| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is nasA [H]
Identifier: 87200978
GI number: 87200978
Start: 3182727
End: 3185312
Strand: Reverse
Name: nasA [H]
Synonym: Saro_2966
Alternate gene names: 87200978
Gene position: 3185312-3182727 (Counterclockwise)
Preceding gene: 87200979
Following gene: 87200977
Centisome position: 89.44
GC content: 68.25
Gene sequence:
>2586_bases GTGACGATGAAGGACATCCGCACCACATGCGCCTACTGCGGTGTCGGCTGCGGTATCCGGGCGACGGTGACGGGCGACCG GGCCGTTTCGATCAAGGGCGACCCGGAGCACCCCGCGAACTTCGGGCGCCTGTGCTCGAAGGGGACGCACCTGGGCGAAA CGGTGGGACTTGAGGGGCGGCTGCTTCACCCGATGGTGGATGCAGAGCGCGCAACCTGGAACGAGGCGCTCGATCTTGCG GCGGCGCGGATGCGCGAATGCATCGAGCGCCACGGCCCCGACAGCGTTGCCTTCTACGTTTCGGGACAACTGCTCACCGA GGACTACTACGTCGCCAACAAGCTGATGAAGGGCTTCATCGGCAGCGGCAACATCGACACCAACAGCCGGCTGTGCATGG CCAGCGCGGTGGCGGCTCATAACCGCGCCTTCGGCGAGGACCTGGTGCCATGCACCTACGACGACCTGGAGGCGGCCGAC CTCGTCCTGCTGGTCGGCTCGAACACGGCGTGGTGCCACCCGGTGATCTGGCAGAGGATCGAAGCGGCTCGCTCGGCACG CGGGACAAGGCTGGTCGTGATCGACCCGCGCCGTACGGAGACCGCCGAGCAGGCCGACCTGCACGTCGCGCTCGCGCCCG ACGGCGACATCGCGCTGTTCAACGCCCTTCTGGCCGAGATGCGCGACCGCGATCTTCTGGACGAGGCCTTCATGGCCGAG CGGTGCGCCGTGCCCGAGGGATACGTCGCCGGGCTCGATCCGCGCGGTCACGGGATAGATCCCGCGACGTTCCGCGCGCT TGCAGACCTCGTCGCGGCCAGCCCGCGCATGGTGACACTGTTCAGCCAGGGGGCGAATCAGTCGCGCTGCGGGACCGACA AGGGCAACGCGATCATCAACCTCCACCTTGCGCTTGGCCGGATCAGCCAGACCGGTGCGGGGCCGTTCTCGATCACCGGC CAGCCCAATGCGATGGGCGGACGCGAAGTTGGCGGGCTGGCGAACATGCTTGCGTGTCACCTGGGCTTTTCGTCCGAGGA GCGCGCGGATGCGGCGATCTTCTGGAACGCGCCCAATATCTGCGCAGGGCCGGGGCTGAAGGCGGTGGACCTGTTTCGCG CGGTTCACGATGGCCGCGTGAAGTTCGTTTGGGTCATGGCGACGAACCCGGCGGTGTCGATGCCCGACGCGGGCTTCGTG CGCGAAGCGCTGGCGCGGTGTGAAACGCTGGTCGTCTCCGACGTGATCGCGGATACGGACACGGCGCGCCTCGCGCATAT CCGCCTGCCCGCGCTGGCGTGGGGCGAAAAGGACGGCACCGTCACCAATTCCGAGCGGCGAATCAGCCGCCAGCGCGCGC TGTTCGAGGCACCCGGCCAAGCGCGGGCCGACTGGGCGATCCTGTGCGATTTCGCCGAGCGGATGGGTTGGGGCCGGGCC TTCGCCTTTCCGACCGCTGCCGCGATATTCCGCGAATACGCGGCGATGACCGCCCTTGCCGGCGCGCGGGGCAAGGCGCT CGACCTGTCGCATCTGGCGGGGCTTGGCGACGCTGCCTACGAAGCACTGGAGCCGACGCTGTGGGGCGGGGTGCATCCGA CGGCCCGGACGTTCAGCCACCCTGACGGCAAGGCCCGGCTGGTGGCGGTCGAAGCGCCGGTCGCGGCTCCTGCTGATCCT GAGTTCCCGTTCCGCCTCAACACCGGGCGTTATCGTGACCAGTGGCACACGATGACGCGCACCGGGCTTTCCCCGACGCT GTCGCAGCACCGGCGCGAACCCCTGCTCGAAATCCATCCGGAAGACGCGGCGCTTGCAGGGATCGAGGATGGCGGGCTGG CGAGGCTGGCGACGCGCGTGGGCGCGACGGTTTTCCGAGTCCTGCATTCGACAGCCCAGCGGCGCGGCGATCTGTTCGTG CCGATGCACTGGACCGATGCGATGGCTGGCGAAGGCCGCGCCAACCGCCTGCCGCTTCAGGAAACCGATCCGCTTTCAGG CCAGCCCGGGTTCAAGGACACGCCCGCGCGCGTGGAACCGGTCGTGCCGGAATGGCGCGCGTTCCTGGCGACACGTGATG AGGCCGCGCTTCCATCGCTTTTGTGGTGGAGCCGCGCCAAGGTCGCCAATGGATGGCTCTGCGAACTGGCAGGCAACGGC GCGCCGGATCTGGAAGTGATACTTCCGAAGGGTACGTGGCTTGAAGCGGCGGACATGGTGCGCGGCATGCGCCGGATCAT CGTGCTGGATAAGGCGGGCGGGCTTCTGGCCGCGCTTTATCTGACGCGCAACGGCGAACTTCCGCCCCGGGACTGGGTAG CGGCGCAGATCGGCAACGCCGAGGCATCGGCGCTCGAACTTCTGGCTGGGCGTCCGGCAGTTGCCTTGCCCGATCGCGGG CCCATCGTGTGCGTCTGCCACGGCGTCGGCGTGAACGAGATTGCCGCTGCCGCCTGCGCTGGCGCGATGACGCTCGAAGC GATCGCGGGATGCACCCGCGCCGGATCGAATTGCGGAAGCTGCCGCCCGGCCATCGCCCGGATGCTCGACGAGATGAACC TGGATACACAGGAGGCTGCGGAATGA
Upstream 100 bases:
>100_bases CGATGGGCGATGACGAGGGCTGCGTGCCCACGATCCCGCTAAAAGTGGACGCGGGCCGCATCTACCTGCTGCGCGAGGCG GTTCTGGGGAAGAAGGCGGC
Downstream 100 bases:
>100_bases ACGACTTTCCGGCGGGAATGGTCTGGCTGGTCGGTGCGGGACCCGGCGATCCCGAACTGCTGACGCGCAAGGCCGAACGG CTGATCGGCAGAGCCAGCGT
Product: assimilatory nitrate reductase (NADH) subunit alpha apoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 861; Mature: 860
Protein sequence:
>861_residues MTMKDIRTTCAYCGVGCGIRATVTGDRAVSIKGDPEHPANFGRLCSKGTHLGETVGLEGRLLHPMVDAERATWNEALDLA AARMRECIERHGPDSVAFYVSGQLLTEDYYVANKLMKGFIGSGNIDTNSRLCMASAVAAHNRAFGEDLVPCTYDDLEAAD LVLLVGSNTAWCHPVIWQRIEAARSARGTRLVVIDPRRTETAEQADLHVALAPDGDIALFNALLAEMRDRDLLDEAFMAE RCAVPEGYVAGLDPRGHGIDPATFRALADLVAASPRMVTLFSQGANQSRCGTDKGNAIINLHLALGRISQTGAGPFSITG QPNAMGGREVGGLANMLACHLGFSSEERADAAIFWNAPNICAGPGLKAVDLFRAVHDGRVKFVWVMATNPAVSMPDAGFV REALARCETLVVSDVIADTDTARLAHIRLPALAWGEKDGTVTNSERRISRQRALFEAPGQARADWAILCDFAERMGWGRA FAFPTAAAIFREYAAMTALAGARGKALDLSHLAGLGDAAYEALEPTLWGGVHPTARTFSHPDGKARLVAVEAPVAAPADP EFPFRLNTGRYRDQWHTMTRTGLSPTLSQHRREPLLEIHPEDAALAGIEDGGLARLATRVGATVFRVLHSTAQRRGDLFV PMHWTDAMAGEGRANRLPLQETDPLSGQPGFKDTPARVEPVVPEWRAFLATRDEAALPSLLWWSRAKVANGWLCELAGNG APDLEVILPKGTWLEAADMVRGMRRIIVLDKAGGLLAALYLTRNGELPPRDWVAAQIGNAEASALELLAGRPAVALPDRG PIVCVCHGVGVNEIAAAACAGAMTLEAIAGCTRAGSNCGSCRPAIARMLDEMNLDTQEAAE
Sequences:
>Translated_861_residues MTMKDIRTTCAYCGVGCGIRATVTGDRAVSIKGDPEHPANFGRLCSKGTHLGETVGLEGRLLHPMVDAERATWNEALDLA AARMRECIERHGPDSVAFYVSGQLLTEDYYVANKLMKGFIGSGNIDTNSRLCMASAVAAHNRAFGEDLVPCTYDDLEAAD LVLLVGSNTAWCHPVIWQRIEAARSARGTRLVVIDPRRTETAEQADLHVALAPDGDIALFNALLAEMRDRDLLDEAFMAE RCAVPEGYVAGLDPRGHGIDPATFRALADLVAASPRMVTLFSQGANQSRCGTDKGNAIINLHLALGRISQTGAGPFSITG QPNAMGGREVGGLANMLACHLGFSSEERADAAIFWNAPNICAGPGLKAVDLFRAVHDGRVKFVWVMATNPAVSMPDAGFV REALARCETLVVSDVIADTDTARLAHIRLPALAWGEKDGTVTNSERRISRQRALFEAPGQARADWAILCDFAERMGWGRA FAFPTAAAIFREYAAMTALAGARGKALDLSHLAGLGDAAYEALEPTLWGGVHPTARTFSHPDGKARLVAVEAPVAAPADP EFPFRLNTGRYRDQWHTMTRTGLSPTLSQHRREPLLEIHPEDAALAGIEDGGLARLATRVGATVFRVLHSTAQRRGDLFV PMHWTDAMAGEGRANRLPLQETDPLSGQPGFKDTPARVEPVVPEWRAFLATRDEAALPSLLWWSRAKVANGWLCELAGNG APDLEVILPKGTWLEAADMVRGMRRIIVLDKAGGLLAALYLTRNGELPPRDWVAAQIGNAEASALELLAGRPAVALPDRG PIVCVCHGVGVNEIAAAACAGAMTLEAIAGCTRAGSNCGSCRPAIARMLDEMNLDTQEAAE >Mature_860_residues TMKDIRTTCAYCGVGCGIRATVTGDRAVSIKGDPEHPANFGRLCSKGTHLGETVGLEGRLLHPMVDAERATWNEALDLAA ARMRECIERHGPDSVAFYVSGQLLTEDYYVANKLMKGFIGSGNIDTNSRLCMASAVAAHNRAFGEDLVPCTYDDLEAADL VLLVGSNTAWCHPVIWQRIEAARSARGTRLVVIDPRRTETAEQADLHVALAPDGDIALFNALLAEMRDRDLLDEAFMAER CAVPEGYVAGLDPRGHGIDPATFRALADLVAASPRMVTLFSQGANQSRCGTDKGNAIINLHLALGRISQTGAGPFSITGQ PNAMGGREVGGLANMLACHLGFSSEERADAAIFWNAPNICAGPGLKAVDLFRAVHDGRVKFVWVMATNPAVSMPDAGFVR EALARCETLVVSDVIADTDTARLAHIRLPALAWGEKDGTVTNSERRISRQRALFEAPGQARADWAILCDFAERMGWGRAF AFPTAAAIFREYAAMTALAGARGKALDLSHLAGLGDAAYEALEPTLWGGVHPTARTFSHPDGKARLVAVEAPVAAPADPE FPFRLNTGRYRDQWHTMTRTGLSPTLSQHRREPLLEIHPEDAALAGIEDGGLARLATRVGATVFRVLHSTAQRRGDLFVP MHWTDAMAGEGRANRLPLQETDPLSGQPGFKDTPARVEPVVPEWRAFLATRDEAALPSLLWWSRAKVANGWLCELAGNGA PDLEVILPKGTWLEAADMVRGMRRIIVLDKAGGLLAALYLTRNGELPPRDWVAAQIGNAEASALELLAGRPAVALPDRGP IVCVCHGVGVNEIAAAACAGAMTLEAIAGCTRAGSNCGSCRPAIARMLDEMNLDTQEAAE
Specific function: Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/napA/narB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788534, Length=791, Percent_Identity=28.9506953223767, Blast_Score=281, Evalue=1e-76, Organism=Escherichia coli, GI3868721, Length=729, Percent_Identity=27.1604938271605, Blast_Score=240, Evalue=3e-64, Organism=Escherichia coli, GI3868719, Length=611, Percent_Identity=23.0769230769231, Blast_Score=139, Evalue=7e-34, Organism=Escherichia coli, GI3868720, Length=621, Percent_Identity=22.3832528180354, Blast_Score=134, Evalue=3e-32, Organism=Escherichia coli, GI1787778, Length=696, Percent_Identity=23.4195402298851, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1787870, Length=253, Percent_Identity=24.5059288537549, Blast_Score=75, Evalue=3e-14, Organism=Escherichia coli, GI87081797, Length=253, Percent_Identity=25.6916996047431, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR007419 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 [H]
Pfam domain/function: PF04324 Fer2_BFD; PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.7.99.4 [H]
Molecular weight: Translated: 92202; Mature: 92071
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMKDIRTTCAYCGVGCGIRATVTGDRAVSIKGDPEHPANFGRLCSKGTHLGETVGLEGR CCHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHCCCCCCHHCCCCCE LLHPMVDAERATWNEALDLAAARMRECIERHGPDSVAFYVSGQLLTEDYYVANKLMKGFI EECCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEECHHHHHHHHHHHHHC GSGNIDTNSRLCMASAVAAHNRAFGEDLVPCTYDDLEAADLVLLVGSNTAWCHPVIWQRI CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEECHHHHHHH EAARSARGTRLVVIDPRRTETAEQADLHVALAPDGDIALFNALLAEMRDRDLLDEAFMAE HHHHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH RCAVPEGYVAGLDPRGHGIDPATFRALADLVAASPRMVTLFSQGANQSRCGTDKGNAIIN HHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEE LHLALGRISQTGAGPFSITGQPNAMGGREVGGLANMLACHLGFSSEERADAAIFWNAPNI EEEEECCHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC CAGPGLKAVDLFRAVHDGRVKFVWVMATNPAVSMPDAGFVREALARCETLVVSDVIADTD CCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC TARLAHIRLPALAWGEKDGTVTNSERRISRQRALFEAPGQARADWAILCDFAERMGWGRA CCEEEEEECCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCE FAFPTAAAIFREYAAMTALAGARGKALDLSHLAGLGDAAYEALEPTLWGGVHPTARTFSH EHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHCCCHHHHHHHCCHHCCCCCCCHHCCCC PDGKARLVAVEAPVAAPADPEFPFRLNTGRYRDQWHTMTRTGLSPTLSQHRREPLLEIHP CCCCEEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHCCCCEEECC EDAALAGIEDGGLARLATRVGATVFRVLHSTAQRRGDLFVPMHWTDAMAGEGRANRLPLQ CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC ETDPLSGQPGFKDTPARVEPVVPEWRAFLATRDEAALPSLLWWSRAKVANGWLCELAGNG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHCCHHHHHHHHHHCCCEEEEECCCC APDLEVILPKGTWLEAADMVRGMRRIIVLDKAGGLLAALYLTRNGELPPRDWVAAQIGNA CCCEEEEECCCCCHHHHHHHHHHEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHCCCC EASALELLAGRPAVALPDRGPIVCVCHGVGVNEIAAAACAGAMTLEAIAGCTRAGSNCGS HHHHHHHHCCCCCEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC CRPAIARMLDEMNLDTQEAAE CHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure TMKDIRTTCAYCGVGCGIRATVTGDRAVSIKGDPEHPANFGRLCSKGTHLGETVGLEGR CHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHCCCCCCHHCCCCCE LLHPMVDAERATWNEALDLAAARMRECIERHGPDSVAFYVSGQLLTEDYYVANKLMKGFI EECCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEECHHHHHHHHHHHHHC GSGNIDTNSRLCMASAVAAHNRAFGEDLVPCTYDDLEAADLVLLVGSNTAWCHPVIWQRI CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEECHHHHHHH EAARSARGTRLVVIDPRRTETAEQADLHVALAPDGDIALFNALLAEMRDRDLLDEAFMAE HHHHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH RCAVPEGYVAGLDPRGHGIDPATFRALADLVAASPRMVTLFSQGANQSRCGTDKGNAIIN HHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEE LHLALGRISQTGAGPFSITGQPNAMGGREVGGLANMLACHLGFSSEERADAAIFWNAPNI EEEEECCHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC CAGPGLKAVDLFRAVHDGRVKFVWVMATNPAVSMPDAGFVREALARCETLVVSDVIADTD CCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC TARLAHIRLPALAWGEKDGTVTNSERRISRQRALFEAPGQARADWAILCDFAERMGWGRA CCEEEEEECCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCE FAFPTAAAIFREYAAMTALAGARGKALDLSHLAGLGDAAYEALEPTLWGGVHPTARTFSH EHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHCCCHHHHHHHCCHHCCCCCCCHHCCCC PDGKARLVAVEAPVAAPADPEFPFRLNTGRYRDQWHTMTRTGLSPTLSQHRREPLLEIHP CCCCEEEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHCCCCEEECC EDAALAGIEDGGLARLATRVGATVFRVLHSTAQRRGDLFVPMHWTDAMAGEGRANRLPLQ CCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC ETDPLSGQPGFKDTPARVEPVVPEWRAFLATRDEAALPSLLWWSRAKVANGWLCELAGNG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHCCHHHHHHHHHHCCCEEEEECCCC APDLEVILPKGTWLEAADMVRGMRRIIVLDKAGGLLAALYLTRNGELPPRDWVAAQIGNA CCCEEEEECCCCCHHHHHHHHHHEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHCCCC EASALELLAGRPAVALPDRGPIVCVCHGVGVNEIAAAACAGAMTLEAIAGCTRAGSNCGS HHHHHHHHCCCCCEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC CRPAIARMLDEMNLDTQEAAE CHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8468296 [H]