| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is yibF [C]
Identifier: 87201092
GI number: 87201092
Start: 3298573
End: 3299244
Strand: Direct
Name: yibF [C]
Synonym: Saro_3080
Alternate gene names: 87201092
Gene position: 3298573-3299244 (Clockwise)
Preceding gene: 87201087
Following gene: 87201097
Centisome position: 92.62
GC content: 64.58
Gene sequence:
>672_bases ATGTGGCAGCTCTATCAATTCCCCCTGTGCCCGTTCAGCCGCAAGGTGCGTCTCCTGCTCAGCGAGAAGGGCGTCGCCTA TGATCTCGTGCGCGAAAACCCGTGGGAGCGGCGCGAGGGCTTTGGGCACCTCAGCCCCGCTTATCGGACGCCAGCGATCC ACAATCCCGAGCGGGGCATCACCTTGGCCGACAGCCGGGCGATCTGCGAATACTTCGAGGAGACGGTCGACAAGACGCCG ATGATCAACGGCACGGCAGCCAACCGCGCCGAAATCCGCCGTCTCGTCGCCCTGTTCGACGAAAGCTTCTTCGCCGACGT CACCAGCCCGCTTCTGGAAGAGCGCATGAAGAAGCGTCTCGTCTATCGTTCGCCGCCTGACAGCAAGCTCCTGCGCGAGG CGATGCGGCTGGCCGACGAGCATCTCTACTACATCGACTACCTGATCGATAACCGCCCCTGGCTCGCGGGCTCGACCATG AGCCTGGCAGACCTCGCCGCCGCCGCCCAGATCTCGGTCGCGGACTACCTGGGCGGCATCGACTGGTCGGGCCATGAACA GGCGCGCGGATGGTATTCCGTCTTCAAGAGCCGCCCCAGCTTCCGCCCTCTTCTGGGCGAGCGCATGGACGTGATCCAGC CGCCCTCCCACTATGCCGACGTGAACGCCTGA
Upstream 100 bases:
>100_bases CTCCTTCCTTGCACCTGGCCGTTTTGTTTCAAACCTCGATGGTGCCCTGTATGAGTTTACGGCCTAGACTTCGCTCCCGT CCCCGCGCAAAGCTCGTTCC
Downstream 100 bases:
>100_bases GGCGCTTTTCGCACGGCTCGCCGGCGCCGAAGATTTCATGCCTGCGAAAAAGCGCTGTCCTACAAGGTCTTGCCCGGCCT AGCCTCCCGGACCATGGAAT
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase Domain; Unkown Function; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase C-Terminal Domain Protein; Glutathione S- Transferase N-Terminal
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MWQLYQFPLCPFSRKVRLLLSEKGVAYDLVRENPWERREGFGHLSPAYRTPAIHNPERGITLADSRAICEYFEETVDKTP MINGTAANRAEIRRLVALFDESFFADVTSPLLEERMKKRLVYRSPPDSKLLREAMRLADEHLYYIDYLIDNRPWLAGSTM SLADLAAAAQISVADYLGGIDWSGHEQARGWYSVFKSRPSFRPLLGERMDVIQPPSHYADVNA
Sequences:
>Translated_223_residues MWQLYQFPLCPFSRKVRLLLSEKGVAYDLVRENPWERREGFGHLSPAYRTPAIHNPERGITLADSRAICEYFEETVDKTP MINGTAANRAEIRRLVALFDESFFADVTSPLLEERMKKRLVYRSPPDSKLLREAMRLADEHLYYIDYLIDNRPWLAGSTM SLADLAAAAQISVADYLGGIDWSGHEQARGWYSVFKSRPSFRPLLGERMDVIQPPSHYADVNA >Mature_223_residues MWQLYQFPLCPFSRKVRLLLSEKGVAYDLVRENPWERREGFGHLSPAYRTPAIHNPERGITLADSRAICEYFEETVDKTP MINGTAANRAEIRRLVALFDESFFADVTSPLLEERMKKRLVYRSPPDSKLLREAMRLADEHLYYIDYLIDNRPWLAGSTM SLADLAAAAQISVADYLGGIDWSGHEQARGWYSVFKSRPSFRPLLGERMDVIQPPSHYADVNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25614; Mature: 25614
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQLYQFPLCPFSRKVRLLLSEKGVAYDLVRENPWERREGFGHLSPAYRTPAIHNPERGI CCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCE TLADSRAICEYFEETVDKTPMINGTAANRAEIRRLVALFDESFFADVTSPLLEERMKKRL EECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VYRSPPDSKLLREAMRLADEHLYYIDYLIDNRPWLAGSTMSLADLAAAAQISVADYLGGI CCCCCCCHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC DWSGHEQARGWYSVFKSRPSFRPLLGERMDVIQPPSHYADVNA CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MWQLYQFPLCPFSRKVRLLLSEKGVAYDLVRENPWERREGFGHLSPAYRTPAIHNPERGI CCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCE TLADSRAICEYFEETVDKTPMINGTAANRAEIRRLVALFDESFFADVTSPLLEERMKKRL EECCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VYRSPPDSKLLREAMRLADEHLYYIDYLIDNRPWLAGSTMSLADLAAAAQISVADYLGGI CCCCCCCHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC DWSGHEQARGWYSVFKSRPSFRPLLGERMDVIQPPSHYADVNA CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA