| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87200917
Identifier: 87200917
GI number: 87200917
Start: 3122043
End: 3122468
Strand: Reverse
Name: 87200917
Synonym: Saro_2905
Alternate gene names: NA
Gene position: 3122468-3122043 (Counterclockwise)
Preceding gene: 87200918
Following gene: 87200916
Centisome position: 87.67
GC content: 68.08
Gene sequence:
>426_bases ATGAGCGTTGTCCGGCAGGCGGGGTGCGTTGCGATCGGCGGGCGGGGGCTGCTCATCGAAGGTGCGCCGGGTACGGGCAA GTCCAGTCTCGCACTGGCACTCATCGACAGGGGCGCGACGCTGGTGGGGGACGATGGCGTGCTGTTGCGCGTGCAGGGCG GACGCTTGATTGCCGCGCCCCACCCGCACATTGCTGGCAAGCTGGAAGTCCGCAACGTCGGCATCGTCGACCTGCCGGTT TCGGCGCCCGTCCCTGTATCCCTGCTGGTCCGGCTGGACGTCGATGCGCCGCGTTTCGTCGGCACGCCGGACGTCATGGA AATCTGCGGCATCGCGCTGCCGCTGGTCAGGCTGTGGCCCGAATCGCCGGTCCTCCATCTCAGGGCGGAAATGGCGCTGT CGGTCCATGGGTTGACGACCTGCTGA
Upstream 100 bases:
>100_bases CCGAAGCTCACGATGGCGCGCTCGTGATCGGCGACCGTCCGGACGGAAAGGCGGGGGCCTACCTCGTGCTCAGCCTTCCC CTGCTCGCGGAAGAAAGCGA
Downstream 100 bases:
>100_bases CGGTGGACAGGTCGTCCTCGCGGACTTTCCAAGCGCGCCACGAAGGCGCAAAGCGATAGCCATGTCCGCGGATTCGGCAC CCCAGCGAATTCTTCTCGTC
Product: HPr kinase
Products: NA
Alternate protein names: Hpr(Ser) Kinase/Phosphatase; HPr Kinase/Phosphorylase
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSVVRQAGCVAIGGRGLLIEGAPGTGKSSLALALIDRGATLVGDDGVLLRVQGGRLIAAPHPHIAGKLEVRNVGIVDLPV SAPVPVSLLVRLDVDAPRFVGTPDVMEICGIALPLVRLWPESPVLHLRAEMALSVHGLTTC
Sequences:
>Translated_141_residues MSVVRQAGCVAIGGRGLLIEGAPGTGKSSLALALIDRGATLVGDDGVLLRVQGGRLIAAPHPHIAGKLEVRNVGIVDLPV SAPVPVSLLVRLDVDAPRFVGTPDVMEICGIALPLVRLWPESPVLHLRAEMALSVHGLTTC >Mature_140_residues SVVRQAGCVAIGGRGLLIEGAPGTGKSSLALALIDRGATLVGDDGVLLRVQGGRLIAAPHPHIAGKLEVRNVGIVDLPVS APVPVSLLVRLDVDAPRFVGTPDVMEICGIALPLVRLWPESPVLHLRAEMALSVHGLTTC
Specific function: Unknown
COG id: COG1493
COG function: function code T; Serine kinase of the HPr protein, regulates carbohydrate metabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14556; Mature: 14425
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVRQAGCVAIGGRGLLIEGAPGTGKSSLALALIDRGATLVGDDGVLLRVQGGRLIAAP CCCCCCCCEEEECCCEEEEECCCCCCCCCEEEEEEECCCEEEECCCEEEEECCCEEEECC HPHIAGKLEVRNVGIVDLPVSAPVPVSLLVRLDVDAPRFVGTPDVMEICGIALPLVRLWP CCCCCCEEEECCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC ESPVLHLRAEMALSVHGLTTC CCCEEEEEEEEEEEEECEECC >Mature Secondary Structure SVVRQAGCVAIGGRGLLIEGAPGTGKSSLALALIDRGATLVGDDGVLLRVQGGRLIAAP CCCCCCCEEEECCCEEEEECCCCCCCCCEEEEEEECCCEEEECCCEEEEECCCEEEECC HPHIAGKLEVRNVGIVDLPVSAPVPVSLLVRLDVDAPRFVGTPDVMEICGIALPLVRLWP CCCCCCEEEECCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC ESPVLHLRAEMALSVHGLTTC CCCEEEEEEEEEEEEECEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA