| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is feoB [H]
Identifier: 87200862
GI number: 87200862
Start: 3074799
End: 3076655
Strand: Reverse
Name: feoB [H]
Synonym: Saro_2849
Alternate gene names: 87200862
Gene position: 3076655-3074799 (Counterclockwise)
Preceding gene: 87200863
Following gene: 87200861
Centisome position: 86.38
GC content: 67.69
Gene sequence:
>1857_bases ATGAGCCGGATGCCCACCGTCGCCGCGCTCGTCGGCAATCCCAACGCGGGCAAGAGCGCACTGTTCAACGCACTTACCGG CGCGCGCCAGAAGATCGCCAACTATCCCGGCGTCACGGTCGAACGGAAAGCCGGTCGCCTGCTGCTCCCCTCGGGCGAGC CGGTCGAACTGGTCGACCTTCCCGGTTCCTACGGCCTCGAGGCGACAAGCCCGGACGAGGAAGTCACCCGCAAGGTCATC ATGGGCGAGCAGGAAGGCCAGGCGCGGCCGGACGTCATCGTGCTCGTGCTCGACAGCTCGAATCTCGAACAGCATCTGGT CTTCGCGCAGGAAGTGCTCGAACTGGGCCGCCCGACGGTGGTTGCGCTCAACATGGTCGACCTGGCCGAGCGCGACGGGC TGGTCATCGATCCGTCGTCCTTGCAAGAGGCGCTTGGCGTGCCCGTCATCCCGACGGTAGCGGTGCGCCGCCGCGGTCTT GCCGAACTGGCCGCTGCCATCGCCGAGGCGCGCGACCGGGCGCAGGCCCACGAAGCCGCGCCGCGTCCGCACGTCACGCT GCCCGAACGGCGCATGATCGCGCACGAGATCGCCAATGGCGCGATCCTTTCGGAAACCGCCAAGCACCGCATCCATGCAC GCATGGACAAGGTCCTGCTGCATCCCTGGCTCGGGCCACCGATCCTGTTCGCGCTGCTCTTCGTGGTTTTCCAGGCGGTG TTCAGCTGGGCCACGCCTTTTGCCGATGCGCTCGACGGCGCGGTCTCGGCGCTCGGCGATCTGGTCAAGGCCAATGTCGC CCCCAGCCTCGGCCGCGACCTGCTGACGGATGGCGTGATCGCGGGCGTGGGCTCGGTCATCGTGTTCCTGCCGCAGATCG TCATCCTGTTCTTCTTCATCCTGACGATGGAGGCGACCGGCTACATGGCCCGCGCCGCCTTCCTGATGGACCGGATGATG GCGGGCGTCGGGCTTTCCGGCCGCAGCTTCATCCCGCTCCTGTCCAGCTTCGCCTGCGCCATTCCCGGCATCATGGCGAC GCGCTCCATCGCCGACCCCAAGGACCGGCTGACGACGATCCTGATCGCCCCGATGATGACCTGTTCGGCGCGCCTGCCGG TCTATGCCGTCATCATCGCCGCGTTCATCCCCAACACTCGCGTCGGTCCCGGCTTCGGGCTTCAGGGGCTGGTGCTGTTC TGCCTCTATGTCGCCGGCATCGTCGGCGCGATGGTCGTGGCGCTCGTCCTGCGCCGCTCGGTCACCAAGGGCGCGGCTTC GGGCTTCATCATGGAACTGCCCAAGTACCAGCTCCCCACGGTCAAGGACCTCGCGCTCGGCCTGTGGCAGCGCGCGTGGA TCTTCCTGCGCCGCGCGGGCACGATGATCTTCACGGTCACCGTCGTGCTGTGGCTTCTGCTCAACTTCCCGCGCGCCGAA CCGGGGCAGGACCAGGTCAATGCCTCGATCGCCGGCACGCTGGCGAATGGCCTCTCCGTCGTGCTCGAACCCATCGGCTT CAACCGTGACATGAGCCTCGCGATCATCCCCGCCATGGCCGCGCGCGAAGTCGCGGTCAGCTCGCTCGCCACGACCTATG CGGTCAGCGCGGCGGACGAGGATCAGGCCGCGATGGCGCTCGGCGACCAGCTCAAGTCGCGCTGGACCCTGCCGATGGCG CTGGCCTTCCTGGCGTGGTTCGTCTTCGCGCCGCAGTGCCTTTCGACCATCGCCGTCGCCCGGCGCGAGACGAACGGCTG GAAATGGCCCGCCTTCATGCTCGCCTACCTTTTCGCGCTCGCCTATGTGGCTGCCGGCGTGACCTACTGGTCCGCGATGG CCGCCGGTTTGGGCTGA
Upstream 100 bases:
>100_bases GCGATCCGCTGGCGGTGGAGATCGGCCGCATGACTGTCGCCATCCGCCGCGTCCACGCCCGCGCGATGCATGTCGAACCC TTCGACCGGGGTGCCGCGGC
Downstream 100 bases:
>100_bases GCCGGTGCGCTCGGCTGTGGAAACGGCGGCGAGGTGACTCGCCGCACCGAGCCCCCATGCGCTAGGCAAGCCGTCAAATC TAAAGGAACGTGATTCGATG
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 618; Mature: 617
Protein sequence:
>618_residues MSRMPTVAALVGNPNAGKSALFNALTGARQKIANYPGVTVERKAGRLLLPSGEPVELVDLPGSYGLEATSPDEEVTRKVI MGEQEGQARPDVIVLVLDSSNLEQHLVFAQEVLELGRPTVVALNMVDLAERDGLVIDPSSLQEALGVPVIPTVAVRRRGL AELAAAIAEARDRAQAHEAAPRPHVTLPERRMIAHEIANGAILSETAKHRIHARMDKVLLHPWLGPPILFALLFVVFQAV FSWATPFADALDGAVSALGDLVKANVAPSLGRDLLTDGVIAGVGSVIVFLPQIVILFFFILTMEATGYMARAAFLMDRMM AGVGLSGRSFIPLLSSFACAIPGIMATRSIADPKDRLTTILIAPMMTCSARLPVYAVIIAAFIPNTRVGPGFGLQGLVLF CLYVAGIVGAMVVALVLRRSVTKGAASGFIMELPKYQLPTVKDLALGLWQRAWIFLRRAGTMIFTVTVVLWLLLNFPRAE PGQDQVNASIAGTLANGLSVVLEPIGFNRDMSLAIIPAMAAREVAVSSLATTYAVSAADEDQAAMALGDQLKSRWTLPMA LAFLAWFVFAPQCLSTIAVARRETNGWKWPAFMLAYLFALAYVAAGVTYWSAMAAGLG
Sequences:
>Translated_618_residues MSRMPTVAALVGNPNAGKSALFNALTGARQKIANYPGVTVERKAGRLLLPSGEPVELVDLPGSYGLEATSPDEEVTRKVI MGEQEGQARPDVIVLVLDSSNLEQHLVFAQEVLELGRPTVVALNMVDLAERDGLVIDPSSLQEALGVPVIPTVAVRRRGL AELAAAIAEARDRAQAHEAAPRPHVTLPERRMIAHEIANGAILSETAKHRIHARMDKVLLHPWLGPPILFALLFVVFQAV FSWATPFADALDGAVSALGDLVKANVAPSLGRDLLTDGVIAGVGSVIVFLPQIVILFFFILTMEATGYMARAAFLMDRMM AGVGLSGRSFIPLLSSFACAIPGIMATRSIADPKDRLTTILIAPMMTCSARLPVYAVIIAAFIPNTRVGPGFGLQGLVLF CLYVAGIVGAMVVALVLRRSVTKGAASGFIMELPKYQLPTVKDLALGLWQRAWIFLRRAGTMIFTVTVVLWLLLNFPRAE PGQDQVNASIAGTLANGLSVVLEPIGFNRDMSLAIIPAMAAREVAVSSLATTYAVSAADEDQAAMALGDQLKSRWTLPMA LAFLAWFVFAPQCLSTIAVARRETNGWKWPAFMLAYLFALAYVAAGVTYWSAMAAGLG >Mature_617_residues SRMPTVAALVGNPNAGKSALFNALTGARQKIANYPGVTVERKAGRLLLPSGEPVELVDLPGSYGLEATSPDEEVTRKVIM GEQEGQARPDVIVLVLDSSNLEQHLVFAQEVLELGRPTVVALNMVDLAERDGLVIDPSSLQEALGVPVIPTVAVRRRGLA ELAAAIAEARDRAQAHEAAPRPHVTLPERRMIAHEIANGAILSETAKHRIHARMDKVLLHPWLGPPILFALLFVVFQAVF SWATPFADALDGAVSALGDLVKANVAPSLGRDLLTDGVIAGVGSVIVFLPQIVILFFFILTMEATGYMARAAFLMDRMMA GVGLSGRSFIPLLSSFACAIPGIMATRSIADPKDRLTTILIAPMMTCSARLPVYAVIIAAFIPNTRVGPGFGLQGLVLFC LYVAGIVGAMVVALVLRRSVTKGAASGFIMELPKYQLPTVKDLALGLWQRAWIFLRRAGTMIFTVTVVLWLLLNFPRAEP GQDQVNASIAGTLANGLSVVLEPIGFNRDMSLAIIPAMAAREVAVSSLATTYAVSAADEDQAAMALGDQLKSRWTLPMAL AFLAWFVFAPQCLSTIAVARRETNGWKWPAFMLAYLFALAYVAAGVTYWSAMAAGLG
Specific function: It seems that the Fe(2+) uptake in C.jejuni cannot be attributed to feoB [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=628, Percent_Identity=32.9617834394904, Blast_Score=294, Evalue=1e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011642 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 66072; Mature: 65940
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRMPTVAALVGNPNAGKSALFNALTGARQKIANYPGVTVERKAGRLLLPSGEPVELVDL CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCEEEEEC PGSYGLEATSPDEEVTRKVIMGEQEGQARPDVIVLVLDSSNLEQHLVFAQEVLELGRPTV CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEE VALNMVDLAERDGLVIDPSSLQEALGVPVIPTVAVRRRGLAELAAAIAEARDRAQAHEAA EEEEHHHHHCCCCEEECHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC PRPHVTLPERRMIAHEIANGAILSETAKHRIHARMDKVLLHPWLGPPILFALLFVVFQAV CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH FSWATPFADALDGAVSALGDLVKANVAPSLGRDLLTDGVIAGVGSVIVFLPQIVILFFFI HHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTMEATGYMARAAFLMDRMMAGVGLSGRSFIPLLSSFACAIPGIMATRSIADPKDRLTTI HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHH LIAPMMTCSARLPVYAVIIAAFIPNTRVGPGFGLQGLVLFCLYVAGIVGAMVVALVLRRS HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VTKGAASGFIMELPKYQLPTVKDLALGLWQRAWIFLRRAGTMIFTVTVVLWLLLNFPRAE HHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC PGQDQVNASIAGTLANGLSVVLEPIGFNRDMSLAIIPAMAAREVAVSSLATTYAVSAADE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHEECCCC DQAAMALGDQLKSRWTLPMALAFLAWFVFAPQCLSTIAVARRETNGWKWPAFMLAYLFAL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AYVAAGVTYWSAMAAGLG HHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRMPTVAALVGNPNAGKSALFNALTGARQKIANYPGVTVERKAGRLLLPSGEPVELVDL CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCEEEEEC PGSYGLEATSPDEEVTRKVIMGEQEGQARPDVIVLVLDSSNLEQHLVFAQEVLELGRPTV CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEE VALNMVDLAERDGLVIDPSSLQEALGVPVIPTVAVRRRGLAELAAAIAEARDRAQAHEAA EEEEHHHHHCCCCEEECHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC PRPHVTLPERRMIAHEIANGAILSETAKHRIHARMDKVLLHPWLGPPILFALLFVVFQAV CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH FSWATPFADALDGAVSALGDLVKANVAPSLGRDLLTDGVIAGVGSVIVFLPQIVILFFFI HHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTMEATGYMARAAFLMDRMMAGVGLSGRSFIPLLSSFACAIPGIMATRSIADPKDRLTTI HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHH LIAPMMTCSARLPVYAVIIAAFIPNTRVGPGFGLQGLVLFCLYVAGIVGAMVVALVLRRS HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VTKGAASGFIMELPKYQLPTVKDLALGLWQRAWIFLRRAGTMIFTVTVVLWLLLNFPRAE HHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC PGQDQVNASIAGTLANGLSVVLEPIGFNRDMSLAIIPAMAAREVAVSSLATTYAVSAADE CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHEECCCC DQAAMALGDQLKSRWTLPMALAFLAWFVFAPQCLSTIAVARRETNGWKWPAFMLAYLFAL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AYVAAGVTYWSAMAAGLG HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10688204 [H]