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The map label for this gene is cirA [C]

Identifier: 87201087

GI number: 87201087

Start: 3294076

End: 3296196

Strand: Direct

Name: cirA [C]

Synonym: Saro_3075

Alternate gene names: 87201087

Gene position: 3294076-3296196 (Clockwise)

Preceding gene: 87201082

Following gene: 87201092

Centisome position: 92.49

GC content: 67.28

Gene sequence:

>2121_bases
ATGAAGTTTCCAAAGAAACGATTGCGGCGCACCGGGAGATGCGCCCTCCTCGCCGCCACGGGCTTCCTCGCCCTCGGCAC
GGCCCCCGCCCGGGCGGCAGAGCCTGCTCCACTCCCGGATAGCCCCGCGCCTGCCAACACTACCGCGCAGGCCGTCTTCA
CCCCGGCCGACTTCACCCGCTTCGCCCCGCGCAACGCGCTCGACATGCTGCGCCAGGTCCCCGGCTTCTCGATCCGCGAG
GGCGAGGAAGCCCGCGGCCTCGGCCAGGCCAGCGGCAACGTCCTGGTCAATTCGCAGCGCCTCTCGTCAAAGTCCGACGA
CATCTACACCCAGCTTTCACGCATCCCGGCCTCCACCGTCGAGCGGATCGAGCTGGTCGACGGCGCCCGCCTCGACATCC
CGGGCCTCACCGGCCAGGTCGCCAACGTCATTGCGCGCAGCTCCAGCTTCTCCGGACAGTTCCGCTGGAGCCCGGAAGTC
CGCCCCCACTATGCCGACCCGCGCTTCACCAACGGCGAAATCTCGATTTCCGGCCGCAAGGGACCGGTCGAATACACGGT
CAGCCTCATCAACAACGCCAACCGCGGCGCCGCCGGCGGCCCCACGCTGATCACCGACCGCACAGGCGCCGTGATCCAGA
CCCGCGACGACGTGGTAAAGGCCCGCCGCGACACGCCCAAGCTCACCGCACGGTTCACCATCGACGGCCCCGGCTCCTCG
GTGGCCAATCTCAACGGCTCGTTCGAACGCATTCCCCGCCGCTTCACCGAGCATTCGGTGCGCACCGATGCCGACGGCAC
GGTCACCATCCGCGATCTCGACGACCGCTCTTCGGCCCGCAACTGGGAAATCGGCGGCGACTACGAATTCGCGCTCGGCC
CCGGCCGGCTCAAGCTCATCGGCCTCAACCGGCAGGAACACGAACCCTACAGCCAGTCGGTCGTCACCACCTTCCGCGAT
GGCACGCCCGCCGTGGGCGACCGCTACGCGCAGGTCGGCGACAGCGCCGAACGCATCGCGCGGGCCGAATATTCCTGGAA
GATGCTGGGCGGCGACTGGCAGCTTGCCGGCGAGGGTGCGTTCAATTCGCTCGACAACGTCGCCTCGCTCGCCACGCTCG
ATGCCCAGGGCCACTTCGTCGAGGTGCCCTTCCCCGAAGGCACCGGCGGCGTGAAGGAAGATCGCTACGACGCCAGCCTC
TCGTTCAGTCGCCCGCTGACCGACCGCCTCACGCTCCAGCTCATTGCCGGCGCCGAACGCTCGACCCTGCGCCAGACGGG
TGCCACCGGGCCCGAAGGCAACCTCAGCCGCACCTTCTTCCGCCCCAAGGGCTCGCTCTCGCTCGGCTGGAAGGCGGGCA
GGAATCTCGACGTCTCGTTCAAGATCAAGCGATCGGTCGGCCAGCTCTCGTTCTACGACTTCCTCGCCCGCCGCTTTCTC
GACGATGGCAACGCCAACAGCGGCAATGCCGATCTGGTCCCCCAGCAGGACTGGTCGGCCGAACTCGAACTGAACCGCAC
GTTCGGCGCGCTCGGCTCGACCAAGCTGCGCCTCGTCGCCCGCGATGTGCAGGATTACGTGACCGTGATCCCTATCGGGG
CGCTTGGGGAATCCATCGGCAATGTCGGCTCGGCCCGCGAACGCCAGATCGTCAGCAACACCACGCTCCAGCTCGATCCT
CTCGGCTGGAAGGGCGCGCGGATCGACCTCAATGTCGAACTGACCTTCACCCGGCTCAGAGACCCGTTCGATCCCTCGCG
CCACATCCCCTACGGCGCCATCACCGAACGCTACTGGGAACTGAACTTCCGCGAAGACTTCCCCGGCACGGACTGGGCCG
CCGGCGCATCGTACGAATACAACCGCCAATCGCTCTATCATCGCCGCTTCGAAGCCGGGCGCGCCTATGAAGGCCCGGTC
TTCGCGGGCCTCTTCATCGAACACAAGAACGTCATGGGCCTGACCGTGAAGGCCAGCGCCAACAACCTCCTGAACGGTCG
CCAGCGCTGGGACCGCCGCGTCTACGACGGCCCTCGGCCGGATGCGCCCATCGCCTTTGTCGAAACGCGCGACCGGCTGA
TCGGCCCGATCTTCACGCTGACCGTAAAGGGCAGCATCTGA

Upstream 100 bases:

>100_bases
CGAACCACAGGATTCATCGACAGACGGCCTTTGTCGGGCCGCGCATGTCGTTGGTCGAGCGCGGCGGGCATGTCCCGCCG
TTCTCGGTCATCGGCTCCGA

Downstream 100 bases:

>100_bases
CCGACCAGGAGATGGGTCTTGCGCGGATTCAGATGTAGCTTGCGCCTGCGGCGCGCTGGAACGGGAAGCGCTTGACGCGT
CCCTCGATCAGCGACTTGCG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Receptor Plug Domain Protein; Nb-Dependent Receptor Plug

Number of amino acids: Translated: 706; Mature: 706

Protein sequence:

>706_residues
MKFPKKRLRRTGRCALLAATGFLALGTAPARAAEPAPLPDSPAPANTTAQAVFTPADFTRFAPRNALDMLRQVPGFSIRE
GEEARGLGQASGNVLVNSQRLSSKSDDIYTQLSRIPASTVERIELVDGARLDIPGLTGQVANVIARSSSFSGQFRWSPEV
RPHYADPRFTNGEISISGRKGPVEYTVSLINNANRGAAGGPTLITDRTGAVIQTRDDVVKARRDTPKLTARFTIDGPGSS
VANLNGSFERIPRRFTEHSVRTDADGTVTIRDLDDRSSARNWEIGGDYEFALGPGRLKLIGLNRQEHEPYSQSVVTTFRD
GTPAVGDRYAQVGDSAERIARAEYSWKMLGGDWQLAGEGAFNSLDNVASLATLDAQGHFVEVPFPEGTGGVKEDRYDASL
SFSRPLTDRLTLQLIAGAERSTLRQTGATGPEGNLSRTFFRPKGSLSLGWKAGRNLDVSFKIKRSVGQLSFYDFLARRFL
DDGNANSGNADLVPQQDWSAELELNRTFGALGSTKLRLVARDVQDYVTVIPIGALGESIGNVGSARERQIVSNTTLQLDP
LGWKGARIDLNVELTFTRLRDPFDPSRHIPYGAITERYWELNFREDFPGTDWAAGASYEYNRQSLYHRRFEAGRAYEGPV
FAGLFIEHKNVMGLTVKASANNLLNGRQRWDRRVYDGPRPDAPIAFVETRDRLIGPIFTLTVKGSI

Sequences:

>Translated_706_residues
MKFPKKRLRRTGRCALLAATGFLALGTAPARAAEPAPLPDSPAPANTTAQAVFTPADFTRFAPRNALDMLRQVPGFSIRE
GEEARGLGQASGNVLVNSQRLSSKSDDIYTQLSRIPASTVERIELVDGARLDIPGLTGQVANVIARSSSFSGQFRWSPEV
RPHYADPRFTNGEISISGRKGPVEYTVSLINNANRGAAGGPTLITDRTGAVIQTRDDVVKARRDTPKLTARFTIDGPGSS
VANLNGSFERIPRRFTEHSVRTDADGTVTIRDLDDRSSARNWEIGGDYEFALGPGRLKLIGLNRQEHEPYSQSVVTTFRD
GTPAVGDRYAQVGDSAERIARAEYSWKMLGGDWQLAGEGAFNSLDNVASLATLDAQGHFVEVPFPEGTGGVKEDRYDASL
SFSRPLTDRLTLQLIAGAERSTLRQTGATGPEGNLSRTFFRPKGSLSLGWKAGRNLDVSFKIKRSVGQLSFYDFLARRFL
DDGNANSGNADLVPQQDWSAELELNRTFGALGSTKLRLVARDVQDYVTVIPIGALGESIGNVGSARERQIVSNTTLQLDP
LGWKGARIDLNVELTFTRLRDPFDPSRHIPYGAITERYWELNFREDFPGTDWAAGASYEYNRQSLYHRRFEAGRAYEGPV
FAGLFIEHKNVMGLTVKASANNLLNGRQRWDRRVYDGPRPDAPIAFVETRDRLIGPIFTLTVKGSI
>Mature_706_residues
MKFPKKRLRRTGRCALLAATGFLALGTAPARAAEPAPLPDSPAPANTTAQAVFTPADFTRFAPRNALDMLRQVPGFSIRE
GEEARGLGQASGNVLVNSQRLSSKSDDIYTQLSRIPASTVERIELVDGARLDIPGLTGQVANVIARSSSFSGQFRWSPEV
RPHYADPRFTNGEISISGRKGPVEYTVSLINNANRGAAGGPTLITDRTGAVIQTRDDVVKARRDTPKLTARFTIDGPGSS
VANLNGSFERIPRRFTEHSVRTDADGTVTIRDLDDRSSARNWEIGGDYEFALGPGRLKLIGLNRQEHEPYSQSVVTTFRD
GTPAVGDRYAQVGDSAERIARAEYSWKMLGGDWQLAGEGAFNSLDNVASLATLDAQGHFVEVPFPEGTGGVKEDRYDASL
SFSRPLTDRLTLQLIAGAERSTLRQTGATGPEGNLSRTFFRPKGSLSLGWKAGRNLDVSFKIKRSVGQLSFYDFLARRFL
DDGNANSGNADLVPQQDWSAELELNRTFGALGSTKLRLVARDVQDYVTVIPIGALGESIGNVGSARERQIVSNTTLQLDP
LGWKGARIDLNVELTFTRLRDPFDPSRHIPYGAITERYWELNFREDFPGTDWAAGASYEYNRQSLYHRRFEAGRAYEGPV
FAGLFIEHKNVMGLTVKASANNLLNGRQRWDRRVYDGPRPDAPIAFVETRDRLIGPIFTLTVKGSI

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77489; Mature: 77489

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFPKKRLRRTGRCALLAATGFLALGTAPARAAEPAPLPDSPAPANTTAQAVFTPADFTR
CCCCHHHHHHCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHH
FAPRNALDMLRQVPGFSIREGEEARGLGQASGNVLVNSQRLSSKSDDIYTQLSRIPASTV
CCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEEHHHCCCCCHHHHHHHHHCCHHHH
ERIELVDGARLDIPGLTGQVANVIARSSSFSGQFRWSPEVRPHYADPRFTNGEISISGRK
HHHHHCCCCEECCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCC
GPVEYTVSLINNANRGAAGGPTLITDRTGAVIQTRDDVVKARRDTPKLTARFTIDGPGSS
CCCEEEEEECCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHHCCCCCEEEEEEECCCCCC
VANLNGSFERIPRRFTEHSVRTDADGTVTIRDLDDRSSARNWEIGGDYEFALGPGRLKLI
EECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEE
GLNRQEHEPYSQSVVTTFRDGTPAVGDRYAQVGDSAERIARAEYSWKMLGGDWQLAGEGA
ECCCCCCCCHHHHHHEEECCCCCCCCCHHHHCCCHHHHHHHHCCEEEEECCCEEEECCCC
FNSLDNVASLATLDAQGHFVEVPFPEGTGGVKEDRYDASLSFSRPLTDRLTLQLIAGAER
CCHHHHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCHHEEEEEECCCCH
STLRQTGATGPEGNLSRTFFRPKGSLSLGWKAGRNLDVSFKIKRSVGQLSFYDFLARRFL
HHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
DDGNANSGNADLVPQQDWSAELELNRTFGALGSTKLRLVARDVQDYVTVIPIGALGESIG
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEHHHHHHHEEEEEHHHHHHHHC
NVGSARERQIVSNTTLQLDPLGWKGARIDLNVELTFTRLRDPFDPSRHIPYGAITERYWE
CCCCHHHHHHHCCCEEEECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHEEE
LNFREDFPGTDWAAGASYEYNRQSLYHRRFEAGRAYEGPVFAGLFIEHKNVMGLTVKASA
ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCC
NNLLNGRQRWDRRVYDGPRPDAPIAFVETRDRLIGPIFTLTVKGSI
CCHHCHHHHHHHHCCCCCCCCCCEEEEECCCHHCCEEEEEEEECCC
>Mature Secondary Structure
MKFPKKRLRRTGRCALLAATGFLALGTAPARAAEPAPLPDSPAPANTTAQAVFTPADFTR
CCCCHHHHHHCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHH
FAPRNALDMLRQVPGFSIREGEEARGLGQASGNVLVNSQRLSSKSDDIYTQLSRIPASTV
CCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCEEEEHHHCCCCCHHHHHHHHHCCHHHH
ERIELVDGARLDIPGLTGQVANVIARSSSFSGQFRWSPEVRPHYADPRFTNGEISISGRK
HHHHHCCCCEECCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCC
GPVEYTVSLINNANRGAAGGPTLITDRTGAVIQTRDDVVKARRDTPKLTARFTIDGPGSS
CCCEEEEEECCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHHCCCCCEEEEEEECCCCCC
VANLNGSFERIPRRFTEHSVRTDADGTVTIRDLDDRSSARNWEIGGDYEFALGPGRLKLI
EECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEE
GLNRQEHEPYSQSVVTTFRDGTPAVGDRYAQVGDSAERIARAEYSWKMLGGDWQLAGEGA
ECCCCCCCCHHHHHHEEECCCCCCCCCHHHHCCCHHHHHHHHCCEEEEECCCEEEECCCC
FNSLDNVASLATLDAQGHFVEVPFPEGTGGVKEDRYDASLSFSRPLTDRLTLQLIAGAER
CCHHHHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCHHEEEEEECCCCH
STLRQTGATGPEGNLSRTFFRPKGSLSLGWKAGRNLDVSFKIKRSVGQLSFYDFLARRFL
HHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
DDGNANSGNADLVPQQDWSAELELNRTFGALGSTKLRLVARDVQDYVTVIPIGALGESIG
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEHHHHHHHEEEEEHHHHHHHHC
NVGSARERQIVSNTTLQLDPLGWKGARIDLNVELTFTRLRDPFDPSRHIPYGAITERYWE
CCCCHHHHHHHCCCEEEECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHEEE
LNFREDFPGTDWAAGASYEYNRQSLYHRRFEAGRAYEGPVFAGLFIEHKNVMGLTVKASA
ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCC
NNLLNGRQRWDRRVYDGPRPDAPIAFVETRDRLIGPIFTLTVKGSI
CCHHCHHHHHHHHCCCCCCCCCCEEEEECCCHHCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA