| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is manX [C]
Identifier: 87200915
GI number: 87200915
Start: 3120524
End: 3120928
Strand: Reverse
Name: manX [C]
Synonym: Saro_2903
Alternate gene names: 87200915
Gene position: 3120928-3120524 (Counterclockwise)
Preceding gene: 87200916
Following gene: 87200914
Centisome position: 87.63
GC content: 60.49
Gene sequence:
>405_bases ATGATCGGTCTGATTCTCGTTACCCACGGCGCCCTTGCCGATGAATTCATCCATGCGATGGAGCATGTGGTTGGCCGGCA AAGCGATGTCATCGGCGTCTGCATCGGCCCCAACGACGACATGGAGAAGCGCCGCAAGGAGATTGCCGACGCGATCAAGC GCGTGGACAGCGGCGAAGGCGTTATCATCCTGACCGACCTGTTCGGCGGAACGCCCTCCAACCTCGCGATCTCGCTCATG CAGGCAGGCAAGATCGAAGTCATTGCCGGTATCAACCTGCCCATGCTGATCCGCCTGGCCAAGGCGCGCAACTGCATGGG CGTCAAGGAAGCGACTGCGGCGGCGCGCGACGCCGGACGCAACTACATAACGATCGCTTCCGAATTTCTCGGACAGGATG CATGA
Upstream 100 bases:
>100_bases TCGATACCCAGTCGTCTTGCGTCCCCCGTATTCACGCCAAGCCTGCGTTAAGCCGCGCTTCGGCAGGATACACGGTCGCA CCTCGGAGCCTGTCCCTTTC
Downstream 100 bases:
>100_bases TATGGCGGAACAGGGCGCGCAGCAGGGATACGTCACTCGCGAAACGGTGACGATCGTCAACCAGCGCGGCCTTCATGCCC GGGCCAGCGCGAAGTTCGTG
Product: PTS system fructose subfamily IIA component
Products: protein histidine; sugar phosphate
Alternate protein names: PTS System IIA Component; PTS System Mannose/Fructose/Sorbose Family IIA Subunit; PTS System Fructose IIA Component; PTS System Mannose-Specific IIAB Component; PTS System IIA Component Man Family; PTS System Protein; IIA Component Of Sugar Transport PTS System; Pts System Fructose Subfamily IIa Component; Fructose-Specific IIA Component; PTS System Transporter Subunit IIA; Protein-N P-Phosphohistidine-Sugar Phosphotransferase; PTS System Mannose/Fructose-Specific IIA Component; PTS System IIa Component; PTS Mannose-Specific IIA Component; Pts System Mannose-Specific Eiiab Component; PTS Mannose-Specific IIA Component; PTS System Mannose Subfamily IIA Subunit; PTS System Mannose/Fructose/Sorbose Family IIB Component; Mannose-Specific Phosphotransferase System Component IIAB; Pts System Mannose/Fructose/Sorbose Family IIa Component; Phosphotransferase System Subunit; PTS System Fructose Subfamily Transprotein Subunit IIA; AhaA Protein; Pts System Fructose IIA Component; PTS System Mannose/Fructose-Specific Component IIA; Mannose-Specific PTS System Component IIAB; Phosphotransferase System Fructose Subfamily IIA Component; PTS System Mannose/Fructose/Sorbose Family IIAB Subunit; Mannose-Specific Phosphotransferase System Component IIA; PTS System Mannose-Specific II AB Component; PTS System Mannose-Type Transporter Subunit IIA; Pentitol Phosphotransferase IIA Component; PTS System Component IIA; PTS System Mannose-Specific Transporter Subunit IIAB; Phosphotransferase System IIA Component; PTS System Mannose/Fructose IIA Component; Phosphotransferase Mannose/Fructose-Specific Component IIA; PTS System Mannose/Fructose/Sorbose Family IIA Component; PTS System Mannose-Specific IIAB Components; PTS System Mannose-Specific Transporter Subunit IIA; PTS System Sorbose Subfamily IIB Component; Phosphotransferase System Fructose-Specific IIA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MIGLILVTHGALADEFIHAMEHVVGRQSDVIGVCIGPNDDMEKRRKEIADAIKRVDSGEGVIILTDLFGGTPSNLAISLM QAGKIEVIAGINLPMLIRLAKARNCMGVKEATAAARDAGRNYITIASEFLGQDA
Sequences:
>Translated_134_residues MIGLILVTHGALADEFIHAMEHVVGRQSDVIGVCIGPNDDMEKRRKEIADAIKRVDSGEGVIILTDLFGGTPSNLAISLM QAGKIEVIAGINLPMLIRLAKARNCMGVKEATAAARDAGRNYITIASEFLGQDA >Mature_134_residues MIGLILVTHGALADEFIHAMEHVVGRQSDVIGVCIGPNDDMEKRRKEIADAIKRVDSGEGVIILTDLFGGTPSNLAISLM QAGKIEVIAGINLPMLIRLAKARNCMGVKEATAAARDAGRNYITIASEFLGQDA
Specific function: This Is A Component Of The Phosphoenolpyruvate-Dependent Sugar Phosphotransferase System (Pts), A Major Carbohydrate Active -Transport System. The IIcd Domains Contain The Sugar Binding Site And The Transmembrane Channel; The IIa Domain Contains The Prim
COG id: COG2893
COG function: function code G; Phosphotransferase system, mannose/fructose-specific component IIA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788120, Length=121, Percent_Identity=30.5785123966942, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.69
Molecular weight: Translated: 14257; Mature: 14257
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS51096 PTS_EIIA_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGLILVTHGALADEFIHAMEHVVGRQSDVIGVCIGPNDDMEKRRKEIADAIKRVDSGEG CEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC VIILTDLFGGTPSNLAISLMQAGKIEVIAGINLPMLIRLAKARNCMGVKEATAAARDAGR EEEEEECCCCCCCHHHHHEECCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCC NYITIASEFLGQDA CEEEEEHHHCCCCC >Mature Secondary Structure MIGLILVTHGALADEFIHAMEHVVGRQSDVIGVCIGPNDDMEKRRKEIADAIKRVDSGEG CEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC VIILTDLFGGTPSNLAISLMQAGKIEVIAGINLPMLIRLAKARNCMGVKEATAAARDAGR EEEEEECCCCCCCHHHHHEECCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCC NYITIASEFLGQDA CEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA