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The map label for this gene is ssb [H]

Identifier: 87200861

GI number: 87200861

Start: 3074150

End: 3074701

Strand: Reverse

Name: ssb [H]

Synonym: Saro_2848

Alternate gene names: 87200861

Gene position: 3074701-3074150 (Counterclockwise)

Preceding gene: 87200862

Following gene: 87200858

Centisome position: 86.33

GC content: 67.57

Gene sequence:

>552_bases
ATGGCAGGCAGCGTCAACAAGGTTATCCTCGTCGGCAATCTCGGGGCCGACCCGGAAATCAAGAGCTTCCAGAACGGGGG
CCGCATCGCCAATCTGCGCATCGCGACCTCGGAAAGCTGGAAGGACCGCGCCACCGGCGAAAAGAAGGAGCGCACCGAGT
GGCACTCCGTCGTGATCAACTCCGACGGTCTGGTCGGCGTGGTCGAACGCTTCCTGCGCAAGGGCTCGAAGGTCTACATC
GAAGGTCAGCTTCGCACCCGCAAGTGGCAGGACCAGTCCGGCAATGACCGCTACACCACCGAAATCTCGGTTGGCGGCAT
GGGTGGCGTGCTGACCATGCTCGATGGTTCGGGCGGCGCTGGCGGCGGTAGCGGTGGTGGTGGCCGCTCGTCGGGCGGTG
GCTGGAACGAAGGCGGTTCCTCGGGCGGTGGCGGCTTCGGCGGCGGTTCGCGCGGCGGCTCGTCCGGCGGTGGTTCGGGT
GGCGGCTGGAACCAGGGCGGCGGCAGCGGCGGCGGCTTCGGCGACGACCTCGACGACGACATCCCGTTCTGA

Upstream 100 bases:

>100_bases
TGAGCCGGTGCGCTCGGCTGTGGAAACGGCGGCGAGGTGACTCGCCGCACCGAGCCCCCATGCGCTAGGCAAGCCGTCAA
ATCTAAAGGAACGTGATTCG

Downstream 100 bases:

>100_bases
CGACTTGCGGGGCATCGCCCCCGGCAACCTGAATCTCCCCTCCCGCCTGCGGGAGGGGCTGGGGGAGGGCAAGTTGCCTC
GCCCCCGCTCTTGCGAAGCC

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MAGSVNKVILVGNLGADPEIKSFQNGGRIANLRIATSESWKDRATGEKKERTEWHSVVINSDGLVGVVERFLRKGSKVYI
EGQLRTRKWQDQSGNDRYTTEISVGGMGGVLTMLDGSGGAGGGSGGGGRSSGGGWNEGGSSGGGGFGGGSRGGSSGGGSG
GGWNQGGGSGGGFGDDLDDDIPF

Sequences:

>Translated_183_residues
MAGSVNKVILVGNLGADPEIKSFQNGGRIANLRIATSESWKDRATGEKKERTEWHSVVINSDGLVGVVERFLRKGSKVYI
EGQLRTRKWQDQSGNDRYTTEISVGGMGGVLTMLDGSGGAGGGSGGGGRSSGGGWNEGGSSGGGGFGGGSRGGSSGGGSG
GGWNQGGGSGGGFGDDLDDDIPF
>Mature_182_residues
AGSVNKVILVGNLGADPEIKSFQNGGRIANLRIATSESWKDRATGEKKERTEWHSVVINSDGLVGVVERFLRKGSKVYIE
GQLRTRKWQDQSGNDRYTTEISVGGMGGVLTMLDGSGGAGGGSGGGGRSSGGGWNEGGSSGGGGFGGGSRGGSSGGGSGG
GWNQGGGSGGGFGDDLDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=182, Percent_Identity=51.6483516483517, Blast_Score=157, Evalue=5e-40,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18318; Mature: 18187

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGSVNKVILVGNLGADPEIKSFQNGGRIANLRIATSESWKDRATGEKKERTEWHSVVIN
CCCCCCEEEEEECCCCCCCCHHHCCCCEEEEEEEECCCCCCHHCCCCHHHCCCEEEEEEC
SDGLVGVVERFLRKGSKVYIEGQLRTRKWQDQSGNDRYTTEISVGGMGGVLTMLDGSGGA
CCCHHHHHHHHHHCCCEEEEECCEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCC
GGGSGGGGRSSGGGWNEGGSSGGGGFGGGSRGGSSGGGSGGGWNQGGGSGGGFGDDLDDD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IPF
CCC
>Mature Secondary Structure 
AGSVNKVILVGNLGADPEIKSFQNGGRIANLRIATSESWKDRATGEKKERTEWHSVVIN
CCCCCEEEEEECCCCCCCCHHHCCCCEEEEEEEECCCCCCHHCCCCHHHCCCEEEEEEC
SDGLVGVVERFLRKGSKVYIEGQLRTRKWQDQSGNDRYTTEISVGGMGGVLTMLDGSGGA
CCCHHHHHHHHHHCCCEEEEECCEECCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCC
GGGSGGGGRSSGGGWNEGGSSGGGGFGGGSRGGSSGGGSGGGWNQGGGSGGGFGDDLDDD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IPF
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430; 10503543 [H]