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The map label for this gene is yrbE [C]

Identifier: 87200858

GI number: 87200858

Start: 3069304

End: 3070422

Strand: Reverse

Name: yrbE [C]

Synonym: Saro_2845

Alternate gene names: 87200858

Gene position: 3070422-3069304 (Counterclockwise)

Preceding gene: 87200861

Following gene: 87200857

Centisome position: 86.21

GC content: 65.59

Gene sequence:

>1119_bases
ATGCGGGCATTGACCGAATTTGAGCTGACGCCTGCCGGGCAGGGGGCAGGGGCGACTCTCGCGTTCAGCGGGCCCATGAC
CGTGTCCTCGCTCGGCCTGACCGACCAGCGGCTGCGCCACATCACCGATCCCGTCGCGCGGATAGACCTGTCGGCGGTCA
CCGCGATGGACACCGTCGGCGCGTGGACGGTCTGGCGCCTGTCGCGCGACACCGGGGCCGAGATCGTCGCGTGCAGCGAA
GAGGCGCAGAAGCTGGTCGACGCGATCAGCAAGGCCGATTCCAACGCCCACTCGATCGAACCGCCGCGCCTCCCGCTATT
TCAGCGCGTGCCCGAAAAGGTCGGCGATGCGATGATCGGCCTGGGCCTTGGCGCGGTGCAGGTGCTGGGCTTCCTGGGCC
AGGTGATCCTCGCCATCGGCACGCTGGTCCGCCATCCCTCGCGCTTCCGGATGAAGGCGCTGGTCCACCAGATGGAGCTG
GTCGGCGTCAACGCACTGGCGATCATCGGACTGATGAGCTTCCTCGTCGGCATCGTCATCGCCCAGCAGGGCGCGGTGCA
GCTTCGCCAGTTCGGGGCCGAAATCTACACCGTCAATCTCGTCGGTCGCCTGACATTGCGCGAACTCGGCGTGCTGATGA
CCGCGATCATGGTCGCGGGCCGCTCGGGCTCGGCCTTTGCCGCGCAGCTCGGCACGATGAAGCTGACCGAAGAAGTCGAT
GCCATGCGCACGATCGGCGTTTCGCCGATGGAAGCGCTGGTCGTGCCGCGCATTCTCGCCACGATGGTGATGATGCCGTT
GCTCGGGTTCTACTCGGCCTTCATCGGCATCATCGGCGGCGCGTTCCTGTCCAGCCTTACCCTAGGCATTCCCTTCTTCA
CCTTCCTTGCGCGGATCCAGGAAGTCGTACCTCTGCACGACGTGTGGGTCGGCATCACCAAGGCTCCGGTCTTCGGCCTG
ATCGTGGCTGTCGCGGGGTGCTATCAGGGCATGCAGGTCAAGACCAATGCCGAGGAAGTCGGCACGCGCACCACGGCGGC
GGTCGTCATGGCGATCTTCATGGTGATCGTGCTCGACGCCTTCTTCGCCGTGTTCTTCACCGAGATCGGCTGGGGCTGA

Upstream 100 bases:

>100_bases
CGGCGCGGCGGCCTCGGGGGAACCGCAAGGGCCGTTCCACCGTTACGGCGCGTGTCATGCACTTGTCGCCTCGCCAGATT
TCCCCCATGAAGCGGGCAAG

Downstream 100 bases:

>100_bases
TGGCGCAGGCACCCGTCGCTCCCACGCACTCGCCCGAAGAGCTGCCCGAACTGCCCGAGGCGTTCGACGGCAAGTTCCCG
ATCCGCGTGCGCGGCGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MRALTEFELTPAGQGAGATLAFSGPMTVSSLGLTDQRLRHITDPVARIDLSAVTAMDTVGAWTVWRLSRDTGAEIVACSE
EAQKLVDAISKADSNAHSIEPPRLPLFQRVPEKVGDAMIGLGLGAVQVLGFLGQVILAIGTLVRHPSRFRMKALVHQMEL
VGVNALAIIGLMSFLVGIVIAQQGAVQLRQFGAEIYTVNLVGRLTLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD
AMRTIGVSPMEALVVPRILATMVMMPLLGFYSAFIGIIGGAFLSSLTLGIPFFTFLARIQEVVPLHDVWVGITKAPVFGL
IVAVAGCYQGMQVKTNAEEVGTRTTAAVVMAIFMVIVLDAFFAVFFTEIGWG

Sequences:

>Translated_372_residues
MRALTEFELTPAGQGAGATLAFSGPMTVSSLGLTDQRLRHITDPVARIDLSAVTAMDTVGAWTVWRLSRDTGAEIVACSE
EAQKLVDAISKADSNAHSIEPPRLPLFQRVPEKVGDAMIGLGLGAVQVLGFLGQVILAIGTLVRHPSRFRMKALVHQMEL
VGVNALAIIGLMSFLVGIVIAQQGAVQLRQFGAEIYTVNLVGRLTLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD
AMRTIGVSPMEALVVPRILATMVMMPLLGFYSAFIGIIGGAFLSSLTLGIPFFTFLARIQEVVPLHDVWVGITKAPVFGL
IVAVAGCYQGMQVKTNAEEVGTRTTAAVVMAIFMVIVLDAFFAVFFTEIGWG
>Mature_372_residues
MRALTEFELTPAGQGAGATLAFSGPMTVSSLGLTDQRLRHITDPVARIDLSAVTAMDTVGAWTVWRLSRDTGAEIVACSE
EAQKLVDAISKADSNAHSIEPPRLPLFQRVPEKVGDAMIGLGLGAVQVLGFLGQVILAIGTLVRHPSRFRMKALVHQMEL
VGVNALAIIGLMSFLVGIVIAQQGAVQLRQFGAEIYTVNLVGRLTLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD
AMRTIGVSPMEALVVPRILATMVMMPLLGFYSAFIGIIGGAFLSSLTLGIPFFTFLARIQEVVPLHDVWVGITKAPVFGL
IVAVAGCYQGMQVKTNAEEVGTRTTAAVVMAIFMVIVLDAFFAVFFTEIGWG

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=248, Percent_Identity=30.6451612903226, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 39606; Mature: 39606

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALTEFELTPAGQGAGATLAFSGPMTVSSLGLTDQRLRHITDPVARIDLSAVTAMDTVG
CCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHCC
AWTVWRLSRDTGAEIVACSEEAQKLVDAISKADSNAHSIEPPRLPLFQRVPEKVGDAMIG
CCEEEEECCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCHHHHH
LGLGAVQVLGFLGQVILAIGTLVRHPSRFRMKALVHQMELVGVNALAIIGLMSFLVGIVI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
AQQGAVQLRQFGAEIYTVNLVGRLTLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD
HCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHH
AMRTIGVSPMEALVVPRILATMVMMPLLGFYSAFIGIIGGAFLSSLTLGIPFFTFLARIQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVVPLHDVWVGITKAPVFGLIVAVAGCYQGMQVKTNAEEVGTRTTAAVVMAIFMVIVLDA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHCCHHHHHHHHHHHHHHHHHH
FFAVFFTEIGWG
HHHHHHHHHCCC
>Mature Secondary Structure
MRALTEFELTPAGQGAGATLAFSGPMTVSSLGLTDQRLRHITDPVARIDLSAVTAMDTVG
CCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHCC
AWTVWRLSRDTGAEIVACSEEAQKLVDAISKADSNAHSIEPPRLPLFQRVPEKVGDAMIG
CCEEEEECCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCHHHHH
LGLGAVQVLGFLGQVILAIGTLVRHPSRFRMKALVHQMELVGVNALAIIGLMSFLVGIVI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
AQQGAVQLRQFGAEIYTVNLVGRLTLRELGVLMTAIMVAGRSGSAFAAQLGTMKLTEEVD
HCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHH
AMRTIGVSPMEALVVPRILATMVMMPLLGFYSAFIGIIGGAFLSSLTLGIPFFTFLARIQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVVPLHDVWVGITKAPVFGLIVAVAGCYQGMQVKTNAEEVGTRTTAAVVMAIFMVIVLDA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHCCHHHHHHHHHHHHHHHHHH
FFAVFFTEIGWG
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]