| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is chvG [H]
Identifier: 87200918
GI number: 87200918
Start: 3122465
End: 3124042
Strand: Reverse
Name: chvG [H]
Synonym: Saro_2906
Alternate gene names: 87200918
Gene position: 3124042-3122465 (Counterclockwise)
Preceding gene: 87200919
Following gene: 87200917
Centisome position: 87.71
GC content: 68.82
Gene sequence:
>1578_bases TTGCCGAGGAGTGACGAGGCCCCGCTTCCCAGGCCCCGGTTGAGGCGTCTGCCGCGTATCCGCGGCGTTTCGCTCACCAC CCGCATCCTTTTCGTCAACGTGATAGCGCTGGCGCTGCTCGCGGGTGGCTTCTTCTATCTCGACAGCTATCGCACCCAGC TTATCGACGAACGCTTCAAGCTCGCCCGGGCCGAAGCCGAGATCGCGGCAGACGCGCTTGACGAAACGCCGATGGCCGAA CGGCGGCGCCTGCTGGTCCGGATCGGGCAGGAGCAGGTGCTGCGCCTGCGGCTCTACGACGCCGAAAGCCGGCTGGAGGC GGACAGCTTCGCGCTTGCCCCGCCGTCGTTCGCGCTCGTCGATCCGGAAAGCGAGCCGTGGTACCAGAAGGCGGCGCGGC TGCTCGACCGGGGCGTGGACTTCATCGTCAATGCGCCCAGTGTCGAGCGTTACAGCGACACCGCCGAACAGCCCGCCGGG CAATGGCCCGAAATTCGCGCCGCGCGGGTATCGGGGCAAACCGAGGTGTTCCTCCGCTATGCGCCAGACCGCACGCCGGT CATCACTGCCGCGACGCCGGTGGGGACGAGGGGCGAAGTCCTGCTCACGCTGCGCAACGCGCTCGACATCACCCAGTCGG TCCGCGATGCCCGCCAGACGCTGGTCATCATCATCGGCATTGCGCTGTTGCTGTCGGTCCAGCTTTCGCTGTTCCTCGCG CGAACGATCGTCCAGCCGCTGCGGGCGCTGGTGCGCGCGGCGGTGCGCGTCCGTCTCGGGCGGGAGCGCGAGGTCGTGGT GCCGCGACTTCCGGATCGCGGCGACGAGATCGGGCTTCTGGCACGCGCGGTGTCGGACATGACGACCGCGCTGCGCCAGC GCATCGACGCGGTCGAGATGTTCGCGGCGGATGTGGCGCACGAACTGAAGAACCCGCTCGCTTCGCTGTCGAGTGCGCTG GAGACGATGGAGCGGGTGGAGGACCCCGCACTTCGCCGCCAGCTCGCGGGGATCGCGGCGCACGACGTGCAGCGCATCGA CCGCCTCATCACCGAAATCGCCGACGCGAGCCGCATCGACGCCGAACTCAGCCGCGCGACCTTCGTCCCGCTGGACGTAG CCGCGCTGGCCTCGCAGGTGGTGGGCGCGCGCGACGTGCGTGCCAATGTCTCGACGCCCATCCGCTTCTCCAATGGCGGT GGCGACACGGTCGTTGCGGGCGATGCCGCGCGGCTGGAGCGCGTGCTGGAGAACCTGCTCGACAATGCGGTGTCCTTTTC GCCACCCGGTGGCGAGGTCGAAGTCGTCGCCTGGGGCGATGGCGAGGCCGCGCACCTTTCGGTGTCCGACGAAGGGCCGG GCATCCCGGCGGGAGAGCGCGACAAGGTATTTGAGCGGTTCCATTCGGTGCGCCCGGAAGAGGAAGCGTTCGGGGCGCAT AGCGGCCTCGGTCTGGCCATCGCGCGGACCATAGCCGAAGCTCACGATGGCGCGCTCGTGATCGGCGACCGTCCGGACGG AAAGGCGGGGGCCTACCTCGTGCTCAGCCTTCCCCTGCTCGCGGAAGAAAGCGAATGA
Upstream 100 bases:
>100_bases CGGACGATAGACAGCCACATCAAGCGCCTGCGCCGCAAGTTCCGCGTGGCCGACCCGGCCTTCGGCGCCATCGAGACGCT ATACGGGGCAGGGTACAGCT
Downstream 100 bases:
>100_bases GCGTTGTCCGGCAGGCGGGGTGCGTTGCGATCGGCGGGCGGGGGCTGCTCATCGAAGGTGCGCCGGGTACGGGCAAGTCC AGTCTCGCACTGGCACTCAT
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 525; Mature: 524
Protein sequence:
>525_residues MPRSDEAPLPRPRLRRLPRIRGVSLTTRILFVNVIALALLAGGFFYLDSYRTQLIDERFKLARAEAEIAADALDETPMAE RRRLLVRIGQEQVLRLRLYDAESRLEADSFALAPPSFALVDPESEPWYQKAARLLDRGVDFIVNAPSVERYSDTAEQPAG QWPEIRAARVSGQTEVFLRYAPDRTPVITAATPVGTRGEVLLTLRNALDITQSVRDARQTLVIIIGIALLLSVQLSLFLA RTIVQPLRALVRAAVRVRLGREREVVVPRLPDRGDEIGLLARAVSDMTTALRQRIDAVEMFAADVAHELKNPLASLSSAL ETMERVEDPALRRQLAGIAAHDVQRIDRLITEIADASRIDAELSRATFVPLDVAALASQVVGARDVRANVSTPIRFSNGG GDTVVAGDAARLERVLENLLDNAVSFSPPGGEVEVVAWGDGEAAHLSVSDEGPGIPAGERDKVFERFHSVRPEEEAFGAH SGLGLAIARTIAEAHDGALVIGDRPDGKAGAYLVLSLPLLAEESE
Sequences:
>Translated_525_residues MPRSDEAPLPRPRLRRLPRIRGVSLTTRILFVNVIALALLAGGFFYLDSYRTQLIDERFKLARAEAEIAADALDETPMAE RRRLLVRIGQEQVLRLRLYDAESRLEADSFALAPPSFALVDPESEPWYQKAARLLDRGVDFIVNAPSVERYSDTAEQPAG QWPEIRAARVSGQTEVFLRYAPDRTPVITAATPVGTRGEVLLTLRNALDITQSVRDARQTLVIIIGIALLLSVQLSLFLA RTIVQPLRALVRAAVRVRLGREREVVVPRLPDRGDEIGLLARAVSDMTTALRQRIDAVEMFAADVAHELKNPLASLSSAL ETMERVEDPALRRQLAGIAAHDVQRIDRLITEIADASRIDAELSRATFVPLDVAALASQVVGARDVRANVSTPIRFSNGG GDTVVAGDAARLERVLENLLDNAVSFSPPGGEVEVVAWGDGEAAHLSVSDEGPGIPAGERDKVFERFHSVRPEEEAFGAH SGLGLAIARTIAEAHDGALVIGDRPDGKAGAYLVLSLPLLAEESE >Mature_524_residues PRSDEAPLPRPRLRRLPRIRGVSLTTRILFVNVIALALLAGGFFYLDSYRTQLIDERFKLARAEAEIAADALDETPMAER RRLLVRIGQEQVLRLRLYDAESRLEADSFALAPPSFALVDPESEPWYQKAARLLDRGVDFIVNAPSVERYSDTAEQPAGQ WPEIRAARVSGQTEVFLRYAPDRTPVITAATPVGTRGEVLLTLRNALDITQSVRDARQTLVIIIGIALLLSVQLSLFLAR TIVQPLRALVRAAVRVRLGREREVVVPRLPDRGDEIGLLARAVSDMTTALRQRIDAVEMFAADVAHELKNPLASLSSALE TMERVEDPALRRQLAGIAAHDVQRIDRLITEIADASRIDAELSRATFVPLDVAALASQVVGARDVRANVSTPIRFSNGGG DTVVAGDAARLERVLENLLDNAVSFSPPGGEVEVVAWGDGEAAHLSVSDEGPGIPAGERDKVFERFHSVRPEEEAFGAHS GLGLAIARTIAEAHDGALVIGDRPDGKAGAYLVLSLPLLAEESE
Specific function: Member of a two-component regulatory system ChvG/ChvI. Activates ChvI by phosphorylation (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=306, Percent_Identity=28.7581699346405, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1790861, Length=294, Percent_Identity=30.6122448979592, Blast_Score=95, Evalue=9e-21, Organism=Escherichia coli, GI1786912, Length=222, Percent_Identity=31.981981981982, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI1788279, Length=282, Percent_Identity=28.3687943262411, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1790436, Length=234, Percent_Identity=29.9145299145299, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1786600, Length=243, Percent_Identity=28.8065843621399, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI145693157, Length=266, Percent_Identity=26.6917293233083, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1790551, Length=241, Percent_Identity=27.3858921161826, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1790346, Length=308, Percent_Identity=27.9220779220779, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1787894, Length=257, Percent_Identity=28.7937743190661, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1787374, Length=300, Percent_Identity=25.6666666666667, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1786783, Length=338, Percent_Identity=24.8520710059172, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1789808, Length=291, Percent_Identity=25.7731958762887, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI48994928, Length=256, Percent_Identity=25.390625, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI87082128, Length=293, Percent_Identity=25.5972696245734, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1789403, Length=210, Percent_Identity=30.4761904761905, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1788549, Length=274, Percent_Identity=24.8175182481752, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 57188; Mature: 57057
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSDEAPLPRPRLRRLPRIRGVSLTTRILFVNVIALALLAGGFFYLDSYRTQLIDERFK CCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LARAEAEIAADALDETPMAERRRLLVRIGQEQVLRLRLYDAESRLEADSFALAPPSFALV HHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHEEEEEEECCHHHCCCCCEEECCCCEEEE DPESEPWYQKAARLLDRGVDFIVNAPSVERYSDTAEQPAGQWPEIRAARVSGQTEVFLRY CCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEEE APDRTPVITAATPVGTRGEVLLTLRNALDITQSVRDARQTLVIIIGIALLLSVQLSLFLA CCCCCCEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTIVQPLRALVRAAVRVRLGREREVVVPRLPDRGDEIGLLARAVSDMTTALRQRIDAVEM HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FAADVAHELKNPLASLSSALETMERVEDPALRRQLAGIAAHDVQRIDRLITEIADASRID HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELSRATFVPLDVAALASQVVGARDVRANVSTPIRFSNGGGDTVVAGDAARLERVLENLL HHHHHHEECCHHHHHHHHHHHCCHHHCCCCCCCEEECCCCCCEEEECCHHHHHHHHHHHH DNAVSFSPPGGEVEVVAWGDGEAAHLSVSDEGPGIPAGERDKVFERFHSVRPEEEAFGAH HHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCC SGLGLAIARTIAEAHDGALVIGDRPDGKAGAYLVLSLPLLAEESE CCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECHHCCCCC >Mature Secondary Structure PRSDEAPLPRPRLRRLPRIRGVSLTTRILFVNVIALALLAGGFFYLDSYRTQLIDERFK CCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LARAEAEIAADALDETPMAERRRLLVRIGQEQVLRLRLYDAESRLEADSFALAPPSFALV HHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHEEEEEEECCHHHCCCCCEEECCCCEEEE DPESEPWYQKAARLLDRGVDFIVNAPSVERYSDTAEQPAGQWPEIRAARVSGQTEVFLRY CCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEEE APDRTPVITAATPVGTRGEVLLTLRNALDITQSVRDARQTLVIIIGIALLLSVQLSLFLA CCCCCCEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTIVQPLRALVRAAVRVRLGREREVVVPRLPDRGDEIGLLARAVSDMTTALRQRIDAVEM HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FAADVAHELKNPLASLSSALETMERVEDPALRRQLAGIAAHDVQRIDRLITEIADASRID HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELSRATFVPLDVAALASQVVGARDVRANVSTPIRFSNGGGDTVVAGDAARLERVLENLL HHHHHHEECCHHHHHHHHHHHCCHHHCCCCCCCEEECCCCCCEEEECCHHHHHHHHHHHH DNAVSFSPPGGEVEVVAWGDGEAAHLSVSDEGPGIPAGERDKVFERFHSVRPEEEAFGAH HHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCC SGLGLAIARTIAEAHDGALVIGDRPDGKAGAYLVLSLPLLAEESE CCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8407839; 11743193; 11743194 [H]