| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is ptsO [C]
Identifier: 87200914
GI number: 87200914
Start: 3120214
End: 3120522
Strand: Reverse
Name: ptsO [C]
Synonym: Saro_2902
Alternate gene names: 87200914
Gene position: 3120522-3120214 (Counterclockwise)
Preceding gene: 87200915
Following gene: 87200913
Centisome position: 87.62
GC content: 66.02
Gene sequence:
>309_bases ATGGCGGAACAGGGCGCGCAGCAGGGATACGTCACTCGCGAAACGGTGACGATCGTCAACCAGCGCGGCCTTCATGCCCG GGCCAGCGCGAAGTTCGTGAATGCCGTGGCCAAGCTGCCCGAGGGCTTCGACGTGACCGTCGCCAAGGATGGGACTGATG CCAATGGCGCCTCGATCCTGGGACTGATGATGCTGGGCGCCGCCCGGGGCGACACTGTCGACGTAGCTGTTGCCGGGCCC GAGGGCGAGGCCGACGCGATCCTGATGAAGCTCACCGGCCTGATCAAGGACGGCTTCGGGGAAGACTGA
Upstream 100 bases:
>100_bases CGCAACTGCATGGGCGTCAAGGAAGCGACTGCGGCGGCGCGCGACGCCGGACGCAACTACATAACGATCGCTTCCGAATT TCTCGGACAGGATGCATGAT
Downstream 100 bases:
>100_bases AACAGCTTGCGGGCGGTTGCCGCCGCGCGCTGGCTGCCGCATGGGGGCGCGATGACCCGCAAGATCATCACCGGCTATTC CAACCCGACGGTAAAGTTCG
Product: HPrNtr
Products: NA
Alternate protein names: Phosphotransferase System Phosphocarrier Protein HPr; HPrNtr; Phosphocarrier HPr Family; HPr Family Phosphocarrier Protein; PTS System Phosphocarrier Protein HPr; Phosphotransferase System HPr; Phosphocarrier Protein Hpr; Phosphocarrier HPr Transmembrane Protein; Phosphocarrier Protein; Phosphotransferase System; Phosphoadenosine Phosphosulfate Reductase; Phosphotransferas; PTS HPr-Related Protein; Phosphocarrier Protein NPr; Phosphoryl Transfer System HPr; Phosphocarrier Protein HPr Protein
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MAEQGAQQGYVTRETVTIVNQRGLHARASAKFVNAVAKLPEGFDVTVAKDGTDANGASILGLMMLGAARGDTVDVAVAGP EGEADAILMKLTGLIKDGFGED
Sequences:
>Translated_102_residues MAEQGAQQGYVTRETVTIVNQRGLHARASAKFVNAVAKLPEGFDVTVAKDGTDANGASILGLMMLGAARGDTVDVAVAGP EGEADAILMKLTGLIKDGFGED >Mature_101_residues AEQGAQQGYVTRETVTIVNQRGLHARASAKFVNAVAKLPEGFDVTVAKDGTDANGASILGLMMLGAARGDTVDVAVAGPE GEADAILMKLTGLIKDGFGED
Specific function: Seems To Have A Role In Linking Carbon And Nitrogen Assimilation. Probably Acts In A Regulatory Capacity And Could Control The State Of Phosphorylation Of Iia-Ntr (Ptsn). [C]
COG id: COG1925
COG function: function code G; Phosphotransferase system, HPr-related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10462; Mature: 10331
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00369 PTS_HPR_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQGAQQGYVTRETVTIVNQRGLHARASAKFVNAVAKLPEGFDVTVAKDGTDANGASIL CCCCCCCCCCEEEHEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHH GLMMLGAARGDTVDVAVAGPEGEADAILMKLTGLIKDGFGED HHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AEQGAQQGYVTRETVTIVNQRGLHARASAKFVNAVAKLPEGFDVTVAKDGTDANGASIL CCCCCCCCCEEEHEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHH GLMMLGAARGDTVDVAVAGPEGEADAILMKLTGLIKDGFGED HHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA