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The map label for this gene is nasE [H]

Identifier: 87200979

GI number: 87200979

Start: 3185309

End: 3185653

Strand: Reverse

Name: nasE [H]

Synonym: Saro_2967

Alternate gene names: 87200979

Gene position: 3185653-3185309 (Counterclockwise)

Preceding gene: 87200980

Following gene: 87200978

Centisome position: 89.44

GC content: 63.77

Gene sequence:

>345_bases
ATGATGATCGGCGAATGGCTCGATATCGGCCCTGTCAGCCAGATTTCCCCGGGCAATGCCCGCACGCTGCCGGTCGTCGG
CGGCGAGGAGATCGCGGTGTTCCATACGCTCGACAACCGCTTCTATGCGCTGGTCAATCGTTGCCCGCACAAGGCGGGCC
CGCTCAGCCAGGGTATCGTCCATGGTTCGGTCGTTACCTGCCCGCTCCATAACTGGAATATCTCGCTCAAGACCGGCGAG
GCGATGGGCGATGACGAGGGCTGCGTGCCCACGATCCCGCTAAAAGTGGACGCGGGCCGCATCTACCTGCTGCGCGAGGC
GGTTCTGGGGAAGAAGGCGGCGTGA

Upstream 100 bases:

>100_bases
AGTTCATGCAGGACGATCCCTGGGCAAAGCGCGCCCGCGGCGCGGACGCGGAACTGCACCAGCACCTGGCCGAGGTGCGC
CCCTTCCAGATGGAGAATGC

Downstream 100 bases:

>100_bases
CGATGAAGGACATCCGCACCACATGCGCCTACTGCGGTGTCGGCTGCGGTATCCGGGCGACGGTGACGGGCGACCGGGCC
GTTTCGATCAAGGGCGACCC

Product: nitrite reductase (NAD(P)H) large subunit, NirD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MMIGEWLDIGPVSQISPGNARTLPVVGGEEIAVFHTLDNRFYALVNRCPHKAGPLSQGIVHGSVVTCPLHNWNISLKTGE
AMGDDEGCVPTIPLKVDAGRIYLLREAVLGKKAA

Sequences:

>Translated_114_residues
MMIGEWLDIGPVSQISPGNARTLPVVGGEEIAVFHTLDNRFYALVNRCPHKAGPLSQGIVHGSVVTCPLHNWNISLKTGE
AMGDDEGCVPTIPLKVDAGRIYLLREAVLGKKAA
>Mature_114_residues
MMIGEWLDIGPVSQISPGNARTLPVVGGEEIAVFHTLDNRFYALVNRCPHKAGPLSQGIVHGSVVTCPLHNWNISLKTGE
AMGDDEGCVPTIPLKVDAGRIYLLREAVLGKKAA

Specific function: Required for nitrite assimilation. Required for activity of the reductase [H]

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012748
- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: =1.7.1.4 [H]

Molecular weight: Translated: 12201; Mature: 12201

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIGEWLDIGPVSQISPGNARTLPVVGGEEIAVFHTLDNRFYALVNRCPHKAGPLSQGIV
CCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCEE
HGSVVTCPLHNWNISLKTGEAMGDDEGCVPTIPLKVDAGRIYLLREAVLGKKAA
CCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEHHHCCCCC
>Mature Secondary Structure
MMIGEWLDIGPVSQISPGNARTLPVVGGEEIAVFHTLDNRFYALVNRCPHKAGPLSQGIV
CCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCEE
HGSVVTCPLHNWNISLKTGEAMGDDEGCVPTIPLKVDAGRIYLLREAVLGKKAA
CCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7868621; 8969502; 9384377 [H]