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The map label for this gene is yjbQ [C]

Identifier: 87200833

GI number: 87200833

Start: 3043698

End: 3044132

Strand: Direct

Name: yjbQ [C]

Synonym: Saro_2820

Alternate gene names: 87200833

Gene position: 3043698-3044132 (Clockwise)

Preceding gene: 87200832

Following gene: 87200834

Centisome position: 85.46

GC content: 68.05

Gene sequence:

>435_bases
ATGGATTGGCGCATGACATTGCGCCAATCCGCCACCGAACTCCTGATCCCCACCCCCGGCCGGGGCCTGCACGAAATCAC
CCGCGAGGTGACCCGCTGGGTTGCGGGGCAGGGGATGAATACCGGCCTCCTCACCCTGTTCTGCCGCCACACCTCGGCCT
CGCTCACCGTCCAGGAAAACGCCGCCGCCGAAGTGCGCGACGACATCGTCCGCTGGCTCGACCGCGTCGCCCCGGAGGAT
GCGGCCTATGCGCACGACGACGAGGGGCCGGACGACATGCCCGCCCATCTAAAGTCCGTGCTCACCGGCGTCAGCCTTTC
CGTGCCGGTAATCGACGGCCGCCCGGCTTTGGGCACATGGCAGGGCATCTACCTTTGCGAACACCGCAGGGCGCCCCACC
GGCGCCGCATTACCCTGCACCTGCTGGGCGATTGA

Upstream 100 bases:

>100_bases
TCGTCGACATGATCCCCCGCATCGCCCCGACCGAGGAACTGCAACGCAAGCTCCTCGTCGACAATCCGATGCGGCTCTAC
TGGGCCGACTGATCCGTGGT

Downstream 100 bases:

>100_bases
CGTCCGTTTACCATCCTGACCCGCCGCCAGGGGGACGATCGGGGCGAAGTCGCGTTGCCCGCCGGTCATACTCTTGGTTA
AAATCCTTGCACCCCGACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MDWRMTLRQSATELLIPTPGRGLHEITREVTRWVAGQGMNTGLLTLFCRHTSASLTVQENAAAEVRDDIVRWLDRVAPED
AAYAHDDEGPDDMPAHLKSVLTGVSLSVPVIDGRPALGTWQGIYLCEHRRAPHRRRITLHLLGD

Sequences:

>Translated_144_residues
MDWRMTLRQSATELLIPTPGRGLHEITREVTRWVAGQGMNTGLLTLFCRHTSASLTVQENAAAEVRDDIVRWLDRVAPED
AAYAHDDEGPDDMPAHLKSVLTGVSLSVPVIDGRPALGTWQGIYLCEHRRAPHRRRITLHLLGD
>Mature_144_residues
MDWRMTLRQSATELLIPTPGRGLHEITREVTRWVAGQGMNTGLLTLFCRHTSASLTVQENAAAEVRDDIVRWLDRVAPED
AAYAHDDEGPDDMPAHLKSVLTGVSLSVPVIDGRPALGTWQGIYLCEHRRAPHRRRITLHLLGD

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=132, Percent_Identity=46.2121212121212, Blast_Score=112, Evalue=1e-26,
Organism=Drosophila melanogaster, GI221476594, Length=124, Percent_Identity=43.5483870967742, Blast_Score=113, Evalue=5e-26,
Organism=Drosophila melanogaster, GI221476589, Length=124, Percent_Identity=43.5483870967742, Blast_Score=112, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 16097; Mature: 16097

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWRMTLRQSATELLIPTPGRGLHEITREVTRWVAGQGMNTGLLTLFCRHTSASLTVQEN
CCCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCEEEECCC
AAAEVRDDIVRWLDRVAPEDAAYAHDDEGPDDMPAHLKSVLTGVSLSVPVIDGRPALGTW
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCC
QGIYLCEHRRAPHRRRITLHLLGD
CEEEEECCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MDWRMTLRQSATELLIPTPGRGLHEITREVTRWVAGQGMNTGLLTLFCRHTSASLTVQEN
CCCCHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHEEEECCCCEEEECCC
AAAEVRDDIVRWLDRVAPEDAAYAHDDEGPDDMPAHLKSVLTGVSLSVPVIDGRPALGTW
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCC
QGIYLCEHRRAPHRRRITLHLLGD
CEEEEECCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]