYFFLGMAISLPFASSGRRAI >Mature_435_residues MNASIASRAPYRPAARPRPVSAFRALLPAIILFYATIIPMEVRFDIADQTFYPPRVAGFLLLPWLITKLVGGGLRYRAVD GVMLAGVTWMLISFMVYYDPITGLLRSAPLAFDTVIPYLVARVCIKNLTDLRRFLIIAAPGIAIAGGSMALESFSHVPLV KPAAASIFGRLSSYENGVAVGSAKFIEETRLGLLRASGPFSHPILGGIYLSLFLPLYIYSGIRGLPRKLGIVGSVCGFFS LSSGAFLALLIGLGILVTDWVQKKVQFLNWRLIIGAGVLVASLLHLLSQRGLIPVLIRYTLDPATGRYRLYIWEYGTQSV AKHPLFGIGFSDWERLAWMGTSVDNHWLLLAMRHGLVVSVAFLFVLCYGIYHLAISASKTRGFDRNTYIGVAASLLTLLI TGFTVAFFGQMVTMCYFFLGMAISLPFASSGRRAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47634; Mature: 47634
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: PS00079 MULTICOPPER_OXIDASE1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASIASRAPYRPAARPRPVSAFRALLPAIILFYATIIPMEVRFDIADQTFYPPRVAGFL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHHHH LLPWLITKLVGGGLRYRAVDGVMLAGVTWMLISFMVYYDPITGLLRSAPLAFDTVIPYLV HHHHHHHHHHCCCCEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ARVCIKNLTDLRRFLIIAAPGIAIAGGSMALESFSHVPLVKPAAASIFGRLSSYENGVAV HHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEC GSAKFIEETRLGLLRASGPFSHPILGGIYLSLFLPLYIYSGIRGLPRKLGIVGSVCGFFS CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LSSGAFLALLIGLGILVTDWVQKKVQFLNWRLIIGAGVLVASLLHLLSQRGLIPVLIRYT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE LDPATGRYRLYIWEYGTQSVAKHPLFGIGFSDWERLAWMGTSVDNHWLLLAMRHGLVVSV ECCCCCEEEEEEEECCCHHHHCCCCEECCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHH AFLFVLCYGIYHLAISASKTRGFDRNTYIGVAASLLTLLITGFTVAFFGQMVTMCYFFLG HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAISLPFASSGRRAI HHHCCCCCCCCCCCC >Mature Secondary Structure MNASIASRAPYRPAARPRPVSAFRALLPAIILFYATIIPMEVRFDIADQTFYPPRVAGFL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCHHHHHHH LLPWLITKLVGGGLRYRAVDGVMLAGVTWMLISFMVYYDPITGLLRSAPLAFDTVIPYLV HHHHHHHHHHCCCCEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ARVCIKNLTDLRRFLIIAAPGIAIAGGSMALESFSHVPLVKPAAASIFGRLSSYENGVAV HHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEC GSAKFIEETRLGLLRASGPFSHPILGGIYLSLFLPLYIYSGIRGLPRKLGIVGSVCGFFS CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LSSGAFLALLIGLGILVTDWVQKKVQFLNWRLIIGAGVLVASLLHLLSQRGLIPVLIRYT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE LDPATGRYRLYIWEYGTQSVAKHPLFGIGFSDWERLAWMGTSVDNHWLLLAMRHGLVVSV ECCCCCEEEEEEEECCCHHHHCCCCEECCHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHH AFLFVLCYGIYHLAISASKTRGFDRNTYIGVAASLLTLLITGFTVAFFGQMVTMCYFFLG HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAISLPFASSGRRAI HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA