| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87201239
Identifier: 87201239
GI number: 87201239
Start: 3446520
End: 3447626
Strand: Reverse
Name: 87201239
Synonym: Saro_3227
Alternate gene names: NA
Gene position: 3447626-3446520 (Counterclockwise)
Preceding gene: 87201240
Following gene: 87201238
Centisome position: 96.8
GC content: 55.37
Gene sequence:
>1107_bases TTGACGACGCAAGATATTCAGCCCCGGGACTATATACCGTCACTGGATGGCTGGCGAGCGGTGTCAATTGCCATCGTTTT CCTGGCACATGCGTTTCACTCACTCCCGGTTCCGGGCGGGTTTGGGGTCACGGTATTTTTCTTCATCTCTGGCTACCTCA TCACGACGCTTCTCGTGAGAGAGTATGCAAAGTCGGGGACGATTTCGTTCTTGAGTTTCTACATTCGCCGCTTCTTCCGG CTAGCCCCGCCGCTGCTGCTCACGATGACACTCGCCATTGGGTTGGTTCTCGCCGGACGAGCCGAGGGAACGCTGTCTCC GGTCGGGCTGGCGAGCCAGGTATTCTTCTTCTTTAACTATTGGGATGCGACTGCGCGGCAAGCCGACGTGATTTCTGGCA CCAAGATATTTTGGTCCCTTTCGGTAGAAGAGCACTTCTATTTTATTTTCCCGGCAACGATGCTGCTCATCCTGAAAAGG AAGGCGTCTCCTGCTGTCCTTGCAGCAGTCGCGCTGGTCGCAGTTTTCTGGCGCATCGTGAAGTTTTCGGTTCTCGGCTT CGACGAGTGGCAAATCTACGCGCTTACCGACACCCGCTTTGACTCGATGCTCTGGGGCAGTTTCCTTGCAGTAATGATGG AAAAGAGGCCCGACCTTCTGCAGGGCATTCCCCGCCGGGCCATTGCAGTGGCGGCTCTTGGCGGAGGGGCGCTTATCCTC CTCACCTTCGTGGTGCGGGACGAGTTTTTCCGGTCAACGTTCAGATACACGGTACAAGGCGTTTCCCTTGTTCCGATATT CTACTACTCTTTGGTATACCCCGGAACCTTGGCTTACAGGGTACTGAACTCAAAGATCGCCAGACAGATCGGCGTCTATT CCTACACGTTCTACTTGTGCCACTATATCATTTTGAACGCTCTCATATTCAACGGATTGGTTGAGCGCGAGCTTGTCGCA GCAGTCTGGGCTGGGTCCCTTGCGCTGGCATATTCAGCCCTGATGTATCATTTTGTCGAGCTACCCGTGCGGCATTGGAG AAGCGGTTTGTTGACGACGCTTGCCCGGTCACGCACATCCGCCCGCGAGGCGGAGGCCCGCCCATGA
Upstream 100 bases:
>100_bases GTGACGATGTGCTACTTCTTCCTTGGAATGGCGATCAGCCTGCCGTTCGCGTCATCCGGCAGGCGCGCCATCTAGCTGTT ATGCTGAAGTGGGTCTGGCA
Downstream 100 bases:
>100_bases CCGACGTAACGTACAGTGCCGTATCACCGGAAGTCACGGTCATCGTGGTCAGCTACAACACGCGCGACCTTACGCTGCGT GCGCTGGAAACGCTGTTTGC
Product: acyltransferase 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MTTQDIQPRDYIPSLDGWRAVSIAIVFLAHAFHSLPVPGGFGVTVFFFISGYLITTLLVREYAKSGTISFLSFYIRRFFR LAPPLLLTMTLAIGLVLAGRAEGTLSPVGLASQVFFFFNYWDATARQADVISGTKIFWSLSVEEHFYFIFPATMLLILKR KASPAVLAAVALVAVFWRIVKFSVLGFDEWQIYALTDTRFDSMLWGSFLAVMMEKRPDLLQGIPRRAIAVAALGGGALIL LTFVVRDEFFRSTFRYTVQGVSLVPIFYYSLVYPGTLAYRVLNSKIARQIGVYSYTFYLCHYIILNALIFNGLVERELVA AVWAGSLALAYSALMYHFVELPVRHWRSGLLTTLARSRTSAREAEARP
Sequences:
>Translated_368_residues MTTQDIQPRDYIPSLDGWRAVSIAIVFLAHAFHSLPVPGGFGVTVFFFISGYLITTLLVREYAKSGTISFLSFYIRRFFR LAPPLLLTMTLAIGLVLAGRAEGTLSPVGLASQVFFFFNYWDATARQADVISGTKIFWSLSVEEHFYFIFPATMLLILKR KASPAVLAAVALVAVFWRIVKFSVLGFDEWQIYALTDTRFDSMLWGSFLAVMMEKRPDLLQGIPRRAIAVAALGGGALIL LTFVVRDEFFRSTFRYTVQGVSLVPIFYYSLVYPGTLAYRVLNSKIARQIGVYSYTFYLCHYIILNALIFNGLVERELVA AVWAGSLALAYSALMYHFVELPVRHWRSGLLTTLARSRTSAREAEARP >Mature_367_residues TTQDIQPRDYIPSLDGWRAVSIAIVFLAHAFHSLPVPGGFGVTVFFFISGYLITTLLVREYAKSGTISFLSFYIRRFFRL APPLLLTMTLAIGLVLAGRAEGTLSPVGLASQVFFFFNYWDATARQADVISGTKIFWSLSVEEHFYFIFPATMLLILKRK ASPAVLAAVALVAVFWRIVKFSVLGFDEWQIYALTDTRFDSMLWGSFLAVMMEKRPDLLQGIPRRAIAVAALGGGALILL TFVVRDEFFRSTFRYTVQGVSLVPIFYYSLVYPGTLAYRVLNSKIARQIGVYSYTFYLCHYIILNALIFNGLVERELVAA VWAGSLALAYSALMYHFVELPVRHWRSGLLTTLARSRTSAREAEARP
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
Organism=Caenorhabditis elegans, GI17562856, Length=358, Percent_Identity=27.0949720670391, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 - InterPro: IPR013830 - InterPro: IPR013831 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 41412; Mature: 41281
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQDIQPRDYIPSLDGWRAVSIAIVFLAHAFHSLPVPGGFGVTVFFFISGYLITTLLVR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH EYAKSGTISFLSFYIRRFFRLAPPLLLTMTLAIGLVLAGRAEGTLSPVGLASQVFFFFNY HHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH WDATARQADVISGTKIFWSLSVEEHFYFIFPATMLLILKRKASPAVLAAVALVAVFWRIV HHHHCCHHHHCCCCEEEEEEEHHHCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KFSVLGFDEWQIYALTDTRFDSMLWGSFLAVMMEKRPDLLQGIPRRAIAVAALGGGALIL HHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHEEEEECCCCHHHH LTFVVRDEFFRSTFRYTVQGVSLVPIFYYSLVYPGTLAYRVLNSKIARQIGVYSYTFYLC HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH HYIILNALIFNGLVERELVAAVWAGSLALAYSALMYHFVELPVRHWRSGLLTTLARSRTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AREAEARP HHHCCCCC >Mature Secondary Structure TTQDIQPRDYIPSLDGWRAVSIAIVFLAHAFHSLPVPGGFGVTVFFFISGYLITTLLVR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH EYAKSGTISFLSFYIRRFFRLAPPLLLTMTLAIGLVLAGRAEGTLSPVGLASQVFFFFNY HHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH WDATARQADVISGTKIFWSLSVEEHFYFIFPATMLLILKRKASPAVLAAVALVAVFWRIV HHHHCCHHHHCCCCEEEEEEEHHHCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KFSVLGFDEWQIYALTDTRFDSMLWGSFLAVMMEKRPDLLQGIPRRAIAVAALGGGALIL HHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHEEEEECCCCHHHH LTFVVRDEFFRSTFRYTVQGVSLVPIFYYSLVYPGTLAYRVLNSKIARQIGVYSYTFYLC HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH HYIILNALIFNGLVERELVAAVWAGSLALAYSALMYHFVELPVRHWRSGLLTTLARSRTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AREAEARP HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA